; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

HG10001901 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10001901
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionGrowth-regulating factor
Genome locationChr11:1514388..1514660
RNA-Seq ExpressionHG10001901
SyntenyHG10001901
Gene Ontology termsGO:0006351 - transcription, DNA-templated (biological process)
GO:0032502 - developmental process (biological process)
GO:0005634 - nucleus (cellular component)
InterPro domainsIPR014977 - WRC domain
IPR031137 - Growth-regulating factor


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0060969.1 growth-regulating factor 6-like [Cucumis melo var. makuwa]5.3e-1954.37Show/hide
Query:  EEMRCSRDAVVDQKYCERHMNRGRH-----------------------------QLLQLLRHTATVLCNSGPNSLSFANQHFKNLHRIGSHPPPSAAAAQ
        ++ RCSRDAV DQKYCERHMNRGRH                             +L+     TA V CN  PNSLSFANQHFKNLH  GSHPPPS+AAAQ
Subjt:  EEMRCSRDAVVDQKYCERHMNRGRH-----------------------------QLLQLLRHTATVLCNSGPNSLSFANQHFKNLHRIGSHPPPSAAAAQ

Query:  INR
        INR
Subjt:  INR

XP_004143032.1 growth-regulating factor 1 isoform X1 [Cucumis sativus]5.3e-1954.37Show/hide
Query:  EEMRCSRDAVVDQKYCERHMNRGRH-----------------------------QLLQLLRHTATVLCNSGPNSLSFANQHFKNLHRIGSHPPPSAAAAQ
        ++ RCSRDAV DQKYCERHMNRGRH                             +L+     TA V CN  PNSLSFANQHFKNL R GSHPPPS+AAAQ
Subjt:  EEMRCSRDAVVDQKYCERHMNRGRH-----------------------------QLLQLLRHTATVLCNSGPNSLSFANQHFKNLHRIGSHPPPSAAAAQ

Query:  INR
        INR
Subjt:  INR

XP_008444523.1 PREDICTED: growth-regulating factor 6-like [Cucumis melo]6.3e-2055.34Show/hide
Query:  EEMRCSRDAVVDQKYCERHMNRGRH-----------------------------QLLQLLRHTATVLCNSGPNSLSFANQHFKNLHRIGSHPPPSAAAAQ
        ++ RCSRDAV DQKYCERHMNRGRH                             +L+     TA V CN  PNSLSFANQHFKNLHR GSHPPPS+AAAQ
Subjt:  EEMRCSRDAVVDQKYCERHMNRGRH-----------------------------QLLQLLRHTATVLCNSGPNSLSFANQHFKNLHRIGSHPPPSAAAAQ

Query:  INR
        INR
Subjt:  INR

XP_011649553.1 growth-regulating factor 1 isoform X2 [Cucumis sativus]5.3e-1954.37Show/hide
Query:  EEMRCSRDAVVDQKYCERHMNRGRH-----------------------------QLLQLLRHTATVLCNSGPNSLSFANQHFKNLHRIGSHPPPSAAAAQ
        ++ RCSRDAV DQKYCERHMNRGRH                             +L+     TA V CN  PNSLSFANQHFKNL R GSHPPPS+AAAQ
Subjt:  EEMRCSRDAVVDQKYCERHMNRGRH-----------------------------QLLQLLRHTATVLCNSGPNSLSFANQHFKNLHRIGSHPPPSAAAAQ

Query:  INR
        INR
Subjt:  INR

XP_038886692.1 growth-regulating factor 6-like isoform X2 [Benincasa hispida]2.0e-1855.34Show/hide
Query:  EEMRCSRDAVVDQKYCERHMNRGRH-----------------------------QLLQLLRHTATVLCNSGPNSLSFANQHFKNLHRIGSHPPPSAAAAQ
        ++ RCSRDAV DQKYCERHMNRGRH                             +L+     TA V CNS PNSLSF NQHFKNLHR GSHPPPS AAAQ
Subjt:  EEMRCSRDAVVDQKYCERHMNRGRH-----------------------------QLLQLLRHTATVLCNSGPNSLSFANQHFKNLHRIGSHPPPSAAAAQ

