; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

HG10001886 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10001886
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionCyclin
Genome locationChr11:1395357..1395716
RNA-Seq ExpressionHG10001886
SyntenyHG10001886
Gene Ontology termsGO:0000079 - regulation of cyclin-dependent protein serine/threonine kinase activity (biological process)
GO:0016301 - kinase activity (molecular function)
GO:0019901 - protein kinase binding (molecular function)
InterPro domainsIPR012389 - Cyclin P/U
IPR013763 - Cyclin-like
IPR013922 - Cyclin PHO80-like
IPR036915 - Cyclin-like superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0044685.1 cyclin-U4-1-like [Cucumis melo var. makuwa]9.1e-3574.56Show/hide
Query:  MVGIPKVISFLSSVLQRVSESNDKRRVRERERDEERKMISGFYGLSRPSISINNYLERIFKYANCSPSCFVVAYVYLDRFVHNH--PSFPIDSFNVHRLL
        MVGIPKVI++LSSVLQRVSESND+   R      +R   SGF G+SRPSISI +YLERIFKYANCSPSCFVVAYVYL RF+HNH   +F IDSFNVHRLL
Subjt:  MVGIPKVISFLSSVLQRVSESNDKRRVRERERDEERKMISGFYGLSRPSISINNYLERIFKYANCSPSCFVVAYVYLDRFVHNH--PSFPIDSFNVHRLL

Query:  ITSVLLSAKFLDDL
        ITSVL+SAKF DDL
Subjt:  ITSVLLSAKFLDDL

XP_008453846.1 PREDICTED: cyclin-U4-1-like [Cucumis melo]1.1e-3573.55Show/hide
Query:  MGELEEIMVGIPKVISFLSSVLQRVSESNDKRRVRERERDEERKMISGFYGLSRPSISINNYLERIFKYANCSPSCFVVAYVYLDRFVHNH--PSFPIDS
        +GE EE MVGIPKVI++LSSVLQRVSESND+   R      +R   SGF G+SRPSISI +YLERIFKYANCSPSCFVVAYVYL RF+HNH   +F IDS
Subjt:  MGELEEIMVGIPKVISFLSSVLQRVSESNDKRRVRERERDEERKMISGFYGLSRPSISINNYLERIFKYANCSPSCFVVAYVYLDRFVHNH--PSFPIDS

Query:  FNVHRLLITSVLLSAKFLDDL
        FNVHRLLITSVL+SAKF DDL
Subjt:  FNVHRLLITSVLLSAKFLDDL

XP_022140882.1 cyclin-U4-1-like [Momordica charantia]1.6e-3468.91Show/hide
Query:  MGELEEIMVGIPKVISFLSSVLQRVSESNDKRRVRERERDEERKMISGFYGLSRPSISINNYLERIFKYANCSPSCFVVAYVYLDRFVHNHPSFPIDSFN
        M E  + +  IP+VI+FLSS+LQRVSESND           +   IS F+GL+RP+ISI++YL+RIFKYANCSPSCFVVAYVYLDRFV  HPS PIDSFN
Subjt:  MGELEEIMVGIPKVISFLSSVLQRVSESNDKRRVRERERDEERKMISGFYGLSRPSISINNYLERIFKYANCSPSCFVVAYVYLDRFVHNHPSFPIDSFN

Query:  VHRLLITSVLLSAKFLDDL
        VHRLLITSVL SAKFLDDL
Subjt:  VHRLLITSVLLSAKFLDDL

XP_027336347.1 cyclin-U4-1-like [Abrus precatorius]1.2e-3465.55Show/hide
Query:  MGELEEIMVGIPKVISFLSSVLQRVSESNDKRRVRERERDEERKMISGFYGLSRPSISINNYLERIFKYANCSPSCFVVAYVYLDRFVHNHPSFPIDSFN
        MGE+EE    +PKVI+FLSS+L+RV+ESNDK      ++ ++ + IS F+GL+RP+ISI NYLERIFKYANCSPSCF+VAYVYLDRF    PS PI+SFN
Subjt:  MGELEEIMVGIPKVISFLSSVLQRVSESNDKRRVRERERDEERKMISGFYGLSRPSISINNYLERIFKYANCSPSCFVVAYVYLDRFVHNHPSFPIDSFN

