; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

HG10001966 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10001966
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description40S ribosomal protein SA
Genome locationChr11:2191797..2193780
RNA-Seq ExpressionHG10001966
SyntenyHG10001966
Gene Ontology termsGO:0000028 - ribosomal small subunit assembly (biological process)
GO:0002181 - cytoplasmic translation (biological process)
GO:0022627 - cytosolic small ribosomal subunit (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR001865 - Ribosomal protein S2
IPR005707 - Ribosomal protein S2, eukaryotic/archaeal
IPR018130 - Ribosomal protein S2, conserved site
IPR023591 - Ribosomal protein S2, flavodoxin-like domain superfamily
IPR027498 - Ribosomal protein S2, eukaryotic


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6600605.1 40S ribosomal protein SA, partial [Cucurbita argyrosperma subsp. sororia]1.0e-15190.4Show/hide
Query:  MATGTEQRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPQEIIVQSARPYGQRAVLKFAQHTGAHA
        MATGTEQRQL+QKEADIQMMLAAEVHLGTKNC+FQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPQ+IIVQSARPYGQRAVLKFAQ+TGAHA
Subjt:  MATGTEQRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPQEIIVQSARPYGQRAVLKFAQHTGAHA

Query:  IAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTVRPGHKWDVM
        IAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKE ALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTVRPGHKWDVM
Subjt:  IAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTVRPGHKWDVM

Query:  VDLFFYREPEEVKEKEEEEAVAPPDYGIADFGSARLAVDPWVPDAQWDAPAVVP-----AAAAPVSNVEWAQEPV---GVADGWEAAVAPPAPSLEAGAP
        VDLFFYREPEE KEKEEE+AVAPPDYGIADFG+A L  D WV DAQWDAP +VP     AAAAPVSNVEWA EPV   G ADGW+ A APPAP LEAGAP
Subjt:  VDLFFYREPEEVKEKEEEEAVAPPDYGIADFGSARLAVDPWVPDAQWDAPAVVP-----AAAAPVSNVEWAQEPV---GVADGWEAAVAPPAPSLEAGAP

Query:  PA
        PA
Subjt:  PA

KAG7031241.1 40S ribosomal protein SA, partial [Cucurbita argyrosperma subsp. argyrosperma]2.3e-15189.47Show/hide
Query:  MATGTEQRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPQEIIVQSARPYGQRAVLKFAQHTGAHA
        MATGTEQRQL+QKEADIQMMLAAEVHLGTKNC+FQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPQ+IIVQSARPYGQRAVLKFAQ+TGAHA
Subjt:  MATGTEQRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPQEIIVQSARPYGQRAVLKFAQHTGAHA

Query:  IAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTVRPGHKWDVM
        IAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKE ALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTVRPGHKWDVM
Subjt:  IAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTVRPGHKWDVM

Query:  VDLFFYREPEEVKEKEEEEAVAPPDYGIADFGSARLAVDPWVPDAQWDAPAVVP-----AAAAPVSNVEWAQEPV---GVADGWEAAVAPPAPSLEAGAP
        VDLFFYREPEE KEKEEE+AVAPPDYGIADFG+A L  D WV DAQWDAP +VP     AAAAPVSNVEWA EPV   G ADGW+ A APPAP LEAG P
Subjt:  VDLFFYREPEEVKEKEEEEAVAPPDYGIADFGSARLAVDPWVPDAQWDAPAVVP-----AAAAPVSNVEWAQEPV---GVADGWEAAVAPPAPSLEAGAP

Query:  PATD
        PA +
Subjt:  PATD

XP_008453731.1 PREDICTED: 40S ribosomal protein SA-like [Cucumis melo]1.4e-15693.29Show/hide
Query:  MATGTEQRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPQEIIVQSARPYGQRAVLKFAQHTGAHA
        MATG EQRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENP++IIVQSARPYGQRAVLKFAQ+TGAHA
Subjt:  MATGTEQRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPQEIIVQSARPYGQRAVLKFAQHTGAHA

