; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

HG10001887 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10001887
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Descriptionglycine-rich cell wall structural protein 2
Genome locationChr11:1400136..1400618
RNA-Seq ExpressionHG10001887
SyntenyHG10001887
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004146895.1 glycine-rich cell wall structural protein 2 [Cucumis sativus]5.9e-6185.54Show/hide
Query:  MKKPSTFHLSSLFFLLFVTTASSTVSGGATARKLLNFPDMSWGSPNGGG----GSPTGNYGSAHGPNWDYNWGWGSSPGSGWGYGSGSGRSPTGFGKGYG
        MK+PS FHLSSLFFLLFV T+SSTVS GAT RKLLNFPDMSWGSP+GGG    G+PTG YGS HGPNWDYNWGWGSSPGSGWG+GSGSGRSPTGFGKGYG
Subjt:  MKKPSTFHLSSLFFLLFVTTASSTVSGGATARKLLNFPDMSWGSPNGGG----GSPTGNYGSAHGPNWDYNWGWGSSPGSGWGYGSGSGRSPTGFGKGYG

Query:  YGFGSGSGSGSGYGYGSGSGGARGGGYGSGSGYGNSSGG--GGGYDDPSGDEYRSATTTREKNRQG
        YGFGSGSGSGSGYGYGSGSGGA GGGYGSGSGYGNS GG  GGGY  PSGDEYRS  TTR+KNRQG
Subjt:  YGFGSGSGSGSGYGYGSGSGGARGGGYGSGSGYGNSSGG--GGGYDDPSGDEYRSATTTREKNRQG

XP_016901488.1 PREDICTED: glycine-rich cell wall structural protein 2 [Cucumis melo]5.3e-6286.67Show/hide
Query:  MKKPSTFHLSSLFFLLFVTTASSTVSGGATARKLLNFPDMSWGSPNGGG---GSPTGNYGSAHGPNWDYNWGWGSSPGSGWGYGSGSGRSPTGFGKGYGY
        MK+PS FHLSSLFFLLFV T+SSTVSG AT RKLLNFPDMSWGSPNGGG   G+PTG YGS H PNWDYNWGWGSSPGSGWG+GSGSGRSPTGFGKGYGY
Subjt:  MKKPSTFHLSSLFFLLFVTTASSTVSGGATARKLLNFPDMSWGSPNGGG---GSPTGNYGSAHGPNWDYNWGWGSSPGSGWGYGSGSGRSPTGFGKGYGY

Query:  GFGSGSGSGSGYGYGSGSGGARGGGYGSGSGYGNS--SGGGGGYDDPSGDEYRSATTTREKNRQG
        GFGSGSGSGSGYGYGSGSGGA GGGYGSGSGYGNS   GGGGGY  PSGDEYRS TTTR+KNRQG
Subjt:  GFGSGSGSGSGYGYGSGSGGARGGGYGSGSGYGNS--SGGGGGYDDPSGDEYRSATTTREKNRQG

XP_022922583.1 glycine-rich cell wall structural protein 2-like [Cucurbita moschata]7.9e-5075.88Show/hide
Query:  MKKPSTFHLSSLFFLLFVTTASSTVSGGATARKLLNFPDMSWGSPNGGGGSPTGNYGSAHGPNWDYNWGWGSSPGSGWGYGSGSGRSPTGFGKGYGYGFG
        MKKPS FHLS LFFLLF  TASS V G    RKLLN PDM WGSPN GGG+PTG YGSAHGPNWDYNWGWGSSPGSGWGYGSGSGRSPTGFGKGYGYGFG
Subjt:  MKKPSTFHLSSLFFLLFVTTASSTVSGGATARKLLNFPDMSWGSPNGGGGSPTGNYGSAHGPNWDYNWGWGSSPGSGWGYGSGSGRSPTGFGKGYGYGFG

Query:  SGSGSGSGYGYGSGSGGARGGGYGSGSGYGNSS--------GG--GGGYDDPSGDEYRSATTTREKNRQG
        SGSGSGSGYGYGSG GGA GGGYGSGSGYGNS         GG  GGGY + SG EY  +  T++K+R G
Subjt:  SGSGSGSGYGYGSGSGGARGGGYGSGSGYGNSS--------GG--GGGYDDPSGDEYRSATTTREKNRQG

