; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

HG10001937 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10001937
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionAgamous-like mads-box protein
Genome locationChr11:1899231..1901194
RNA-Seq ExpressionHG10001937
SyntenyHG10001937
Gene Ontology termsGO:0045944 - positive regulation of transcription by RNA polymerase II (biological process)
GO:0005634 - nucleus (cellular component)
GO:0000977 - RNA polymerase II regulatory region sequence-specific DNA binding (molecular function)
GO:0003700 - DNA-binding transcription factor activity (molecular function)
GO:0046983 - protein dimerization activity (molecular function)
InterPro domainsIPR002100 - Transcription factor, MADS-box
IPR033896 - MADS MEF2-like
IPR036879 - Transcription factor, MADS-box superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ERM94241.1 hypothetical protein AMTR_s00010p00214260 [Amborella trichopoda]1.8e-3584.78Show/hide
Query:  MGRVKLQIKRIENTTNRQVTFSKRRNGLIKKAYELSVLCDIDIALIMFSPSGRLSQFSGRRRIEDVLARYINLPDHDRGGPSIQNRFFSTTA
        MGRVKLQIK+IEN+TNRQVTFSKRRNGLIKKAYELS+LCDIDIALIMFSPSGRLSQFSG++RIEDVLARY+NLPDHDRGGP +QN+ +   A
Subjt:  MGRVKLQIKRIENTTNRQVTFSKRRNGLIKKAYELSVLCDIDIALIMFSPSGRLSQFSGRRRIEDVLARYINLPDHDRGGPSIQNRFFSTTA

XP_008442144.1 PREDICTED: agamous-like MADS-box protein AGL66 [Cucumis melo]1.4e-3565.69Show/hide
Query:  MGRVKLQIKRIENTTNRQVTFSKRRNGLIKKAYELSVLCDIDIALIMFSPSGRLSQFSGRRRIEDVLARYINLPDHDRGGPSIQNRFF-----------S
        MGRVKLQIKRIENTTNRQVTFSKRRNGLIKKAYELS+LCDIDIALIMFSPSGRLSQFSGRRRIEDVLARYINLPDHDRG   +QN+ F           +
Subjt:  MGRVKLQIKRIENTTNRQVTFSKRRNGLIKKAYELSVLCDIDIALIMFSPSGRLSQFSGRRRIEDVLARYINLPDHDRGGPSIQNRFF-----------S

Query:  TTAECCGDGLIDHGGEEEEASINSTSNNEIQIAESNL
          A+   +    +   EE      T  +E+Q+AE  L
Subjt:  TTAECCGDGLIDHGGEEEEASINSTSNNEIQIAESNL

XP_011654394.1 agamous-like MADS-box protein AGL66 [Cucumis sativus]2.4e-3565.69Show/hide
Query:  MGRVKLQIKRIENTTNRQVTFSKRRNGLIKKAYELSVLCDIDIALIMFSPSGRLSQFSGRRRIEDVLARYINLPDHDRGGPSIQNRFF-----------S
        MGRVKLQIKRIENTTNRQVTFSKRRNGLIKKAYELS+LCDIDIALIMFSPSGRLSQFSGRRRIEDVLARYINLPDHDRG   +QN+ F           +
Subjt:  MGRVKLQIKRIENTTNRQVTFSKRRNGLIKKAYELSVLCDIDIALIMFSPSGRLSQFSGRRRIEDVLARYINLPDHDRGGPSIQNRFF-----------S

Query:  TTAECCGDGLIDHGGEEEEASINSTSNNEIQIAESNL
          A+   +    +   EE      T  +E+Q+AE  L
Subjt:  TTAECCGDGLIDHGGEEEEASINSTSNNEIQIAESNL