Query:  IAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTVRPGHKWDVM
        IAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTVRPG+KWDVM
Subjt:  IAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTVRPGHKWDVM

Query:  VDLFFYREPEEVKEKEEEEAVAPPDYGIADFGSARLAVDPWVPDAQWDAPAVVP-AAAAPVSNVEWAQEPVGVADGWEAAVAPPAPSLEAGAPPATDW
        VDLFFYREPEEVKEKEEEEAVAPPDYGIADFGSA LAVD WVPDAQWDA  V P AAAA VSNVEWAQEPVG ADGW  A+ PPAPSLEA APP++DW
Subjt:  VDLFFYREPEEVKEKEEEEAVAPPDYGIADFGSARLAVDPWVPDAQWDAPAVVP-AAAAPVSNVEWAQEPVGVADGWEAAVAPPAPSLEAGAPPATDW

XP_011653139.1 40S ribosomal protein SA [Cucumis sativus]7.6e-15592.62Show/hide
Query:  MATGTEQRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPQEIIVQSARPYGQRAVLKFAQHTGAHA
        MATGTEQ QLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPQ+IIVQSARPYGQRAVLKFAQ+TGAHA
Subjt:  MATGTEQRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPQEIIVQSARPYGQRAVLKFAQHTGAHA

Query:  IAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTVRPGHKWDVM
        IAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTVRPG+KWDVM
Subjt:  IAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTVRPGHKWDVM

Query:  VDLFFYREPEEVKEKEEEEAVAPPDYGIADFGSARLAVDPWVPDAQWDAPAVVP-AAAAPVSNVEWAQEPVGVADGWEAAVAPPAPSLEAGAPPATDW
        VDLFFYREPEEVKEKEEEEAVAPPDYGIADFGSA +AVD WVPDAQW AP V P AAAA VSN EWAQE V  ADGW  A+ PPAPSLEA APPA+DW
Subjt:  VDLFFYREPEEVKEKEEEEAVAPPDYGIADFGSARLAVDPWVPDAQWDAPAVVP-AAAAPVSNVEWAQEPVGVADGWEAAVAPPAPSLEAGAPPATDW

XP_022942879.1 40S ribosomal protein SA-like [Cucurbita moschata]6.0e-15291Show/hide
Query:  MATGTEQRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPQEIIVQSARPYGQRAVLKFAQHTGAHA
        MATGTEQRQL+QKEADIQMMLAAEVHLGTKNC+FQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPQ+IIVQSARPYGQRAVLKFAQ+TGAHA
Subjt:  MATGTEQRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPQEIIVQSARPYGQRAVLKFAQHTGAHA

Query:  IAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTVRPGHKWDVM
        IAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKE ALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTVRPGHKWDVM
Subjt:  IAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTVRPGHKWDVM

Query:  VDLFFYREPEEVKEKEEEEAVAPPDYGIADFGSARLAVDPWVPDAQWDAPAVVP---AAAAPVSNVEWAQEPV---GVADGWEAAVAPPAPSLEAGAPPA
        VDLFFYREPEE KEKEEE+AVAPPDYGIADFG+A L  D WV DAQWDAP +VP   AAAAPVSNVEWA EPV   G ADGW+ A APPAP LEAGAPPA
Subjt:  VDLFFYREPEEVKEKEEEEAVAPPDYGIADFGSARLAVDPWVPDAQWDAPAVVP---AAAAPVSNVEWAQEPV---GVADGWEAAVAPPAPSLEAGAPPA

TrEMBL top hitse value%identityAlignment
A0A0A0KUD9 40S ribosomal protein SA3.7e-15592.62Show/hide
Query:  MATGTEQRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPQEIIVQSARPYGQRAVLKFAQHTGAHA
        MATGTEQ QLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPQ+IIVQSARPYGQRAVLKFAQ+TGAHA
Subjt:  MATGTEQRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPQEIIVQSARPYGQRAVLKFAQHTGAHA