Query:  VHRLLITSVLLSAKFLDDL
        VHRLLITSV+++AKF+DD+
Subjt:  VHRLLITSVLLSAKFLDDL

XP_038900591.1 cyclin-U4-1-like [Benincasa hispida]3.5e-4279.83Show/hide
Query:  MGELEEIMVGIPKVISFLSSVLQRVSESNDKRRVRERERDEERKMISGFYGLSRPSISINNYLERIFKYANCSPSCFVVAYVYLDRFVHNHPSFPIDSFN
        M ELE  M GIPKVIS +SS+L+RVSESND++R R RE D + K++SGFYGLSRPSISI +YLERIFKYANCSPSCFVVAYVYL RF+HN PSF IDSFN
Subjt:  MGELEEIMVGIPKVISFLSSVLQRVSESNDKRRVRERERDEERKMISGFYGLSRPSISINNYLERIFKYANCSPSCFVVAYVYLDRFVHNHPSFPIDSFN

Query:  VHRLLITSVLLSAKFLDDL
        VHRLLITSVLLSAKFLDDL
Subjt:  VHRLLITSVLLSAKFLDDL

TrEMBL top hitse value%identityAlignment
A0A1S3BYF6 Cyclin5.2e-3673.55Show/hide
Query:  MGELEEIMVGIPKVISFLSSVLQRVSESNDKRRVRERERDEERKMISGFYGLSRPSISINNYLERIFKYANCSPSCFVVAYVYLDRFVHNH--PSFPIDS
        +GE EE MVGIPKVI++LSSVLQRVSESND+   R      +R   SGF G+SRPSISI +YLERIFKYANCSPSCFVVAYVYL RF+HNH   +F IDS
Subjt:  MGELEEIMVGIPKVISFLSSVLQRVSESNDKRRVRERERDEERKMISGFYGLSRPSISINNYLERIFKYANCSPSCFVVAYVYLDRFVHNH--PSFPIDS

Query:  FNVHRLLITSVLLSAKFLDDL
        FNVHRLLITSVL+SAKF DDL
Subjt:  FNVHRLLITSVLLSAKFLDDL

A0A2C9VSH5 Uncharacterized protein9.9e-3568.91Show/hide
Query:  MGELEEIMVGIPKVISFLSSVLQRVSESNDKRRVRERERDEERKMISGFYGLSRPSISINNYLERIFKYANCSPSCFVVAYVYLDRFVHNHPSFPIDSFN
        M +LE  +V +PK+I+FLSS+LQRV+ESND       +R      IS F+GL+RP+ISI +YLERIFKYANCSPSCFVVAYVYLDRF H  PSFPI+SFN
Subjt:  MGELEEIMVGIPKVISFLSSVLQRVSESNDKRRVRERERDEERKMISGFYGLSRPSISINNYLERIFKYANCSPSCFVVAYVYLDRFVHNHPSFPIDSFN

Query:  VHRLLITSVLLSAKFLDDL
        VHRLLITSVL+SAKFLDD+
Subjt:  VHRLLITSVLLSAKFLDDL

A0A5A7TTH4 Cyclin4.4e-3574.56Show/hide
Query:  MVGIPKVISFLSSVLQRVSESNDKRRVRERERDEERKMISGFYGLSRPSISINNYLERIFKYANCSPSCFVVAYVYLDRFVHNH--PSFPIDSFNVHRLL
        MVGIPKVI++LSSVLQRVSESND+   R      +R   SGF G+SRPSISI +YLERIFKYANCSPSCFVVAYVYL RF+HNH   +F IDSFNVHRLL
Subjt:  MVGIPKVISFLSSVLQRVSESNDKRRVRERERDEERKMISGFYGLSRPSISINNYLERIFKYANCSPSCFVVAYVYLDRFVHNH--PSFPIDSFNVHRLL

