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HG10001828 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10001828
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionDUF1336 domain-containing protein
Genome locationChr11:837284..837604
RNA-Seq ExpressionHG10001828
SyntenyHG10001828
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAB1213284.1 hypothetical protein CJ030_MR5G009621 [Morella rubra]1.1e-1553.19Show/hide
Query:  RRHDRDFWHSRRAFLKSYNFSNGYGRDDGLKGKMKRSMKELNRSTIRMVGGICED-MAKRKLGIRVYRLTISLPSMVFMTVRCFMPTFRNKETT
        R H RDFW +RRAFL SY+FS      +G K K+KRS+KELN     +VG I    M+KR+LGIRVYRLT++LPS+V +T+RCF P    + +T
Subjt:  RRHDRDFWHSRRAFLKSYNFSNGYGRDDGLKGKMKRSMKELNRSTIRMVGGICED-MAKRKLGIRVYRLTISLPSMVFMTVRCFMPTFRNKETT

KAF3958569.1 hypothetical protein CMV_016545 [Castanea mollissima]3.6e-1446.67Show/hide
Query:  HDRDFWHSRRAFLKSYNFSNGYGRDDGLKGKMKRSMKELNRSTIRMVGGICEDMAKRKLGIRVYRLTISLPSMVFMTVRCFMPTFRNKET
        HDRD+W++RRAFL SY+FS     + G K K++RS+KELN     +V  I   M+ RKLGIRVYR T+++ S+V +++RCF P    +++
Subjt:  HDRDFWHSRRAFLKSYNFSNGYGRDDGLKGKMKRSMKELNRSTIRMVGGICEDMAKRKLGIRVYRLTISLPSMVFMTVRCFMPTFRNKET

KGN53119.1 hypothetical protein Csa_015375 [Cucumis sativus]2.5e-4487.5Show/hide
Query:  MQGDEAYRRRHDRDFWHSRRAFLKSYNFSNGYGRDDGLKGKMKRSMKELNRSTIRMVGGICEDMAKRKLGIRVYRLTISLPSMVFMTVRCFMPTFRNKET
        MQGD+A RRRHDRDFWHSR+AFLKSYN SNGY RDDGLKGKMKR+MKELNRST RMVGGICEDMAKRK GIRVYRLTISLPSMVFMTVRCF+P+FRNKE 
Subjt:  MQGDEAYRRRHDRDFWHSRRAFLKSYNFSNGYGRDDGLKGKMKRSMKELNRSTIRMVGGICEDMAKRKLGIRVYRLTISLPSMVFMTVRCFMPTFRNKET

Query:  TLHS
        TL +
Subjt:  TLHS

XP_023920324.1 uncharacterized protein LOC112031845 [Quercus suber]2.5e-1548.91Show/hide
Query:  RRHDRDFWHSRRAFLKSYNFSNGYGRDDGLKGKMKRSMKELNRSTIRMVGGICEDMAKRKLGIRVYRLTISLPSMVFMTVRCFMPTFRNKET
        RRHDRD+W++RRAFL SY+FS     ++G K K++ S+KELN     +V  I   M+KRKLGIRVYR T++L S+V +++RCF P    +++
Subjt:  RRHDRDFWHSRRAFLKSYNFSNGYGRDDGLKGKMKRSMKELNRSTIRMVGGICEDMAKRKLGIRVYRLTISLPSMVFMTVRCFMPTFRNKET

XP_030940520.1 uncharacterized protein LOC115965432 [Quercus lobata]2.9e-1650Show/hide
Query:  RRHDRDFWHSRRAFLKSYNFSNGYGRDDGLKGKMKRSMKELNRSTIRMVGGICEDMAKRKLGIRVYRLTISLPSMVFMTVRCFMPTFRNKET
        RRHDRD+W++RRAFL SY+FS     ++G K K++RS+KELN     +V  I   M+KRKLGIRVYR T++L S+V +++RCF P    +++
Subjt:  RRHDRDFWHSRRAFLKSYNFSNGYGRDDGLKGKMKRSMKELNRSTIRMVGGICEDMAKRKLGIRVYRLTISLPSMVFMTVRCFMPTFRNKET

TrEMBL top hitse value%identityAlignment
A0A0A0KW75 Uncharacterized protein1.2e-4487.5Show/hide
Query:  MQGDEAYRRRHDRDFWHSRRAFLKSYNFSNGYGRDDGLKGKMKRSMKELNRSTIRMVGGICEDMAKRKLGIRVYRLTISLPSMVFMTVRCFMPTFRNKET
        MQGD+A RRRHDRDFWHSR+AFLKSYN SNGY RDDGLKGKMKR+MKELNRST RMVGGICEDMAKRK GIRVYRLTISLPSMVFMTVRCF+P+FRNKE 
Subjt:  MQGDEAYRRRHDRDFWHSRRAFLKSYNFSNGYGRDDGLKGKMKRSMKELNRSTIRMVGGICEDMAKRKLGIRVYRLTISLPSMVFMTVRCFMPTFRNKET