XP_023911967.1 agamous-like MADS-box protein AGL104 [Quercus suber]3.1e-3589.77Show/hide
Query:  MGRVKLQIKRIENTTNRQVTFSKRRNGLIKKAYELSVLCDIDIALIMFSPSGRLSQFSGRRRIEDVLARYINLPDHDRGGPSIQNRFF
        MGRVKLQIKRIEN TNRQVTFSKRRNGLIKKAYELS+LCDIDIALIMFSPSGRL+ FSG+RRIEDVLARYINLPDHDRGG ++QNR F
Subjt:  MGRVKLQIKRIENTTNRQVTFSKRRNGLIKKAYELSVLCDIDIALIMFSPSGRLSQFSGRRRIEDVLARYINLPDHDRGGPSIQNRFF

XP_038883364.1 agamous-like MADS-box protein AGL104 [Benincasa hispida]6.9e-3573.33Show/hide
Query:  MGRVKLQIKRIENTTNRQVTFSKRRNGLIKKAYELSVLCDIDIALIMFSPSGRLSQFSGRRRIEDVLARYINLPDHDRGGPSIQNRFFSTTAECCGDGLI
        MGRVKLQIKRIENTTNRQVTFSKRRNGLIKKAYELSVLCDIDIALIMFSPSGRLSQFSGRRRIEDVLARYINLPDHDRG   + N+ F         G +
Subjt:  MGRVKLQIKRIENTTNRQVTFSKRRNGLIKKAYELSVLCDIDIALIMFSPSGRLSQFSGRRRIEDVLARYINLPDHDRGGPSIQNRFFSTTAECCGDGLI

Query:  DHGGEEEEAS---INSTSNN
        ++   E E +   +N TS+N
Subjt:  DHGGEEEEAS---INSTSNN

TrEMBL top hitse value%identityAlignment
A0A1S3B5T1 agamous-like MADS-box protein AGL666.7e-3665.69Show/hide
Query:  MGRVKLQIKRIENTTNRQVTFSKRRNGLIKKAYELSVLCDIDIALIMFSPSGRLSQFSGRRRIEDVLARYINLPDHDRGGPSIQNRFF-----------S
        MGRVKLQIKRIENTTNRQVTFSKRRNGLIKKAYELS+LCDIDIALIMFSPSGRLSQFSGRRRIEDVLARYINLPDHDRG   +QN+ F           +
Subjt:  MGRVKLQIKRIENTTNRQVTFSKRRNGLIKKAYELSVLCDIDIALIMFSPSGRLSQFSGRRRIEDVLARYINLPDHDRGGPSIQNRFF-----------S

Query:  TTAECCGDGLIDHGGEEEEASINSTSNNEIQIAESNL
          A+   +    +   EE      T  +E+Q+AE  L
Subjt:  TTAECCGDGLIDHGGEEEEASINSTSNNEIQIAESNL

A0A7J6WCL7 Agamous-like mads-box protein3.3e-3593.02Show/hide
Query:  MGRVKLQIKRIENTTNRQVTFSKRRNGLIKKAYELSVLCDIDIALIMFSPSGRLSQFSGRRRIEDVLARYINLPDHDRGGPSIQNR
        MGRVKLQIKRIEN TNRQVTFSKRRNGLIKKAYELSVLCDIDIALIMFSPSGRLS FSG+RRIEDVL RYINLPDHDRGG +IQNR
Subjt:  MGRVKLQIKRIENTTNRQVTFSKRRNGLIKKAYELSVLCDIDIALIMFSPSGRLSQFSGRRRIEDVLARYINLPDHDRGGPSIQNR

A0A7N0T665 MADS-box domain-containing protein5.7e-3584.62Show/hide
Query:  MGRVKLQIKRIENTTNRQVTFSKRRNGLIKKAYELSVLCDIDIALIMFSPSGRLSQFSGRRRIEDVLARYINLPDHDRGGPSIQNRFFSTT
        MGRVKLQIKRIEN TNRQVTFSKRRNGLIKKAYELS+LCDIDIALIMFSPSGRLS FSG+RRIEDVL RYINLPD DRGG S+   +  TT
Subjt:  MGRVKLQIKRIENTTNRQVTFSKRRNGLIKKAYELSVLCDIDIALIMFSPSGRLSQFSGRRRIEDVLARYINLPDHDRGGPSIQNRFFSTT