Query:  ITSVLLSAKFLDDL
        ITSVL+SAKF DDL
Subjt:  ITSVLLSAKFLDDL

A0A6J1CIA6 Cyclin7.6e-3568.91Show/hide
Query:  MGELEEIMVGIPKVISFLSSVLQRVSESNDKRRVRERERDEERKMISGFYGLSRPSISINNYLERIFKYANCSPSCFVVAYVYLDRFVHNHPSFPIDSFN
        M E  + +  IP+VI+FLSS+LQRVSESND           +   IS F+GL+RP+ISI++YL+RIFKYANCSPSCFVVAYVYLDRFV  HPS PIDSFN
Subjt:  MGELEEIMVGIPKVISFLSSVLQRVSESNDKRRVRERERDEERKMISGFYGLSRPSISINNYLERIFKYANCSPSCFVVAYVYLDRFVHNHPSFPIDSFN

Query:  VHRLLITSVLLSAKFLDDL
        VHRLLITSVL SAKFLDDL
Subjt:  VHRLLITSVLLSAKFLDDL

B9RA01 Cyclin1.3e-3466.39Show/hide
Query:  MGELEEIMVGIPKVISFLSSVLQRVSESNDKRRVRERERDEERKMISGFYGLSRPSISINNYLERIFKYANCSPSCFVVAYVYLDRFVHNHPSFPIDSFN
        M +LE  +V +PKV++FLSS+LQRV+ESND       +R      IS F+GL+RPSIS+ +YLERIFKYANCSPSCFV+AYVYLDRF    PSFPI+SFN
Subjt:  MGELEEIMVGIPKVISFLSSVLQRVSESNDKRRVRERERDEERKMISGFYGLSRPSISINNYLERIFKYANCSPSCFVVAYVYLDRFVHNHPSFPIDSFN

Query:  VHRLLITSVLLSAKFLDDL
        VHRLLITSVL+SAKF+DD+
Subjt:  VHRLLITSVLLSAKFLDDL

SwissProt top hitse value%identityAlignment
O80513 Cyclin-U4-17.3e-3566.67Show/hide
Query:  MGELEEIMVGIPKVISFLSSVLQRVSESND-KRRVRERERDEERKMISGFYGLSRPSISINNYLERIFKYANCSPSCFVVAYVYLDRFVHNHPSFPIDSF
        M ELE   V + K+I+FLSS+L+RV+ESND  RRV       + + +S F+GLSRP+I+I +YLERIFKYANCSPSCFVVAYVYLDRF H  PS PI+SF
Subjt:  MGELEEIMVGIPKVISFLSSVLQRVSESND-KRRVRERERDEERKMISGFYGLSRPSISINNYLERIFKYANCSPSCFVVAYVYLDRFVHNHPSFPIDSF

Query:  NVHRLLITSVLLSAKFLDDL
        NVHRLLITSV+++AKFLDDL
Subjt:  NVHRLLITSVLLSAKFLDDL

Q7XC35 Cyclin-P4-11.9e-3056.14Show/hide
Query:  EIMVGIPKVISFLSSVLQRVSESNDKRRVRERERDEERKMISGFYGLSRPSISINNYLERIFKYANCSPSCFVVAYVYLDRFVHNHPSFPIDSFNVHRLL
        E+   +P+V++ LSS+LQRV+E ND          EE   +S F GL++P+ISI  YLERIF++ANCSPSC+VVAY+YLDRF+   P+  +DSFNVHRLL
Subjt:  EIMVGIPKVISFLSSVLQRVSESNDKRRVRERERDEERKMISGFYGLSRPSISINNYLERIFKYANCSPSCFVVAYVYLDRFVHNHPSFPIDSFNVHRLL

Query:  ITSVLLSAKFLDDL
        ITSVL + KF+DD+
Subjt:  ITSVLLSAKFLDDL

Q9FKF6 Cyclin-U4-37.8e-2957.76Show/hide
Query:  LEEIMVGIPKVISFLSSVLQRVSESNDKRRVRERERDEERKMISGFYGLSRPSISINNYLERIFKYANCSPSCFVVAYVYLDRFVHNHPSFPIDSFNVHR
        L EIM   P V++ +S +LQRVSE+ND    +++         S F G+++PSISI +YLERIF+YANCS SC++VAY+YLDRFV   P  PI+SFNVHR
Subjt:  LEEIMVGIPKVISFLSSVLQRVSESNDKRRVRERERDEERKMISGFYGLSRPSISINNYLERIFKYANCSPSCFVVAYVYLDRFVHNHPSFPIDSFNVHR

