; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

HG10001831 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10001831
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionATP-dependent DNA helicase 2 subunit KU70
Genome locationChr11:855192..856354
RNA-Seq ExpressionHG10001831
SyntenyHG10001831
Gene Ontology termsGO:0000723 - telomere maintenance (biological process)
GO:0006303 - double-strand break repair via nonhomologous end joining (biological process)
GO:0006310 - DNA recombination (biological process)
GO:0009408 - response to heat (biological process)
GO:0071481 - cellular response to X-ray (biological process)
GO:0032508 - DNA duplex unwinding (biological process)
GO:0071480 - cellular response to gamma radiation (biological process)
GO:0043564 - Ku70:Ku80 complex (cellular component)
GO:0042162 - telomeric DNA binding (molecular function)
GO:0016787 - hydrolase activity (molecular function)
GO:0005524 - ATP binding (molecular function)
GO:0003690 - double-stranded DNA binding (molecular function)
GO:0003684 - damaged DNA binding (molecular function)
GO:0003678 - DNA helicase activity (molecular function)
InterPro domainsIPR036361 - SAP domain superfamily
IPR006165 - Ku70
IPR005160 - Ku70/Ku80 C-terminal arm
IPR003034 - SAP domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6597631.1 ATP-dependent DNA helicase 2 subunit KU70, partial [Cucurbita argyrosperma subsp. sororia]6.7e-6192.42Show/hide
Query:  ALQRHYAVLQALALEEDEMPEVNDETVPDEEGMARPGVVKTLEEFKLSVYGENYVEEEAGKGKVSEASKKRKAIFETASQKCKEYDWADLADNGKLKELS
        ALQRHYAVLQALALEED+MPEVNDET+PDEEGMARPGVVK +EEFKLSVYGENY EEEAGKGKVSEASKKRKA+ E+A+QKCKEYDW DLADNGKLKELS
Subjt:  ALQRHYAVLQALALEEDEMPEVNDETVPDEEGMARPGVVKTLEEFKLSVYGENYVEEEAGKGKVSEASKKRKAIFETASQKCKEYDWADLADNGKLKELS

Query:  VVELKYYLTAHDLPVSGKKEALISRILSHMGK
        VVELKYYLTAHDLPVSGKKEALISRILSHMGK
Subjt:  VVELKYYLTAHDLPVSGKKEALISRILSHMGK

KAG7029073.1 ATP-dependent DNA helicase 2 subunit KU70 [Cucurbita argyrosperma subsp. argyrosperma]5.1e-6193.18Show/hide
Query:  ALQRHYAVLQALALEEDEMPEVNDETVPDEEGMARPGVVKTLEEFKLSVYGENYVEEEAGKGKVSEASKKRKAIFETASQKCKEYDWADLADNGKLKELS
        ALQRHYAVLQALALEED+MPEVNDETVPDEEGMARPGVVK +EEFKLSVYGENY EEEAGKGKVSEASKKRKA+ E+A+QKCKEYDW DLADNGKLKELS
Subjt:  ALQRHYAVLQALALEEDEMPEVNDETVPDEEGMARPGVVKTLEEFKLSVYGENYVEEEAGKGKVSEASKKRKAIFETASQKCKEYDWADLADNGKLKELS

Query:  VVELKYYLTAHDLPVSGKKEALISRILSHMGK
        VVELKYYLTAHDLPVSGKKEALISRILSHMGK
Subjt:  VVELKYYLTAHDLPVSGKKEALISRILSHMGK

XP_004152086.1 ATP-dependent DNA helicase 2 subunit KU70 [Cucumis sativus]3.2e-6397.73Show/hide
Query:  ALQRHYAVLQALALEEDEMPEVNDETVPDEEGMARPGVVKTLEEFKLSVYGENYVEEEAGKGKVSEASKKRKAIFETASQKCKEYDWADLADNGKLKELS
        ALQRHYAVLQALALEEDEMPEVNDETVPDEEGMARPGVVKTLEEFKLSVYGENY EEEAGKGKVSE SKKRKAI ETASQKCKEYDWADLADNGKLKELS
Subjt:  ALQRHYAVLQALALEEDEMPEVNDETVPDEEGMARPGVVKTLEEFKLSVYGENYVEEEAGKGKVSEASKKRKAIFETASQKCKEYDWADLADNGKLKELS