A0A7N2M0X5 MADS-box domain-containing protein1.3e-3692.94Show/hide
Query:  MGRVKLQIKRIENTTNRQVTFSKRRNGLIKKAYELSVLCDIDIALIMFSPSGRLSQFSGRRRIEDVLARYINLPDHDRGGPSIQN
        MGRVKLQIKRIEN TNRQVTFSKRRNGLIKKAYELS+LCDIDIALIMFSPSGRL+ FSG+RRIEDVLARYINLPDHDRGGPS QN
Subjt:  MGRVKLQIKRIENTTNRQVTFSKRRNGLIKKAYELSVLCDIDIALIMFSPSGRLSQFSGRRRIEDVLARYINLPDHDRGGPSIQN

W1NFJ1 MADS-box domain-containing protein8.7e-3684.78Show/hide
Query:  MGRVKLQIKRIENTTNRQVTFSKRRNGLIKKAYELSVLCDIDIALIMFSPSGRLSQFSGRRRIEDVLARYINLPDHDRGGPSIQNRFFSTTA
        MGRVKLQIK+IEN+TNRQVTFSKRRNGLIKKAYELS+LCDIDIALIMFSPSGRLSQFSG++RIEDVLARY+NLPDHDRGGP +QN+ +   A
Subjt:  MGRVKLQIKRIENTTNRQVTFSKRRNGLIKKAYELSVLCDIDIALIMFSPSGRLSQFSGRRRIEDVLARYINLPDHDRGGPSIQNRFFSTTA

SwissProt top hitse value%identityAlignment
A0A217EJJ0 Agamous-like MADS-box protein AGL119.4e-1957.65Show/hide
Query:  MGRVKLQIKRIENTTNRQVTFSKRRNGLIKKAYELSVLCDIDIALIMFSPSGRLSQFSGRRRIEDVLARYINL-PDHDRGGPSIQ
        MGR K++IKRIENTTNRQVTF KRRNGL+KKAYELSVLCD ++ALI+FS  GR+ ++S    I+  + RY     D   GG +++
Subjt:  MGRVKLQIKRIENTTNRQVTFSKRRNGLIKKAYELSVLCDIDIALIMFSPSGRLSQFSGRRRIEDVLARYINL-PDHDRGGPSIQ

F6I457 Agamous-like MADS-box protein AGL119.4e-1957.65Show/hide
Query:  MGRVKLQIKRIENTTNRQVTFSKRRNGLIKKAYELSVLCDIDIALIMFSPSGRLSQFSGRRRIEDVLARYINL-PDHDRGGPSIQ
        MGR K++IKRIENTTNRQVTF KRRNGL+KKAYELSVLCD ++ALI+FS  GR+ ++S    I+  + RY     D   GG +++
Subjt:  MGRVKLQIKRIENTTNRQVTFSKRRNGLIKKAYELSVLCDIDIALIMFSPSGRLSQFSGRRRIEDVLARYINL-PDHDRGGPSIQ

Q1PFC2 Agamous-like MADS-box protein AGL661.1e-3084.62Show/hide
Query:  MGRVKLQIKRIENTTNRQVTFSKRRNGLIKKAYELSVLCDIDIALIMFSPSGRLSQFSGRRRIEDVLARYINLPDHDR
        MGRVKL+IKRIENTTNRQVTFSKRRNGLIKKAYELS+LCDIDIAL+MFSPS RLS FSG+ RIEDV +RYINL D +R
Subjt:  MGRVKLQIKRIENTTNRQVTFSKRRNGLIKKAYELSVLCDIDIALIMFSPSGRLSQFSGRRRIEDVLARYINLPDHDR