Query:  IAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTVRPGHKWDVM
        IAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTVRPG+KWDVM
Subjt:  IAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTVRPGHKWDVM

Query:  VDLFFYREPEEVKEKEEEEAVAPPDYGIADFGSARLAVDPWVPDAQWDAPAVVP-AAAAPVSNVEWAQEPVGVADGWEAAVAPPAPSLEAGAPPATDW
        VDLFFYREPEEVKEKEEEEAVAPPDYGIADFGSA +AVD WVPDAQW AP V P AAAA VSN EWAQE V  ADGW  A+ PPAPSLEA APPA+DW
Subjt:  VDLFFYREPEEVKEKEEEEAVAPPDYGIADFGSARLAVDPWVPDAQWDAPAVVP-AAAAPVSNVEWAQEPVGVADGWEAAVAPPAPSLEAGAPPATDW

A0A1S3BXR8 40S ribosomal protein SA6.7e-15793.29Show/hide
Query:  MATGTEQRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPQEIIVQSARPYGQRAVLKFAQHTGAHA
        MATG EQRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENP++IIVQSARPYGQRAVLKFAQ+TGAHA
Subjt:  MATGTEQRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPQEIIVQSARPYGQRAVLKFAQHTGAHA

Query:  IAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTVRPGHKWDVM
        IAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTVRPG+KWDVM
Subjt:  IAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTVRPGHKWDVM

Query:  VDLFFYREPEEVKEKEEEEAVAPPDYGIADFGSARLAVDPWVPDAQWDAPAVVP-AAAAPVSNVEWAQEPVGVADGWEAAVAPPAPSLEAGAPPATDW
        VDLFFYREPEEVKEKEEEEAVAPPDYGIADFGSA LAVD WVPDAQWDA  V P AAAA VSNVEWAQEPVG ADGW  A+ PPAPSLEA APP++DW
Subjt:  VDLFFYREPEEVKEKEEEEAVAPPDYGIADFGSARLAVDPWVPDAQWDAPAVVP-AAAAPVSNVEWAQEPVGVADGWEAAVAPPAPSLEAGAPPATDW

A0A5A7TNP4 40S ribosomal protein SA6.7e-15793.29Show/hide
Query:  MATGTEQRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPQEIIVQSARPYGQRAVLKFAQHTGAHA
        MATG EQRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENP++IIVQSARPYGQRAVLKFAQ+TGAHA
Subjt:  MATGTEQRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPQEIIVQSARPYGQRAVLKFAQHTGAHA

Query:  IAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTVRPGHKWDVM
        IAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTVRPG+KWDVM
Subjt:  IAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTVRPGHKWDVM

Query:  VDLFFYREPEEVKEKEEEEAVAPPDYGIADFGSARLAVDPWVPDAQWDAPAVVP-AAAAPVSNVEWAQEPVGVADGWEAAVAPPAPSLEAGAPPATDW
        VDLFFYREPEEVKEKEEEEAVAPPDYGIADFGSA LAVD WVPDAQWDA  V P AAAA VSNVEWAQEPVG ADGW  A+ PPAPSLEA APP++DW
Subjt:  VDLFFYREPEEVKEKEEEEAVAPPDYGIADFGSARLAVDPWVPDAQWDAPAVVP-AAAAPVSNVEWAQEPVGVADGWEAAVAPPAPSLEAGAPPATDW

A0A6J1C6Q9 40S ribosomal protein SA1.4e-15191.03Show/hide
Query:  MATGTEQRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPQEIIVQSARPYGQRAVLKFAQHTGAHA
        MATGT QRQLSQKEADIQMMLAAEVHLGTKNC+FQMERYVFKRRNDGIYIINLGKTW+KLQMAARVIVAIENPQ+IIVQSARPYGQRAVLKFAQ+TGAHA
Subjt:  MATGTEQRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPQEIIVQSARPYGQRAVLKFAQHTGAHA