Query:  TLHS
        TL +
Subjt:  TLHS

A0A5N6L6G3 Uncharacterized protein1.9e-1348.39Show/hide
Query:  RRRHDRDFWHSRRAFLKSYNFSNGYGRDDGLKGKMKRSMKELNRSTIRMVGGICEDMAKRKLGIRVYRLTISLPS-MVFMTVRCFMPTFRNKE
        RRRH R+FW++RR FLKSY FS      +G + K+KR  KELN     +V  I   M++R++GIR YR T++LPS +V +TVRCF P    K+
Subjt:  RRRHDRDFWHSRRAFLKSYNFSNGYGRDDGLKGKMKRSMKELNRSTIRMVGGICEDMAKRKLGIRVYRLTISLPS-MVFMTVRCFMPTFRNKE

A0A6A1VKL6 Uncharacterized protein5.4e-1653.19Show/hide
Query:  RRHDRDFWHSRRAFLKSYNFSNGYGRDDGLKGKMKRSMKELNRSTIRMVGGICED-MAKRKLGIRVYRLTISLPSMVFMTVRCFMPTFRNKETT
        R H RDFW +RRAFL SY+FS      +G K K+KRS+KELN     +VG I    M+KR+LGIRVYRLT++LPS+V +T+RCF P    + +T
Subjt:  RRHDRDFWHSRRAFLKSYNFSNGYGRDDGLKGKMKRSMKELNRSTIRMVGGICED-MAKRKLGIRVYRLTISLPSMVFMTVRCFMPTFRNKETT

A0A7N2MT50 Uncharacterized protein1.4e-1650Show/hide
Query:  RRHDRDFWHSRRAFLKSYNFSNGYGRDDGLKGKMKRSMKELNRSTIRMVGGICEDMAKRKLGIRVYRLTISLPSMVFMTVRCFMPTFRNKET
        RRHDRD+W++RRAFL SY+FS     ++G K K++RS+KELN     +V  I   M+KRKLGIRVYR T++L S+V +++RCF P    +++
Subjt:  RRHDRDFWHSRRAFLKSYNFSNGYGRDDGLKGKMKRSMKELNRSTIRMVGGICEDMAKRKLGIRVYRLTISLPSMVFMTVRCFMPTFRNKET

A0A803Q2Y5 Uncharacterized protein9.1e-1651.69Show/hide
Query:  HD-RDFWHSRRAFLKSYNFSNGYGRDDGLKGKMKRSMKELNRSTIRMVGGICEDMAKRKLGIRVYRLTISLPSMVFMTVRCFMPTFRNK
        HD RDFW SRRAFL SY+ SN    D G KGK+KRS+KELN   +  +  I   +++R+ G+RV+RLT+SLPS + ++VRCF P    K
Subjt:  HD-RDFWHSRRAFLKSYNFSNGYGRDDGLKGKMKRSMKELNRSTIRMVGGICEDMAKRKLGIRVYRLTISLPSMVFMTVRCFMPTFRNK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAAGGTGACGAAGCATATAGGCGTCGTCACGATCGAGACTTCTGGCATTCACGACGTGCATTTTTAAAGAGCTATAACTTCTCCAATGGATATGGAAGAGATGATGG
CTTGAAAGGAAAGATGAAGAGGTCAATGAAAGAGCTTAATAGATCAACTATTCGAATGGTTGGAGGCATTTGTGAAGACATGGCTAAAAGGAAGCTTGGAATTAGGGTTT
ATAGGCTCACAATAAGTCTGCCATCAATGGTTTTTATGACAGTGAGATGTTTTATGCCAACATTTAGGAACAAAGAGACTACACTACACTCATCTGGCTAG
mRNA sequenceShow/hide mRNA sequence
ATGCAAGGTGACGAAGCATATAGGCGTCGTCACGATCGAGACTTCTGGCATTCACGACGTGCATTTTTAAAGAGCTATAACTTCTCCAATGGATATGGAAGAGATGATGG
CTTGAAAGGAAAGATGAAGAGGTCAATGAAAGAGCTTAATAGATCAACTATTCGAATGGTTGGAGGCATTTGTGAAGACATGGCTAAAAGGAAGCTTGGAATTAGGGTTT
ATAGGCTCACAATAAGTCTGCCATCAATGGTTTTTATGACAGTGAGATGTTTTATGCCAACATTTAGGAACAAAGAGACTACACTACACTCATCTGGCTAG
Protein sequenceShow/hide protein sequence
MQGDEAYRRRHDRDFWHSRRAFLKSYNFSNGYGRDDGLKGKMKRSMKELNRSTIRMVGGICEDMAKRKLGIRVYRLTISLPSMVFMTVRCFMPTFRNKETTLHSSG