Query:  INR
        INR
Subjt:  INR

TrEMBL top hitse value%identityAlignment
A0A0A0LR18 Growth-regulating factor2.6e-1954.37Show/hide
Query:  EEMRCSRDAVVDQKYCERHMNRGRH-----------------------------QLLQLLRHTATVLCNSGPNSLSFANQHFKNLHRIGSHPPPSAAAAQ
        ++ RCSRDAV DQKYCERHMNRGRH                             +L+     TA V CN  PNSLSFANQHFKNL R GSHPPPS+AAAQ
Subjt:  EEMRCSRDAVVDQKYCERHMNRGRH-----------------------------QLLQLLRHTATVLCNSGPNSLSFANQHFKNLHRIGSHPPPSAAAAQ

Query:  INR
        INR
Subjt:  INR

A0A1S3BBC2 Growth-regulating factor3.0e-2055.34Show/hide
Query:  EEMRCSRDAVVDQKYCERHMNRGRH-----------------------------QLLQLLRHTATVLCNSGPNSLSFANQHFKNLHRIGSHPPPSAAAAQ
        ++ RCSRDAV DQKYCERHMNRGRH                             +L+     TA V CN  PNSLSFANQHFKNLHR GSHPPPS+AAAQ
Subjt:  EEMRCSRDAVVDQKYCERHMNRGRH-----------------------------QLLQLLRHTATVLCNSGPNSLSFANQHFKNLHRIGSHPPPSAAAAQ

Query:  INR
        INR
Subjt:  INR

A0A5A7V5I0 Growth-regulating factor2.6e-1954.37Show/hide
Query:  EEMRCSRDAVVDQKYCERHMNRGRH-----------------------------QLLQLLRHTATVLCNSGPNSLSFANQHFKNLHRIGSHPPPSAAAAQ
        ++ RCSRDAV DQKYCERHMNRGRH                             +L+     TA V CN  PNSLSFANQHFKNLH  GSHPPPS+AAAQ
Subjt:  EEMRCSRDAVVDQKYCERHMNRGRH-----------------------------QLLQLLRHTATVLCNSGPNSLSFANQHFKNLHRIGSHPPPSAAAAQ

Query:  INR
        INR
Subjt:  INR

A0A6J1BQK3 Growth-regulating factor2.3e-1250.5Show/hide
Query:  EEMRCSRDAVVDQKYCERHMNRGRHQLLQLLR-------------HTAT------------VLCNSGPNSLSFANQHFKNLHR--IGSHPPPSAAAAQIN
        ++ RCSRDAV DQKYCERHMNRGRH+  + +               TAT            V  N   NSLSF NQ+FKNLHR   GS P PSAA AQIN
Subjt:  EEMRCSRDAVVDQKYCERHMNRGRHQLLQLLR-------------HTAT------------VLCNSGPNSLSFANQHFKNLHR--IGSHPPPSAAAAQIN

Query:  R
        R
Subjt:  R

A0A6J1K8C6 Growth-regulating factor4.7e-1344.66Show/hide
Query:  EEMRCSRDAVVDQKYCERHMNRGRH-----------------------------QLLQLLRHTATVLCNSGPNSLSFANQHFKNLHRIGSHPPPSAAAAQ
        ++ RCSRDAV DQKYCERHMNRGRH                             +L+      A V  N+  N+LSFA+QHFKN+    SHPPPS+  AQ
Subjt:  EEMRCSRDAVVDQKYCERHMNRGRH-----------------------------QLLQLLRHTATVLCNSGPNSLSFANQHFKNLHRIGSHPPPSAAAAQ

Query:  INR
        INR
Subjt:  INR

SwissProt top hitse value%identityAlignment
O81001 Growth-regulating factor 12.7e-0576.92Show/hide
Query:  EEMRCSRDAVVDQKYCERHMNRGRHQ
        ++ RCSRDAV DQKYCERH+NRGRH+
Subjt:  EEMRCSRDAVVDQKYCERHMNRGRHQ

Q6AWY1 Growth-regulating factor 82.0e-0534.12Show/hide
Query:  EEMRCSRDAVVDQKYCERHMNRGRHQLLQLLRHTATVLCNSGPNSLSFANQHFKNLHRIGSHPPPSAAAAQIN-----RQNHSFL
        ++ RCSRDAV DQKYCERH+NRGRH+  + +      L  + P+++  A    +  H +        +AA ++     + N  FL
Subjt:  EEMRCSRDAVVDQKYCERHMNRGRHQLLQLLRHTATVLCNSGPNSLSFANQHFKNLHRIGSHPPPSAAAAQIN-----RQNHSFL