Query:  IAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTVRPGHKWDVM
        IAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKE ALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGT+R GHKWDVM
Subjt:  IAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTVRPGHKWDVM

Query:  VDLFFYREPEEVKEKEEEEAVAPPDYGIADFGSARLAVDPWVPDAQWDAPAVVP-AAAAPVSNVEWAQEPV--GVADGWEAAVA-PPAPSLEAGAPPATD
        VDLFFYREPEE KE EEEEAVAPPDYGIADFG+A LAVD W PDAQW A  VVP AAAAP SNVEWAQEPV  G ADGW+AAVA PPAP +EAGAPPA+D
Subjt:  VDLFFYREPEEVKEKEEEEAVAPPDYGIADFGSARLAVDPWVPDAQWDAPAVVP-AAAAPVSNVEWAQEPV--GVADGWEAAVA-PPAPSLEAGAPPATD

Query:  W
        W
Subjt:  W

A0A6J1FSL7 40S ribosomal protein SA2.9e-15291Show/hide
Query:  MATGTEQRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPQEIIVQSARPYGQRAVLKFAQHTGAHA
        MATGTEQRQL+QKEADIQMMLAAEVHLGTKNC+FQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPQ+IIVQSARPYGQRAVLKFAQ+TGAHA
Subjt:  MATGTEQRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPQEIIVQSARPYGQRAVLKFAQHTGAHA

Query:  IAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTVRPGHKWDVM
        IAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKE ALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTVRPGHKWDVM
Subjt:  IAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTVRPGHKWDVM

Query:  VDLFFYREPEEVKEKEEEEAVAPPDYGIADFGSARLAVDPWVPDAQWDAPAVVP---AAAAPVSNVEWAQEPV---GVADGWEAAVAPPAPSLEAGAPPA
        VDLFFYREPEE KEKEEE+AVAPPDYGIADFG+A L  D WV DAQWDAP +VP   AAAAPVSNVEWA EPV   G ADGW+ A APPAP LEAGAPPA
Subjt:  VDLFFYREPEEVKEKEEEEAVAPPDYGIADFGSARLAVDPWVPDAQWDAPAVVP---AAAAPVSNVEWAQEPV---GVADGWEAAVAPPAPSLEAGAPPA

SwissProt top hitse value%identityAlignment
A5BUU4 40S ribosomal protein SA4.5e-12676.43Show/hide
Query:  MATGTEQRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPQEIIVQSARPYGQRAVLKFAQHTGAHA
        MAT T  R LSQKE DIQMMLAAEVHLGTKNC+FQMERYVFKRRNDGIYIINLGKTWEKLQ+AARVIVAIENP++IIVQSARPYGQRAVLKFAQ+TGAHA
Subjt:  MATGTEQRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPQEIIVQSARPYGQRAVLKFAQHTGAHA

Query:  IAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTVRPGHKWDVM
        IAGRHTPGTFTNQLQTSF+EPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMR T+ PGHKWDVM
Subjt:  IAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTVRPGHKWDVM

Query:  VDLFFYREPEEVKEKEEEEAVAPPDYGIADFGSAR---LAVDPW---VPDA-QW--DAPAVVPAAAAPVSN-VEWAQEPVGV---ADGWEAAVAPPA---
        VDLFFYREPEE KE+E +E VA PDYGI D+ +     L    W   + DA QW  D PAV P  A P SN  + A  P  V    DGW+AA APP    
Subjt:  VDLFFYREPEEVKEKEEEEAVAPPDYGIADFGSAR---LAVDPW---VPDA-QW--DAPAVVPAAAAPVSN-VEWAQEPVGV---ADGWEAAVAPPA---