Query:  VVELKYYLTAHDLPVSGKKEALISRILSHMGK
        VVELKYYLTAHDLPVSGKKEALISRILSHMGK
Subjt:  VVELKYYLTAHDLPVSGKKEALISRILSHMGK

XP_022932591.1 ATP-dependent DNA helicase 2 subunit KU70 [Cucurbita moschata]2.5e-6092.42Show/hide
Query:  ALQRHYAVLQALALEEDEMPEVNDETVPDEEGMARPGVVKTLEEFKLSVYGENYVEEEAGKGKVSEASKKRKAIFETASQKCKEYDWADLADNGKLKELS
        ALQRHYAVLQALALEED MPEVNDETVPDEEGMARPGVVK +EEFKLSVYGENY EEEAGKGKVS+ASKKRKA+ E+A+QKCKEYDW DLADNGKLKELS
Subjt:  ALQRHYAVLQALALEEDEMPEVNDETVPDEEGMARPGVVKTLEEFKLSVYGENYVEEEAGKGKVSEASKKRKAIFETASQKCKEYDWADLADNGKLKELS

Query:  VVELKYYLTAHDLPVSGKKEALISRILSHMGK
        VVELKYYLTAHDLPVSGKKEALISRILSHMGK
Subjt:  VVELKYYLTAHDLPVSGKKEALISRILSHMGK

XP_022972033.1 ATP-dependent DNA helicase 2 subunit KU70 [Cucurbita maxima]1.1e-6093.18Show/hide
Query:  ALQRHYAVLQALALEEDEMPEVNDETVPDEEGMARPGVVKTLEEFKLSVYGENYVEEEAGKGKVSEASKKRKAIFETASQKCKEYDWADLADNGKLKELS
        ALQRHYAVLQALALEED+MPEVNDETVPDEEGMARPGVVK LEEFKLSVYGENY EEEAGKGKVSEASKKRKA+ E+A+QKCKEYDW DLADNGKLKELS
Subjt:  ALQRHYAVLQALALEEDEMPEVNDETVPDEEGMARPGVVKTLEEFKLSVYGENYVEEEAGKGKVSEASKKRKAIFETASQKCKEYDWADLADNGKLKELS

Query:  VVELKYYLTAHDLPVSGKKEALISRILSHMGK
        VVELKYYLTAHDLPVSGKKEALI RILSHMGK
Subjt:  VVELKYYLTAHDLPVSGKKEALISRILSHMGK

TrEMBL top hitse value%identityAlignment
A0A0A0KXI0 SAP domain-containing protein1.6e-6397.73Show/hide
Query:  ALQRHYAVLQALALEEDEMPEVNDETVPDEEGMARPGVVKTLEEFKLSVYGENYVEEEAGKGKVSEASKKRKAIFETASQKCKEYDWADLADNGKLKELS
        ALQRHYAVLQALALEEDEMPEVNDETVPDEEGMARPGVVKTLEEFKLSVYGENY EEEAGKGKVSE SKKRKAI ETASQKCKEYDWADLADNGKLKELS
Subjt:  ALQRHYAVLQALALEEDEMPEVNDETVPDEEGMARPGVVKTLEEFKLSVYGENYVEEEAGKGKVSEASKKRKAIFETASQKCKEYDWADLADNGKLKELS

Query:  VVELKYYLTAHDLPVSGKKEALISRILSHMGK
        VVELKYYLTAHDLPVSGKKEALISRILSHMGK
Subjt:  VVELKYYLTAHDLPVSGKKEALISRILSHMGK