XP_023553046.1 keratin-associated protein 21-1-like [Cucurbita pepo subsp. pepo]6.1e-5075.88Show/hide
Query:  MKKPSTFHLSSLFFLLFVTTASSTVSGGATARKLLNFPDMSWGSPNGGGGSPTGNYGSAHGPNWDYNWGWGSSPGSGWGYGSGSGRSPTGFGKGYGYGFG
        MKKPS FHLS LFFLLF  TASS V G    RKLLN PDM WGSPN GGG+PTG YGSAHGPNWDYNWGWGSSPGSGWGYGSGSGRSPTGFGKGYGYGFG
Subjt:  MKKPSTFHLSSLFFLLFVTTASSTVSGGATARKLLNFPDMSWGSPNGGGGSPTGNYGSAHGPNWDYNWGWGSSPGSGWGYGSGSGRSPTGFGKGYGYGFG

Query:  SGSGSGSGYGYGSGSGGARGGGYGSGSGYGNSS-----GG-----GGGYDDPSGDEYRSATTTREKNRQG
        SGSGSGSGYGYGSG GGA GGGYGSGSGYGNS+     GG     GGGY + SG EY  +  T++K+R G
Subjt:  SGSGSGSGYGYGSGSGGARGGGYGSGSGYGNSS-----GG-----GGGYDDPSGDEYRSATTTREKNRQG

XP_038899364.1 glycine-rich cell wall structural protein 2-like [Benincasa hispida]7.2e-5985.89Show/hide
Query:  MKKPSTFHLSSLFFLLFVTTA-SSTVSGGATARKLLNFPDMSWGSPN--GGGGSPTGNYGSAHGPNWDYNWGWGSSPGSGWGYGSGSGRSPTGFGKGYGY
        MKKPSTFHL SLFFLLFV TA SSTVSG ATARKLLNFPDMSWGSPN  GGGG+PTG YGSAHGPNWDYNWGWGSSPGSGWGYGSGSGRSPTGFGKGYGY
Subjt:  MKKPSTFHLSSLFFLLFVTTA-SSTVSGGATARKLLNFPDMSWGSPN--GGGGSPTGNYGSAHGPNWDYNWGWGSSPGSGWGYGSGSGRSPTGFGKGYGY

Query:  GFGSGSGSGSGYGYGSGSGGARGGGYGSGSGYGNS--SGGGGGYDDPSGDEYRSATTTREKNR
        G+G GSGSGSG+GYGSGSGGA GGGYGSGSGYGNS  +G GGGY  P+G+EYRS TTT++KNR
Subjt:  GFGSGSGSGSGYGYGSGSGGARGGGYGSGSGYGNS--SGGGGGYDDPSGDEYRSATTTREKNR

TrEMBL top hitse value%identityAlignment
A0A0A0KXP2 Uncharacterized protein2.8e-6185.54Show/hide
Query:  MKKPSTFHLSSLFFLLFVTTASSTVSGGATARKLLNFPDMSWGSPNGGG----GSPTGNYGSAHGPNWDYNWGWGSSPGSGWGYGSGSGRSPTGFGKGYG
        MK+PS FHLSSLFFLLFV T+SSTVS GAT RKLLNFPDMSWGSP+GGG    G+PTG YGS HGPNWDYNWGWGSSPGSGWG+GSGSGRSPTGFGKGYG
Subjt:  MKKPSTFHLSSLFFLLFVTTASSTVSGGATARKLLNFPDMSWGSPNGGG----GSPTGNYGSAHGPNWDYNWGWGSSPGSGWGYGSGSGRSPTGFGKGYG

Query:  YGFGSGSGSGSGYGYGSGSGGARGGGYGSGSGYGNSSGG--GGGYDDPSGDEYRSATTTREKNRQG
        YGFGSGSGSGSGYGYGSGSGGA GGGYGSGSGYGNS GG  GGGY  PSGDEYRS  TTR+KNRQG
Subjt:  YGFGSGSGSGSGYGYGSGSGGARGGGYGSGSGYGNSSGG--GGGYDDPSGDEYRSATTTREKNRQG