Query:  PSLEAGAPPATDWQ
        P +  G PP   W+
Subjt:  PSLEAGAPPATDWQ

O22518 40S ribosomal protein SA1.6e-12378.47Show/hide
Query:  ATGTEQRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPQEIIVQSARPYGQRAVLKFAQHTGAHAI
        A     RQLSQKEADIQMMLAA+VHLGTKNCDFQMERY+FKRRNDGIYIINLGKTWEKLQ+AARVIVAIENPQ+IIVQSARPYGQRAVLKFAQ+TGAHAI
Subjt:  ATGTEQRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPQEIIVQSARPYGQRAVLKFAQHTGAHAI

Query:  AGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTVRPGHKWDVMV
        AGRHTPGTFTNQLQTSF+EPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGT+RPG KWDVMV
Subjt:  AGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTVRPGHKWDVMV

Query:  DLFFYREPEEVKEKEEEEAVAPPDYGIADFGSARLAVD---PWVPDAQWDAPAVVPAAAAPVSNVEW---AQEPVGVADGWEAAVAPP
        DLFFYREPEE K++EEEEA A  DY I DF +  +A D   P   D  W      P  A P   V W   A+ P      W  AV PP
Subjt:  DLFFYREPEEVKEKEEEEAVAPPDYGIADFGSARLAVD---PWVPDAQWDAPAVVPAAAAPVSNVEW---AQEPVGVADGWEAAVAPP

O65751 40S ribosomal protein SA6.7e-12275.66Show/hide
Query:  MATGT-EQRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPQEIIVQSARPYGQRAVLKFAQHTGAH
        MAT T   RQL+QKEADIQMMLAA+VHLGTKNC+FQMERY+FKRRNDGIYIINLGKTW+KL +AAR+IVAIEN Q+IIVQSARPYGQRAVLKFAQ+TGAH
Subjt:  MATGT-EQRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPQEIIVQSARPYGQRAVLKFAQHTGAH

Query:  AIAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTVRPGHKWDV
        AIAGRHTPGTFTNQLQTSF+EPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPM YVDIGIPANNKGKHSIGCLFWLLARMVLQMRGT+RPG KWDV
Subjt:  AIAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTVRPGHKWDV

Query:  MVDLFFYREPEEVKEKEEEEAVAPPDYGIADFGSARLAVD---PWVPDAQWDAPAVVPAAAAPVSNVEWAQEPVGVADGWEAAVAPPAPSLEAG--APPA
        MVDLFFYREPEE K+ EE+E VA PDY IADF  + +  D   P   D  W+     P  A P   V WA  P  VA  W  AV PP     AG  + PA
Subjt:  MVDLFFYREPEEVKEKEEEEAVAPPDYGIADFGSARLAVD---PWVPDAQWDAPAVVPAAAAPVSNVEWAQEPVGVADGWEAAVAPPAPSLEAG--APPA

Query:  TDWQ
        T W+
Subjt:  TDWQ

O80377 40S ribosomal protein SA6.7e-12274.83Show/hide
Query:  MATGTEQRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPQEIIVQSARPYGQRAVLKFAQHTGAHA
        MA+G   R+LS  EADIQMM AAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKL +AARVIV+IENPQ+IIVQSARPYGQRAVLKFAQ+TGAHA
Subjt:  MATGTEQRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPQEIIVQSARPYGQRAVLKFAQHTGAHA

Query:  IAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTVRPGHKWDVM
        IAGRHTPGTFTNQLQTSF+EPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRG +  GHKW+VM
Subjt:  IAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTVRPGHKWDVM

Query:  VDLFFYREPEEVKEKEEEEAVAPPDYGIADFGSARL-AVDPW--VPDAQWDAPAVVPAAAAPVSNVEWAQEPVGVADGWEAAVAPPAP-SLEAGAPPATD
        VDLFFYREPEE K++EEE+ +   DY +AD+ +A +   D W  +PDAQW    V PA +A V    W        DGW+AA APP P ++    P  T 
Subjt:  VDLFFYREPEEVKEKEEEEAVAPPDYGIADFGSARL-AVDPW--VPDAQWDAPAVVPAAAAPVSNVEWAQEPVGVADGWEAAVAPPAP-SLEAGAPPATD