A0A1S3BXF2 ATP-dependent DNA helicase 2 subunit KU701.2e-6095.49Show/hide
Query:  ALQRHYAVLQALALEEDEMPEVNDETVPDEEGMARPGVVKTLEEFKLSVYGENY-VEEEAGKGKVSEASKKRKAIFETASQKCKEYDWADLADNGKLKEL
        ALQRHYAVLQALALEEDEMPEVNDETVPDEEGMARPGVVKTLEEFKLSVYGENY  EEEAGKGKVSE SKKRKAI E ASQKCKEYDWADLADNGKLKEL
Subjt:  ALQRHYAVLQALALEEDEMPEVNDETVPDEEGMARPGVVKTLEEFKLSVYGENY-VEEEAGKGKVSEASKKRKAIFETASQKCKEYDWADLADNGKLKEL

Query:  SVVELKYYLTAHDLPVSGKKEALISRILSHMGK
        SVVELKYYLTA+DLPVSGKKEALISRILSHMGK
Subjt:  SVVELKYYLTAHDLPVSGKKEALISRILSHMGK

A0A5A7TSU2 ATP-dependent DNA helicase 2 subunit KU701.2e-6095.49Show/hide
Query:  ALQRHYAVLQALALEEDEMPEVNDETVPDEEGMARPGVVKTLEEFKLSVYGENY-VEEEAGKGKVSEASKKRKAIFETASQKCKEYDWADLADNGKLKEL
        ALQRHYAVLQALALEEDEMPEVNDETVPDEEGMARPGVVKTLEEFKLSVYGENY  EEEAGKGKVSE SKKRKAI E ASQKCKEYDWADLADNGKLKEL
Subjt:  ALQRHYAVLQALALEEDEMPEVNDETVPDEEGMARPGVVKTLEEFKLSVYGENY-VEEEAGKGKVSEASKKRKAIFETASQKCKEYDWADLADNGKLKEL

Query:  SVVELKYYLTAHDLPVSGKKEALISRILSHMGK
        SVVELKYYLTA+DLPVSGKKEALISRILSHMGK
Subjt:  SVVELKYYLTAHDLPVSGKKEALISRILSHMGK

A0A6J1EWS3 ATP-dependent DNA helicase 2 subunit KU701.2e-6092.42Show/hide
Query:  ALQRHYAVLQALALEEDEMPEVNDETVPDEEGMARPGVVKTLEEFKLSVYGENYVEEEAGKGKVSEASKKRKAIFETASQKCKEYDWADLADNGKLKELS
        ALQRHYAVLQALALEED MPEVNDETVPDEEGMARPGVVK +EEFKLSVYGENY EEEAGKGKVS+ASKKRKA+ E+A+QKCKEYDW DLADNGKLKELS
Subjt:  ALQRHYAVLQALALEEDEMPEVNDETVPDEEGMARPGVVKTLEEFKLSVYGENYVEEEAGKGKVSEASKKRKAIFETASQKCKEYDWADLADNGKLKELS

Query:  VVELKYYLTAHDLPVSGKKEALISRILSHMGK
        VVELKYYLTAHDLPVSGKKEALISRILSHMGK
Subjt:  VVELKYYLTAHDLPVSGKKEALISRILSHMGK

A0A6J1I8Q2 ATP-dependent DNA helicase 2 subunit KU705.5e-6193.18Show/hide
Query:  ALQRHYAVLQALALEEDEMPEVNDETVPDEEGMARPGVVKTLEEFKLSVYGENYVEEEAGKGKVSEASKKRKAIFETASQKCKEYDWADLADNGKLKELS
        ALQRHYAVLQALALEED+MPEVNDETVPDEEGMARPGVVK LEEFKLSVYGENY EEEAGKGKVSEASKKRKA+ E+A+QKCKEYDW DLADNGKLKELS
Subjt:  ALQRHYAVLQALALEEDEMPEVNDETVPDEEGMARPGVVKTLEEFKLSVYGENYVEEEAGKGKVSEASKKRKAIFETASQKCKEYDWADLADNGKLKELS

Query:  VVELKYYLTAHDLPVSGKKEALISRILSHMGK
        VVELKYYLTAHDLPVSGKKEALI RILSHMGK
Subjt:  VVELKYYLTAHDLPVSGKKEALISRILSHMGK