Q7X9I0 Agamous-like MADS-box protein AGL655.0e-2058.23Show/hide
Query:  MGRVKLQIKRIENTTNRQVTFSKRRNGLIKKAYELSVLCDIDIALIMFSPSGRLSQFSGRRR-IEDVLARYINLPDHDR
        MGRVKL+IKR+E+T+NRQVT++KR+NG++KKA ELS+LCDIDI L+MFSP+GR + F G    IE+V++++  L   +R
Subjt:  MGRVKLQIKRIENTTNRQVTFSKRRNGLIKKAYELSVLCDIDIALIMFSPSGRLSQFSGRRR-IEDVLARYINLPDHDR

Q9LM46 Agamous-like MADS-box protein AGL1048.2e-3172.92Show/hide
Query:  MGRVKLQIKRIENTTNRQVTFSKRRNGLIKKAYELSVLCDIDIALIMFSPSGRLSQFSGRRRIEDVLARYINLPDHDRGG----------PSIQNR
        MGRVKL+IKRIENTTNRQVTFSKRRNGLIKKAYELS+LCDIDIALIMFSPS RLS FSG+ RIEDV +R+INLP  +R            P IQN+
Subjt:  MGRVKLQIKRIENTTNRQVTFSKRRNGLIKKAYELSVLCDIDIALIMFSPSGRLSQFSGRRRIEDVLARYINLPDHDRGG----------PSIQNR

Arabidopsis top hitse value%identityAlignment
AT1G18750.1 AGAMOUS-like 653.5e-2158.23Show/hide
Query:  MGRVKLQIKRIENTTNRQVTFSKRRNGLIKKAYELSVLCDIDIALIMFSPSGRLSQFSGRRR-IEDVLARYINLPDHDR
        MGRVKL+IKR+E+T+NRQVT++KR+NG++KKA ELS+LCDIDI L+MFSP+GR + F G    IE+V++++  L   +R
Subjt:  MGRVKLQIKRIENTTNRQVTFSKRRNGLIKKAYELSVLCDIDIALIMFSPSGRLSQFSGRRR-IEDVLARYINLPDHDR

AT1G22130.1 AGAMOUS-like 1045.8e-3272.92Show/hide
Query:  MGRVKLQIKRIENTTNRQVTFSKRRNGLIKKAYELSVLCDIDIALIMFSPSGRLSQFSGRRRIEDVLARYINLPDHDRGG----------PSIQNR
        MGRVKL+IKRIENTTNRQVTFSKRRNGLIKKAYELS+LCDIDIALIMFSPS RLS FSG+ RIEDV +R+INLP  +R            P IQN+
Subjt:  MGRVKLQIKRIENTTNRQVTFSKRRNGLIKKAYELSVLCDIDIALIMFSPSGRLSQFSGRRRIEDVLARYINLPDHDRGG----------PSIQNR

AT1G77950.1 AGAMOUS-like 679.3e-3078.21Show/hide
Query:  MGRVKLQIKRIENTTNRQVTFSKRRNGLIKKAYELSVLCDIDIALIMFSPSGRLSQFSGRRRIEDVLARYINLPDHDR
        MGRVKL++KRIE +TNRQ+TFSKR+ GLIKKAYELS LCDID+AL+MFSPS RL  FSG+ RIEDVLARYINLPD +R
Subjt:  MGRVKLQIKRIENTTNRQVTFSKRRNGLIKKAYELSVLCDIDIALIMFSPSGRLSQFSGRRRIEDVLARYINLPDHDR

AT1G77950.2 AGAMOUS-like 679.3e-3078.21Show/hide
Query:  MGRVKLQIKRIENTTNRQVTFSKRRNGLIKKAYELSVLCDIDIALIMFSPSGRLSQFSGRRRIEDVLARYINLPDHDR
        MGRVKL++KRIE +TNRQ+TFSKR+ GLIKKAYELS LCDID+AL+MFSPS RL  FSG+ RIEDVLARYINLPD +R
Subjt:  MGRVKLQIKRIENTTNRQVTFSKRRNGLIKKAYELSVLCDIDIALIMFSPSGRLSQFSGRRRIEDVLARYINLPDHDR