A0A1S4DZT0 glycine-rich cell wall structural protein 22.6e-6286.67Show/hide
Query:  MKKPSTFHLSSLFFLLFVTTASSTVSGGATARKLLNFPDMSWGSPNGGG---GSPTGNYGSAHGPNWDYNWGWGSSPGSGWGYGSGSGRSPTGFGKGYGY
        MK+PS FHLSSLFFLLFV T+SSTVSG AT RKLLNFPDMSWGSPNGGG   G+PTG YGS H PNWDYNWGWGSSPGSGWG+GSGSGRSPTGFGKGYGY
Subjt:  MKKPSTFHLSSLFFLLFVTTASSTVSGGATARKLLNFPDMSWGSPNGGG---GSPTGNYGSAHGPNWDYNWGWGSSPGSGWGYGSGSGRSPTGFGKGYGY

Query:  GFGSGSGSGSGYGYGSGSGGARGGGYGSGSGYGNS--SGGGGGYDDPSGDEYRSATTTREKNRQG
        GFGSGSGSGSGYGYGSGSGGA GGGYGSGSGYGNS   GGGGGY  PSGDEYRS TTTR+KNRQG
Subjt:  GFGSGSGSGSGYGYGSGSGGARGGGYGSGSGYGNS--SGGGGGYDDPSGDEYRSATTTREKNRQG

A0A5A7TRC6 Glycine-rich cell wall structural protein 22.6e-6286.67Show/hide
Query:  MKKPSTFHLSSLFFLLFVTTASSTVSGGATARKLLNFPDMSWGSPNGGG---GSPTGNYGSAHGPNWDYNWGWGSSPGSGWGYGSGSGRSPTGFGKGYGY
        MK+PS FHLSSLFFLLFV T+SSTVSG AT RKLLNFPDMSWGSPNGGG   G+PTG YGS H PNWDYNWGWGSSPGSGWG+GSGSGRSPTGFGKGYGY
Subjt:  MKKPSTFHLSSLFFLLFVTTASSTVSGGATARKLLNFPDMSWGSPNGGG---GSPTGNYGSAHGPNWDYNWGWGSSPGSGWGYGSGSGRSPTGFGKGYGY

Query:  GFGSGSGSGSGYGYGSGSGGARGGGYGSGSGYGNS--SGGGGGYDDPSGDEYRSATTTREKNRQG
        GFGSGSGSGSGYGYGSGSGGA GGGYGSGSGYGNS   GGGGGY  PSGDEYRS TTTR+KNRQG
Subjt:  GFGSGSGSGSGYGYGSGSGGARGGGYGSGSGYGNS--SGGGGGYDDPSGDEYRSATTTREKNRQG

A0A6J1E737 glycine-rich cell wall structural protein 2-like3.8e-5075.88Show/hide
Query:  MKKPSTFHLSSLFFLLFVTTASSTVSGGATARKLLNFPDMSWGSPNGGGGSPTGNYGSAHGPNWDYNWGWGSSPGSGWGYGSGSGRSPTGFGKGYGYGFG
        MKKPS FHLS LFFLLF  TASS V G    RKLLN PDM WGSPN GGG+PTG YGSAHGPNWDYNWGWGSSPGSGWGYGSGSGRSPTGFGKGYGYGFG
Subjt:  MKKPSTFHLSSLFFLLFVTTASSTVSGGATARKLLNFPDMSWGSPNGGGGSPTGNYGSAHGPNWDYNWGWGSSPGSGWGYGSGSGRSPTGFGKGYGYGFG

Query:  SGSGSGSGYGYGSGSGGARGGGYGSGSGYGNSS--------GG--GGGYDDPSGDEYRSATTTREKNRQG
        SGSGSGSGYGYGSG GGA GGGYGSGSGYGNS         GG  GGGY + SG EY  +  T++K+R G
Subjt:  SGSGSGSGYGYGSGSGGARGGGYGSGSGYGNSS--------GG--GGGYDDPSGDEYRSATTTREKNRQG

A0A6J1J236 glycine-rich cell wall structural protein 2-like9.5e-4974.71Show/hide
Query:  MKKPSTFHLSSLFFLLFVTTASSTVSGGATARKLLNFPDMSWGSPNGGGGSPTGNYGSAHGPNWDYNWGWGSSPGSGWGYGSGSGRSPTGFGKGYGYGFG
        MKKPS FHLS LFFLLF  T SS V G    RKLLN PDM WGSPN GGG+PTG YGSAHGPNWDYNWGWGSSPGSGWGYGSGSGRS TGFGKGYGYGFG
Subjt:  MKKPSTFHLSSLFFLLFVTTASSTVSGGATARKLLNFPDMSWGSPNGGGGSPTGNYGSAHGPNWDYNWGWGSSPGSGWGYGSGSGRSPTGFGKGYGYGFG