SwissProt top hitse value%identityAlignment
O93257 X-ray repair cross-complementing protein 54.1e-0530.77Show/hide
Query:  LQRHYAVLQALALEEDEMPEVNDETVPDEEGMARPGVVKTLEEFKLSVYGENYVEE--EAGKGKVSEASKKRKAIFETASQKCKEYDWADLADNGKLKEL
        LQ+H+  L+ALAL+  E  +  D T+P  E M+R  +   +EEFK  VY  +Y  E   A + +  +A  +++   E +    + Y       NG L +L
Subjt:  LQRHYAVLQALALEEDEMPEVNDETVPDEEGMARPGVVKTLEEFKLSVYGENYVEE--EAGKGKVSEASKKRKAIFETASQKCKEYDWADLADNGKLKEL

Query:  SVVELKYYLTAHDLPVSGKKEALISRILSH
        +V  LK     + L   GKK+ LI  +  +
Subjt:  SVVELKYYLTAHDLPVSGKKEALISRILSH

Q2MHH3 ATP-dependent DNA helicase II subunit 13.2e-0529.37Show/hide
Query:  ALQRHYAVLQALALEEDEMPEVNDETVPDEEGM-ARPG--VVKTLEEF-----KLSVYG-ENYVEEEAGKGKVSEASKKRKAIFETASQKCKEYDWADLA
        +LQ HY +LQALAL+ED   +  D+T+P    +  R G  V+   +E      K+S +G ++ + E + K + SE        ++    +  E    D+ 
Subjt:  ALQRHYAVLQALALEEDEMPEVNDETVPDEEGM-ARPG--VVKTLEEF-----KLSVYG-ENYVEEEAGKGKVSEASKKRKAIFETASQKCKEYDWADLA

Query:  ----DNGKLKELSVVELKYYLTAHDLPVSGKKEALISRILSHM
              G L +L+V  LK +L AH    +GKK+ L+ R+  ++
Subjt:  ----DNGKLKELSVVELKYYLTAHDLPVSGKKEALISRILSHM

Q54MA9 ATP-dependent DNA helicase ku702.2e-0629.01Show/hide
Query:  LQRHYAVLQALALEEDEMPEVNDETVPDEEGMARPGVVKTLEEFKLSVYGENYVEE-EAGKGKVSEASKKRKAIFETASQKCKEYDWADLADNGKLKELS
        LQ+HYA LQA+ALE D++ E  D   PD + + +  V+ T ++F   ++   Y     +     S +S KR        +     DW D+  +G++ +L+
Subjt:  LQRHYAVLQALALEEDEMPEVNDETVPDEEGMARPGVVKTLEEFKLSVYGENYVEE-EAGKGKVSEASKKRKAIFETASQKCKEYDWADLADNGKLKELS

Query:  VVELKYYLTAHDL-PVSGKKEALISRILSHM
        V +LK +L+  ++ P S  K+A +  ++S++
Subjt:  VVELKYYLTAHDL-PVSGKKEALISRILSHM

Q7F1M0 ATP-dependent DNA helicase 2 subunit KU706.5e-4366.17Show/hide
Query:  ALQRHYAVLQALALEEDEMPEVNDETVPDEEGMARPGVVKTLEEFKLSVYGENYVEEEA-GKGKVSEASKKRKAIFETASQKCKEYDWADLADNGKLKEL
        ALQRHY +L+ALAL EDEMP+V DET+PDEEG+ARP VVK +EEFK SVYGENY +EEA      + ASKKRKA+ + A++K   ++WA+LAD GKLK++
Subjt:  ALQRHYAVLQALALEEDEMPEVNDETVPDEEGMARPGVVKTLEEFKLSVYGENYVEEEA-GKGKVSEASKKRKAIFETASQKCKEYDWADLADNGKLKEL

Query:  SVVELKYYLTAHDLPVSGKKEALISRILSHMGK
        +VV+LK YL+AH LPVSGKKEAL+SRIL+H+GK
Subjt:  SVVELKYYLTAHDLPVSGKKEALISRILSHMGK