Query:  WQ
        W+
Subjt:  WQ

Q9ZSR8 40S ribosomal protein SA6.5e-11774.82Show/hide
Query:  QLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPQEIIVQSARPYGQRAVLKFAQHTGAHAIAGRHTPG
        QLSQKEADI+MM AAEVHLGTKNC++QMERYVFKRRNDGIYI NLGKTWEKL MAARVIVAIENPQ+IIVQSARPYGQRAVLKFAQ+TGA+AIAGRHTPG
Subjt:  QLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPQEIIVQSARPYGQRAVLKFAQHTGAHAIAGRHTPG

Query:  TFTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTVRPGHKWDVMVDLFFYRE
        TFTNQ+QTSF+EPRLLILTDPRTDHQPIKE ALGNIP IAFCDTDSPMR+VDIGIPANNKGKHSIGCLFWLLARMVLQMRGT+RP  KWDVMVDLFFYRE
Subjt:  TFTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTVRPGHKWDVMVDLFFYRE

Query:  PEEVKEKEEEEAVAPPDYGI--ADFGSARLAVDPWVPDAQWDAPAVVPAAAAPVSNVEW--AQEPVGVADGWEAAVAP
        PEE K ++E+E     ++G+   ++G         +PDA W   A  P +AAP +   W  +  P     GW+AAV P
Subjt:  PEEVKEKEEEEAVAPPDYGI--ADFGSARLAVDPWVPDAQWDAPAVVPAAAAPVSNVEW--AQEPVGVADGWEAAVAP

Arabidopsis top hitse value%identityAlignment
AT1G72370.1 40s ribosomal protein SA1.4e-11774.14Show/hide
Query:  QLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPQEIIVQSARPYGQRAVLKFAQHTGAHAIAGRHTPG
        QLSQKEAD++MM AAEVHLGTKNC++QMERYVFKRRNDGIYI NLGKTWEKLQMAARVIVAIENPQ+IIVQSARPYGQRAVLKFAQ+TGA+AIAGRHTPG
Subjt:  QLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPQEIIVQSARPYGQRAVLKFAQHTGAHAIAGRHTPG

Query:  TFTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTVRPGHKWDVMVDLFFYRE
        TFTNQ+QTSF+EPRLLILTDPRTDHQPIKE ALGNIP IAFCDTDSPMR+VDIGIPANNKGKHSIGCLFWLLARMVLQMRGT+  G KWDVMVDLFFYRE
Subjt:  TFTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTVRPGHKWDVMVDLFFYRE

Query:  PEEVKEKEEEEAVAPPDYG---IADFGSARLAVDPW----VPDAQWDAPAVVPAAAAPVSNVEWAQEPVGVAD-GWEAAVAPPAPSLEAG
        PEE K ++E+EA    +YG     ++G   +  D W    +PDA W      P +AAP +   W+      AD GWEAA APP+ +  AG
Subjt:  PEEVKEKEEEEAVAPPDYG---IADFGSARLAVDPW----VPDAQWDAPAVVPAAAAPVSNVEWAQEPVGVAD-GWEAAVAPPAPSLEAG

AT1G72370.2 40s ribosomal protein SA6.7e-11774.05Show/hide
Query:  QLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPQEIIVQSARPYGQRAVLKFAQHTGAHAIAGRHTPG
        QLSQKEAD++MM AAEVHLGTKNC++QMERYVFKRRNDGIYI NLGKTWEKLQMAARVIVAIENPQ+IIVQSARPYGQRAVLKFAQ+TGA+AIAGRHTPG
Subjt:  QLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPQEIIVQSARPYGQRAVLKFAQHTGAHAIAGRHTPG