AT1G77980.1 AGAMOUS-like 667.6e-3284.62Show/hide
Query:  MGRVKLQIKRIENTTNRQVTFSKRRNGLIKKAYELSVLCDIDIALIMFSPSGRLSQFSGRRRIEDVLARYINLPDHDR
        MGRVKL+IKRIENTTNRQVTFSKRRNGLIKKAYELS+LCDIDIAL+MFSPS RLS FSG+ RIEDV +RYINL D +R
Subjt:  MGRVKLQIKRIENTTNRQVTFSKRRNGLIKKAYELSVLCDIDIALIMFSPSGRLSQFSGRRRIEDVLARYINLPDHDR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGAGAGTTAAGTTGCAAATCAAGAGAATTGAAAATACAACGAATCGACAAGTCACTTTTTCCAAACGCAGAAATGGACTCATCAAAAAAGCTTATGAACTCTCTGT
TCTTTGCGATATTGATATTGCTCTTATTATGTTCTCTCCTTCCGGCCGCCTCAGCCAGTTCTCCGGCCGCCGCAGAATTGAGGATGTGCTTGCTCGTTACATAAATTTGC
CTGATCATGATAGAGGAGGCCCTTCAATCCAAAATCGGTTCTTCTCGACAACCGCAGAATGTTGTGGAGACGGGTTGATTGATCATGGAGGAGAAGAAGAGGAAGCGTCA
ATTAACTCTACCTCGAATAACGAAATCCAAATAGCGGAATCAAATTTGGAACGTGAATCATTAGGAAATCGAAAAAAGGGATTTGAGAGTTGTTCTCATTTGAAAATGAC
GAAATTGAGAGTGAAAATCATAAAGAAATTGATACAGAAGAAGCTACGAAGTGGGAAGAGAGTTGCAAGGAAGAAGATGAAGATGTTTGGGAAACTGAAGAAGAAGAATA
GGATATCAATGATGAGGAAACGGGAAGAAGAAAATGAGAAAGAAGAATAG
mRNA sequenceShow/hide mRNA sequence
ATGGGGAGAGTTAAGTTGCAAATCAAGAGAATTGAAAATACAACGAATCGACAAGTCACTTTTTCCAAACGCAGAAATGGACTCATCAAAAAAGCTTATGAACTCTCTGT
TCTTTGCGATATTGATATTGCTCTTATTATGTTCTCTCCTTCCGGCCGCCTCAGCCAGTTCTCCGGCCGCCGCAGAATTGAGGATGTGCTTGCTCGTTACATAAATTTGC
CTGATCATGATAGAGGAGGCCCTTCAATCCAAAATCGGTTCTTCTCGACAACCGCAGAATGTTGTGGAGACGGGTTGATTGATCATGGAGGAGAAGAAGAGGAAGCGTCA
ATTAACTCTACCTCGAATAACGAAATCCAAATAGCGGAATCAAATTTGGAACGTGAATCATTAGGAAATCGAAAAAAGGGATTTGAGAGTTGTTCTCATTTGAAAATGAC
GAAATTGAGAGTGAAAATCATAAAGAAATTGATACAGAAGAAGCTACGAAGTGGGAAGAGAGTTGCAAGGAAGAAGATGAAGATGTTTGGGAAACTGAAGAAGAAGAATA
GGATATCAATGATGAGGAAACGGGAAGAAGAAAATGAGAAAGAAGAATAG
Protein sequenceShow/hide protein sequence
MGRVKLQIKRIENTTNRQVTFSKRRNGLIKKAYELSVLCDIDIALIMFSPSGRLSQFSGRRRIEDVLARYINLPDHDRGGPSIQNRFFSTTAECCGDGLIDHGGEEEEAS
INSTSNNEIQIAESNLERESLGNRKKGFESCSHLKMTKLRVKIIKKLIQKKLRSGKRVARKKMKMFGKLKKKNRISMMRKREEENEKEE