Q9FQ08 ATP-dependent DNA helicase 2 subunit KU701.0e-3259.09Show/hide
Query:  ALQRHYAVLQALALEEDEMPEVNDETVPDEEGMARPGVVKTLEEFKLSVYGENYVEEEAGKGKVSEASKKRKAIFETASQKCKEYDWADLADNGKLKELS
        ALQRHYA+LQA+AL+E+E+ E  DET+PDEEGM RP VVK +E+FK S+YG++  +EE+  G   E SKKRKA          +YD+ +LA  GKLK+L+
Subjt:  ALQRHYAVLQALALEEDEMPEVNDETVPDEEGMARPGVVKTLEEFKLSVYGENYVEEEAGKGKVSEASKKRKAIFETASQKCKEYDWADLADNGKLKELS

Query:  VVELKYYLTAHDLPVSGKKEALISRILSHMGK
        VVELK YLTA++L VSGKKE LI+RIL+H+GK
Subjt:  VVELKYYLTAHDLPVSGKKEALISRILSHMGK

Arabidopsis top hitse value%identityAlignment
AT1G16970.1 KU70 homolog7.4e-3459.09Show/hide
Query:  ALQRHYAVLQALALEEDEMPEVNDETVPDEEGMARPGVVKTLEEFKLSVYGENYVEEEAGKGKVSEASKKRKAIFETASQKCKEYDWADLADNGKLKELS
        ALQRHYA+LQA+AL+E+E+ E  DET+PDEEGM RP VVK +E+FK S+YG++  +EE+  G   E SKKRKA          +YD+ +LA  GKLK+L+
Subjt:  ALQRHYAVLQALALEEDEMPEVNDETVPDEEGMARPGVVKTLEEFKLSVYGENYVEEEAGKGKVSEASKKRKAIFETASQKCKEYDWADLADNGKLKELS

Query:  VVELKYYLTAHDLPVSGKKEALISRILSHMGK
        VVELK YLTA++L VSGKKE LI+RIL+H+GK
Subjt:  VVELKYYLTAHDLPVSGKKEALISRILSHMGK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTATAATGGAAGTCAACTTTCAGCCTTGCAGAGACATTATGCAGTACTGCAGGCTTTAGCCTTGGAAGAAGATGAGATGCCTGAGGTTAATGACGAAACAGTCCCTGA
TGAAGAAGGAATGGCTAGACCTGGGGTCGTAAAGACACTAGAAGAATTCAAACTATCAGTTTATGGGGAAAATTACGTGGAGGAGGAAGCTGGAAAAGGAAAAGTGAGTG
AAGCTTCAAAAAAGAGAAAAGCAATATTTGAGACTGCTTCACAAAAGTGTAAAGAATATGACTGGGCTGACCTTGCAGACAATGGAAAGTTGAAGGAATTGTCGGTTGTC
GAGTTGAAGTATTATTTGACAGCACATGATCTTCCTGTGTCTGGAAAGAAGGAAGCCTTGATAAGCAGGATACTATCACATATGGGAAAGTAA
mRNA sequenceShow/hide mRNA sequence
ATGTATAATGGAAGTCAACTTTCAGCCTTGCAGAGACATTATGCAGTACTGCAGGCTTTAGCCTTGGAAGAAGATGAGATGCCTGAGGTTAATGACGAAACAGTCCCTGA
TGAAGAAGGAATGGCTAGACCTGGGGTCGTAAAGACACTAGAAGAATTCAAACTATCAGTTTATGGGGAAAATTACGTGGAGGAGGAAGCTGGAAAAGGAAAAGTGAGTG
AAGCTTCAAAAAAGAGAAAAGCAATATTTGAGACTGCTTCACAAAAGTGTAAAGAATATGACTGGGCTGACCTTGCAGACAATGGAAAGTTGAAGGAATTGTCGGTTGTC
GAGTTGAAGTATTATTTGACAGCACATGATCTTCCTGTGTCTGGAAAGAAGGAAGCCTTGATAAGCAGGATACTATCACATATGGGAAAGTAA
Protein sequenceShow/hide protein sequence
MYNGSQLSALQRHYAVLQALALEEDEMPEVNDETVPDEEGMARPGVVKTLEEFKLSVYGENYVEEEAGKGKVSEASKKRKAIFETASQKCKEYDWADLADNGKLKELSVV
ELKYYLTAHDLPVSGKKEALISRILSHMGK