Query:  SGSGSGSGYGYGSGSGGARGGGYGSGSGYGNSS--------GG--GGGYDDPSGDEYRSATTTREKNRQG
        SGSGSGSGYGYGSG GGA GGGYGSGSGYGNS         GG  GGGY + SG EY  +  T++K+R G
Subjt:  SGSGSGSGYGYGSGSGGARGGGYGSGSGYGNSS--------GG--GGGYDDPSGDEYRSATTTREKNRQG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G61660.1 glycine-rich protein1.5e-2577.53Show/hide
Query:  GSPTGNYGSAHGPNWDYNWGWGSSPGSGWGYGSGSGRSPTGFGKGYGYGFGSGSGSGSGYGYGSGSGGARGGGYGSGSGYGNSSGGGGG
        G+  G  GS  GPNW+YNWGWGS+PGSGWGYG+GSGRSPTG+G+G GYG+GSGSGSG+GYGYGSG GGARGGGYG GSG G S GGGGG
Subjt:  GSPTGNYGSAHGPNWDYNWGWGSSPGSGWGYGSGSGRSPTGFGKGYGYGFGSGSGSGSGYGYGSGSGGARGGGYGSGSGYGNSSGGGGG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAAAAACCATCTACATTTCATCTCTCATCTCTCTTCTTTCTCCTCTTTGTCACCACAGCTTCCTCCACCGTCAGCGGCGGCGCTACTGCCCGGAAACTGCTCAACTT
TCCTGACATGTCTTGGGGATCACCCAATGGAGGAGGTGGGAGCCCCACTGGGAACTATGGCTCTGCCCATGGTCCTAATTGGGACTACAATTGGGGTTGGGGTTCGAGCC
CGGGTAGCGGTTGGGGTTACGGTTCCGGTTCCGGCCGCTCCCCAACCGGATTCGGAAAAGGTTATGGATATGGATTTGGATCTGGATCAGGGTCCGGGTCTGGATATGGG
TATGGAAGTGGGAGTGGTGGTGCTCGTGGTGGTGGATATGGGTCCGGAAGTGGCTACGGTAATTCTAGCGGTGGCGGTGGTGGATACGACGATCCGAGTGGCGATGAGTA
TCGATCGGCAACCACTACAAGGGAGAAAAATAGGCAAGGGTAG
mRNA sequenceShow/hide mRNA sequence
ATGAAAAAACCATCTACATTTCATCTCTCATCTCTCTTCTTTCTCCTCTTTGTCACCACAGCTTCCTCCACCGTCAGCGGCGGCGCTACTGCCCGGAAACTGCTCAACTT
TCCTGACATGTCTTGGGGATCACCCAATGGAGGAGGTGGGAGCCCCACTGGGAACTATGGCTCTGCCCATGGTCCTAATTGGGACTACAATTGGGGTTGGGGTTCGAGCC
CGGGTAGCGGTTGGGGTTACGGTTCCGGTTCCGGCCGCTCCCCAACCGGATTCGGAAAAGGTTATGGATATGGATTTGGATCTGGATCAGGGTCCGGGTCTGGATATGGG
TATGGAAGTGGGAGTGGTGGTGCTCGTGGTGGTGGATATGGGTCCGGAAGTGGCTACGGTAATTCTAGCGGTGGCGGTGGTGGATACGACGATCCGAGTGGCGATGAGTA
TCGATCGGCAACCACTACAAGGGAGAAAAATAGGCAAGGGTAG
Protein sequenceShow/hide protein sequence
MKKPSTFHLSSLFFLLFVTTASSTVSGGATARKLLNFPDMSWGSPNGGGGSPTGNYGSAHGPNWDYNWGWGSSPGSGWGYGSGSGRSPTGFGKGYGYGFGSGSGSGSGYG
YGSGSGGARGGGYGSGSGYGNSSGGGGGYDDPSGDEYRSATTTREKNRQG