Query:  TFTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTVRPGHKWDVMVDLFFYRE
        TFTNQ+QTSF+EPRLLILTDPRTDHQPIKE ALGNIP IAFCDTDSPMR+VDIGIPANNKGKHSIGCLFWLLARMVLQMRGT+  G KWDVMVDLFFYRE
Subjt:  TFTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTVRPGHKWDVMVDLFFYRE

Query:  PEEVKEKEEEEAVAPPDYG---IADFGSARLAVDPW----VPDAQWDAPAVVPAAAAPVSNVEWAQEPVGVADGWEAAVAPPAPSLEAG
        PEE K ++E+EA    +YG     ++G   +  D W    +PDA W      P +AAP +   W+    G   GWEAA APP+ +  AG
Subjt:  PEEVKEKEEEEAVAPPDYG---IADFGSARLAVDPW----VPDAQWDAPAVVPAAAAPVSNVEWAQEPVGVADGWEAAVAPPAPSLEAG

AT3G04770.1 40s ribosomal protein SA B2.6e-10086.87Show/hide
Query:  TEQRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPQEIIVQSARPYGQRAVLKFAQHTGAHAIAGR
        T  RQ+S+KEADIQMML+A+VHLGTKNC++QMERYVFKRR+DGIYIINLGKTW+KLQMAARVIVAIENP++IIVQSARPYGQRAVLKFAQ+TG +AIAGR
Subjt:  TEQRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPQEIIVQSARPYGQRAVLKFAQHTGAHAIAGR

Query:  HTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTVRPGHKWDVMVD
        HTPGTFTNQ+QTSF+EPRLLILTDPRTDHQPIKE ALGNIPTIAFCDTDSPM +VDIGIPANNKGKHSIGCLFWLLARMVLQMRGT+    KWDVMV+
Subjt:  HTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTVRPGHKWDVMVD

AT3G04770.2 40s ribosomal protein SA B1.1e-11473.24Show/hide
Query:  TEQRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPQEIIVQSARPYGQRAVLKFAQHTGAHAIAGR
        T  RQ+S+KEADIQMML+A+VHLGTKNC++QMERYVFKRR+DGIYIINLGKTW+KLQMAARVIVAIENP++IIVQSARPYGQRAVLKFAQ+TG +AIAGR
Subjt:  TEQRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPQEIIVQSARPYGQRAVLKFAQHTGAHAIAGR

Query:  HTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTVRPGHKWDVMVDLF
        HTPGTFTNQ+QTSF+EPRLLILTDPRTDHQPIKE ALGNIPTIAFCDTDSPM +VDIGIPANNKGKHSIGCLFWLLARMVLQMRGT+    KWDVMVDLF
Subjt:  HTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTVRPGHKWDVMVDLF

Query:  FYREPEEVKEKEEEEAVAPPDYGIADFGSARLAVDPW----VPDAQWDAPAVVPAAAAPVSNVEWAQEPVGVADGWEAAVAPPA
        FYREPEE K++ +EEA    DYG+       +  D W    + DA W      P +AAP   V        VA GWEAA  P A
Subjt:  FYREPEEVKEKEEEEAVAPPDYGIADFGSARLAVDPW----VPDAQWDAPAVVPAAAAPVSNVEWAQEPVGVADGWEAAVAPPA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGACTGGAACAGAACAGCGTCAACTCTCGCAGAAGGAGGCCGACATTCAGATGATGTTGGCCGCCGAGGTTCATCTAGGCACGAAAAACTGCGACTTCCAAATGGA
GCGATACGTTTTCAAGCGCCGGAATGATGGAATCTACATTATTAACCTGGGTAAAACATGGGAGAAACTTCAGATGGCTGCTAGAGTTATTGTGGCTATTGAGAATCCTC
AAGAAATTATTGTTCAGTCTGCTAGGCCTTATGGTCAGAGAGCTGTTTTGAAGTTTGCTCAACACACTGGTGCTCATGCAATTGCTGGGAGGCACACCCCTGGAACATTC
ACCAATCAGCTTCAGACCTCATTCAATGAGCCACGTCTTCTGATACTTACTGATCCTAGAACTGATCATCAGCCCATCAAGGAAGCTGCCCTTGGAAACATTCCCACAAT
TGCCTTTTGTGACACTGATTCGCCAATGCGTTATGTTGATATCGGGATTCCAGCTAATAACAAGGGGAAACACAGCATAGGATGTCTATTCTGGCTTCTTGCAAGGATGG
TTTTGCAGATGCGTGGAACAGTTCGTCCTGGGCACAAATGGGACGTGATGGTGGATTTGTTTTTCTACCGGGAGCCCGAGGAGGTGAAGGAGAAAGAAGAAGAAGAGGCT
GTTGCACCACCAGATTATGGCATTGCAGATTTTGGTTCTGCTCGGCTGGCTGTAGATCCGTGGGTTCCTGATGCTCAGTGGGATGCCCCTGCTGTGGTTCCAGCTGCTGC
TGCTCCAGTTTCTAATGTTGAGTGGGCCCAAGAGCCAGTGGGAGTAGCAGATGGATGGGAGGCTGCCGTAGCACCACCAGCACCTTCACTTGAAGCTGGTGCACCTCCTG
CCACCGATTGGCAATAA
mRNA sequenceShow/hide mRNA sequence
ATGGCGACTGGAACAGAACAGCGTCAACTCTCGCAGAAGGAGGCCGACATTCAGATGATGTTGGCCGCCGAGGTTCATCTAGGCACGAAAAACTGCGACTTCCAAATGGA
GCGATACGTTTTCAAGCGCCGGAATGATGGAATCTACATTATTAACCTGGGTAAAACATGGGAGAAACTTCAGATGGCTGCTAGAGTTATTGTGGCTATTGAGAATCCTC
AAGAAATTATTGTTCAGTCTGCTAGGCCTTATGGTCAGAGAGCTGTTTTGAAGTTTGCTCAACACACTGGTGCTCATGCAATTGCTGGGAGGCACACCCCTGGAACATTC
ACCAATCAGCTTCAGACCTCATTCAATGAGCCACGTCTTCTGATACTTACTGATCCTAGAACTGATCATCAGCCCATCAAGGAAGCTGCCCTTGGAAACATTCCCACAAT
TGCCTTTTGTGACACTGATTCGCCAATGCGTTATGTTGATATCGGGATTCCAGCTAATAACAAGGGGAAACACAGCATAGGATGTCTATTCTGGCTTCTTGCAAGGATGG
TTTTGCAGATGCGTGGAACAGTTCGTCCTGGGCACAAATGGGACGTGATGGTGGATTTGTTTTTCTACCGGGAGCCCGAGGAGGTGAAGGAGAAAGAAGAAGAAGAGGCT
GTTGCACCACCAGATTATGGCATTGCAGATTTTGGTTCTGCTCGGCTGGCTGTAGATCCGTGGGTTCCTGATGCTCAGTGGGATGCCCCTGCTGTGGTTCCAGCTGCTGC
TGCTCCAGTTTCTAATGTTGAGTGGGCCCAAGAGCCAGTGGGAGTAGCAGATGGATGGGAGGCTGCCGTAGCACCACCAGCACCTTCACTTGAAGCTGGTGCACCTCCTG
CCACCGATTGGCAATAA
Protein sequenceShow/hide protein sequence
MATGTEQRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPQEIIVQSARPYGQRAVLKFAQHTGAHAIAGRHTPGTF
TNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTVRPGHKWDVMVDLFFYREPEEVKEKEEEEA
VAPPDYGIADFGSARLAVDPWVPDAQWDAPAVVPAAAAPVSNVEWAQEPVGVADGWEAAVAPPAPSLEAGAPPATDWQ