Query:  LLITSVLLSAKFLDDL
        L+ITSVL+SAKF+DDL
Subjt:  LLITSVLLSAKFLDDL

Q9LJ45 Cyclin-U1-12.1e-2145.37Show/hide
Query:  PKVISFLSSVLQRVSESNDKRRVRERERDEERKMISGFYGLSRPSISINNYLERIFKYANCSPSCFVVAYVYLDRFVHNHPSFPIDSFNVHRLLITSVLL
        P+V++ +S V++++   N+      ++     K +  F+G+  PSISI  YLERI+KY  CSP+CFVV YVY+DR  H HP   + S NVHRLL+T V++
Subjt:  PKVISFLSSVLQRVSESNDKRRVRERERDEERKMISGFYGLSRPSISINNYLERIFKYANCSPSCFVVAYVYLDRFVHNHPSFPIDSFNVHRLLITSVLL

Query:  SAKFLDDL
        +AK LDD+
Subjt:  SAKFLDDL

Q9LY16 Cyclin-U4-21.2e-2960.36Show/hide
Query:  IPKVISFLSSVLQRVSESND--KRRVRERERDEERKMISGFYGLSRPSISINNYLERIFKYANCSPSCFVVAYVYLDRFVHNHPSFPIDSFNVHRLLITS
        +P VI+ +SS+LQRVSE+ND   R  RE +R      IS F  +++PSISI +Y+ERIFKYA+CS SC++VAY+YLDRF+   P  PIDS NVHRL+ITS
Subjt:  IPKVISFLSSVLQRVSESND--KRRVRERERDEERKMISGFYGLSRPSISINNYLERIFKYANCSPSCFVVAYVYLDRFVHNHPSFPIDSFNVHRLLITS

Query:  VLLSAKFLDDL
        VL+SAKF+DDL
Subjt:  VLLSAKFLDDL

Arabidopsis top hitse value%identityAlignment
AT2G44740.1 cyclin p4;15.2e-3666.67Show/hide
Query:  MGELEEIMVGIPKVISFLSSVLQRVSESND-KRRVRERERDEERKMISGFYGLSRPSISINNYLERIFKYANCSPSCFVVAYVYLDRFVHNHPSFPIDSF
        M ELE   V + K+I+FLSS+L+RV+ESND  RRV       + + +S F+GLSRP+I+I +YLERIFKYANCSPSCFVVAYVYLDRF H  PS PI+SF
Subjt:  MGELEEIMVGIPKVISFLSSVLQRVSESND-KRRVRERERDEERKMISGFYGLSRPSISINNYLERIFKYANCSPSCFVVAYVYLDRFVHNHPSFPIDSF

Query:  NVHRLLITSVLLSAKFLDDL
        NVHRLLITSV+++AKFLDDL
Subjt:  NVHRLLITSVLLSAKFLDDL

AT3G21870.1 cyclin p2;11.5e-2245.37Show/hide
Query:  PKVISFLSSVLQRVSESNDKRRVRERERDEERKMISGFYGLSRPSISINNYLERIFKYANCSPSCFVVAYVYLDRFVHNHPSFPIDSFNVHRLLITSVLL
        P+V++ +S V++++   N+      ++     K +  F+G+  PSISI  YLERI+KY  CSP+CFVV YVY+DR  H HP   + S NVHRLL+T V++
Subjt:  PKVISFLSSVLQRVSESNDKRRVRERERDEERKMISGFYGLSRPSISINNYLERIFKYANCSPSCFVVAYVYLDRFVHNHPSFPIDSFNVHRLLITSVLL

Query:  SAKFLDDL
        +AK LDD+
Subjt:  SAKFLDDL

AT3G63120.1 cyclin p1;18.3e-1845.79Show/hide
Query:  PKVISFLSSVLQRVSESNDKRRVRERERDEERKMISGFYGLSRPSISINNYLERIFKYANCSPSCFVVAYVYLDRFVHNHPSFPIDSFNVHRLLITSVLL
        P V+S LSS L+R    N   ++     D     ++ F G S P ISI +YL+RIFKY+ CSPSCFV+A++Y+D F+H   +  +   NVHRL+IT+V+L
Subjt:  PKVISFLSSVLQRVSESNDKRRVRERERDEERKMISGFYGLSRPSISINNYLERIFKYANCSPSCFVVAYVYLDRFVHNHPSFPIDSFNVHRLLITSVLL