Q6AWY2 Growth-regulating factor 75.4e-0680.77Show/hide
Query:  EEMRCSRDAVVDQKYCERHMNRGRHQ
        ++ RCSRDAVVDQKYCERH+NRGRH+
Subjt:  EEMRCSRDAVVDQKYCERHMNRGRHQ

Q6AWY3 Growth-regulating factor 65.4e-0636.84Show/hide
Query:  EEMRCSRDAVVDQKYCERHMNRGRHQLLQLLRHTATVLCNSGPNSLSFANQHFKNLHRIGSHPPPSAAAAQINRQN
        ++ RCSRDAV DQKYCERHMNRGRH+  + +         + P +++ A           +H   + A   IN Q+
Subjt:  EEMRCSRDAVVDQKYCERHMNRGRHQLLQLLRHTATVLCNSGPNSLSFANQHFKNLHRIGSHPPPSAAAAQINRQN

Q8L8A8 Growth-regulating factor 22.0e-0540.79Show/hide
Query:  EEMRCSRDAVVDQKYCERHMNRGRHQLLQLLRHTATVLCNSGPNSLSFANQHFKNLHRIGSHPPPSAAAAQINRQN
        ++ RCSRDAV DQKYCERH+NRGRH      R    V   SG N  + A        +  + P     A   NR N
Subjt:  EEMRCSRDAVVDQKYCERHMNRGRHQLLQLLRHTATVLCNSGPNSLSFANQHFKNLHRIGSHPPPSAAAAQINRQN

Arabidopsis top hitse value%identityAlignment
AT2G22840.1 growth-regulating factor 11.9e-0676.92Show/hide
Query:  EEMRCSRDAVVDQKYCERHMNRGRHQ
        ++ RCSRDAV DQKYCERH+NRGRH+
Subjt:  EEMRCSRDAVVDQKYCERHMNRGRHQ

AT3G13960.1 growth-regulating factor 52.1e-0542.31Show/hide
Query:  EEMRCSRDAVVDQKYCERHMNRGRHQLLQLLRHTATVLCNSGPNSLSFANQH
        ++ RCSR+A  D KYCE+HM+RGR++  + L    T        SLSF N +
Subjt:  EEMRCSRDAVVDQKYCERHMNRGRHQLLQLLRHTATVLCNSGPNSLSFANQH

AT4G37740.1 growth-regulating factor 21.4e-0640.79Show/hide
Query:  EEMRCSRDAVVDQKYCERHMNRGRHQLLQLLRHTATVLCNSGPNSLSFANQHFKNLHRIGSHPPPSAAAAQINRQN
        ++ RCSRDAV DQKYCERH+NRGRH      R    V   SG N  + A        +  + P     A   NR N
Subjt:  EEMRCSRDAVVDQKYCERHMNRGRHQLLQLLRHTATVLCNSGPNSLSFANQHFKNLHRIGSHPPPSAAAAQINRQN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATGATTGGACTGGGACTCAACCGACAGGAAGAAATGCGGTGCTCAAGAGACGCAGTTGTCGATCAGAAATACTGTGAACGACATATGAACAGAGGCCGCCATCAGCT
TCTTCAGCTTCTACGCCATACGGCGACAGTGCTCTGCAACAGCGGCCCCAACAGCCTCTCCTTTGCTAACCAACACTTCAAGAATCTCCACCGCATCGGATCTCATCCGC
CTCCCTCCGCCGCCGCCGCTCAAATTAACAGGCAAAACCATTCTTTTTTATAA
mRNA sequenceShow/hide mRNA sequence
ATGATGATTGGACTGGGACTCAACCGACAGGAAGAAATGCGGTGCTCAAGAGACGCAGTTGTCGATCAGAAATACTGTGAACGACATATGAACAGAGGCCGCCATCAGCT
TCTTCAGCTTCTACGCCATACGGCGACAGTGCTCTGCAACAGCGGCCCCAACAGCCTCTCCTTTGCTAACCAACACTTCAAGAATCTCCACCGCATCGGATCTCATCCGC
CTCCCTCCGCCGCCGCCGCTCAAATTAACAGGCAAAACCATTCTTTTTTATAA
Protein sequenceShow/hide protein sequence
MMIGLGLNRQEEMRCSRDAVVDQKYCERHMNRGRHQLLQLLRHTATVLCNSGPNSLSFANQHFKNLHRIGSHPPPSAAAAQINRQNHSFL