Query:  SAKFLDD
        +AK  DD
Subjt:  SAKFLDD

AT5G07450.1 cyclin p4;38.5e-3160.36Show/hide
Query:  IPKVISFLSSVLQRVSESND--KRRVRERERDEERKMISGFYGLSRPSISINNYLERIFKYANCSPSCFVVAYVYLDRFVHNHPSFPIDSFNVHRLLITS
        +P VI+ +SS+LQRVSE+ND   R  RE +R      IS F  +++PSISI +Y+ERIFKYA+CS SC++VAY+YLDRF+   P  PIDS NVHRL+ITS
Subjt:  IPKVISFLSSVLQRVSESND--KRRVRERERDEERKMISGFYGLSRPSISINNYLERIFKYANCSPSCFVVAYVYLDRFVHNHPSFPIDSFNVHRLLITS

Query:  VLLSAKFLDDL
        VL+SAKF+DDL
Subjt:  VLLSAKFLDDL

AT5G61650.1 CYCLIN P4;25.5e-3057.76Show/hide
Query:  LEEIMVGIPKVISFLSSVLQRVSESNDKRRVRERERDEERKMISGFYGLSRPSISINNYLERIFKYANCSPSCFVVAYVYLDRFVHNHPSFPIDSFNVHR
        L EIM   P V++ +S +LQRVSE+ND    +++         S F G+++PSISI +YLERIF+YANCS SC++VAY+YLDRFV   P  PI+SFNVHR
Subjt:  LEEIMVGIPKVISFLSSVLQRVSESNDKRRVRERERDEERKMISGFYGLSRPSISINNYLERIFKYANCSPSCFVVAYVYLDRFVHNHPSFPIDSFNVHR

Query:  LLITSVLLSAKFLDDL
        L+ITSVL+SAKF+DDL
Subjt:  LLITSVLLSAKFLDDL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAGAATTAGAAGAAATAATGGTTGGGATTCCCAAAGTAATCAGTTTTCTGTCATCTGTTTTACAGAGAGTTTCAGAGTCAAATGACAAAAGGAGAGTAAGAGAAAG
AGAAAGAGATGAAGAGAGGAAAATGATTTCAGGGTTTTATGGGTTGTCAAGGCCAAGCATTTCCATTAATAACTACTTGGAGAGGATTTTTAAGTATGCAAATTGTAGCC
CAAGTTGCTTTGTTGTGGCTTATGTTTATCTTGATCGCTTTGTTCACAATCATCCTTCTTTTCCCATTGATTCTTTCAATGTTCATAGACTTCTCATTACAAGTGTTCTT
CTCTCTGCCAAGTTCTTGGATGACTTGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGGAGAATTAGAAGAAATAATGGTTGGGATTCCCAAAGTAATCAGTTTTCTGTCATCTGTTTTACAGAGAGTTTCAGAGTCAAATGACAAAAGGAGAGTAAGAGAAAG
AGAAAGAGATGAAGAGAGGAAAATGATTTCAGGGTTTTATGGGTTGTCAAGGCCAAGCATTTCCATTAATAACTACTTGGAGAGGATTTTTAAGTATGCAAATTGTAGCC
CAAGTTGCTTTGTTGTGGCTTATGTTTATCTTGATCGCTTTGTTCACAATCATCCTTCTTTTCCCATTGATTCTTTCAATGTTCATAGACTTCTCATTACAAGTGTTCTT
CTCTCTGCCAAGTTCTTGGATGACTTGTAA
Protein sequenceShow/hide protein sequence
MGELEEIMVGIPKVISFLSSVLQRVSESNDKRRVRERERDEERKMISGFYGLSRPSISINNYLERIFKYANCSPSCFVVAYVYLDRFVHNHPSFPIDSFNVHRLLITSVL
LSAKFLDDL