; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

HG10001995 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10001995
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionD-2-hydroxyglutarate dehydrogenase, mitochondrial
Genome locationChr11:2478966..2479720
RNA-Seq ExpressionHG10001995
SyntenyHG10001995
Gene Ontology termsGO:0006807 - nitrogen compound metabolic process (biological process)
GO:0009853 - photorespiration (biological process)
GO:0047545 - 2-hydroxyglutarate dehydrogenase activity (molecular function)
GO:0051990 - (R)-2-hydroxyglutarate dehydrogenase activity (molecular function)
GO:0071949 - FAD binding (molecular function)
InterPro domainsIPR016167 - FAD-binding, type PCMH, subdomain 1
IPR036318 - FAD-binding, type PCMH-like superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004146548.2 D-2-hydroxyglutarate dehydrogenase, mitochondrial isoform X1 [Cucumis sativus]1.6e-6384Show/hide
Query:  MITTTMRKKSASFLFRYSRFFHSDQPLNLNHKNSLLRSGTSLCAPISKYFGSIPGCRKAFQASAINYLRMPSGFQFRRFTSLSSGVQRNPSFSRLNSDDI
        M+TTTMRKKSA FLF YSR FHS QPLNL+H NSLLRSGTS C PIS+YFGSI  CRKAFQASAIN+  +PSGF+FRR  SLSS VQRNPSFSRLNSDDI
Subjt:  MITTTMRKKSASFLFRYSRFFHSDQPLNLNHKNSLLRSGTSLCAPISKYFGSIPGCRKAFQASAINYLRMPSGFQFRRFTSLSSGVQRNPSFSRLNSDDI

Query:  DFFRSILGEKNVVQDEDRLLDANTDWLRKYRGSSKLLLQPRSTEEVAHVL
        +FFRSILGEKNVVQDEDRLLDANTDWLRKYRGSSKLLLQPRSTEEV+ +L
Subjt:  DFFRSILGEKNVVQDEDRLLDANTDWLRKYRGSSKLLLQPRSTEEVAHVL

XP_008452115.1 PREDICTED: D-2-hydroxyglutarate dehydrogenase, mitochondrial isoform X1 [Cucumis melo]1.1e-6182Show/hide
Query:  MITTTMRKKSASFLFRYSRFFHSDQPLNLNHKNSLLRSGTSLCAPISKYFGSIPGCRKAFQASAINYLRMPSGFQFRRFTSLSSGVQRNPSFSRLNSDDI
        M+  TMRKKS  FLF YSR FHS QPLNL+H NSLLRSGTS C PIS+YFGSI  CRKAFQASAIN+ ++PSGF+FR  TSLSS VQRNPSFSRLNSDDI
Subjt:  MITTTMRKKSASFLFRYSRFFHSDQPLNLNHKNSLLRSGTSLCAPISKYFGSIPGCRKAFQASAINYLRMPSGFQFRRFTSLSSGVQRNPSFSRLNSDDI

Query:  DFFRSILGEKNVVQDEDRLLDANTDWLRKYRGSSKLLLQPRSTEEVAHVL
        +FFRSILGEKNVVQDEDRLLDANTDWLRKYRGSSKLLLQPRSTEEV+ +L
Subjt:  DFFRSILGEKNVVQDEDRLLDANTDWLRKYRGSSKLLLQPRSTEEVAHVL

XP_016901179.1 PREDICTED: D-2-hydroxyglutarate dehydrogenase, mitochondrial isoform X2 [Cucumis melo]1.1e-6182Show/hide
Query:  MITTTMRKKSASFLFRYSRFFHSDQPLNLNHKNSLLRSGTSLCAPISKYFGSIPGCRKAFQASAINYLRMPSGFQFRRFTSLSSGVQRNPSFSRLNSDDI
        M+  TMRKKS  FLF YSR FHS QPLNL+H NSLLRSGTS C PIS+YFGSI  CRKAFQASAIN+ ++PSGF+FR  TSLSS VQRNPSFSRLNSDDI
Subjt:  MITTTMRKKSASFLFRYSRFFHSDQPLNLNHKNSLLRSGTSLCAPISKYFGSIPGCRKAFQASAINYLRMPSGFQFRRFTSLSSGVQRNPSFSRLNSDDI

Query:  DFFRSILGEKNVVQDEDRLLDANTDWLRKYRGSSKLLLQPRSTEEVAHVL
        +FFRSILGEKNVVQDEDRLLDANTDWLRKYRGSSKLLLQPRSTEEV+ +L
Subjt:  DFFRSILGEKNVVQDEDRLLDANTDWLRKYRGSSKLLLQPRSTEEVAHVL

XP_038896937.1 D-2-hydroxyglutarate dehydrogenase, mitochondrial isoform X1 [Benincasa hispida]2.8e-6888.67Show/hide
Query:  MITTTMRKKSASFLFRYSRFFHSDQPLNLNHKNSLLRSGTSLCAPISKYFGSIPGCRKAFQASAINYLRMPSGFQFRRFTSLSSGVQRNPSFSRLNSDDI
        M+TTTMRKKSASFLFRYSR FHSDQPL+LNH NSLLRSGTSLC PIS+Y GS  GCRKAFQASAIN+ RMP GFQFRRFTSLSS VQRNPSFSRLNSDDI
Subjt:  MITTTMRKKSASFLFRYSRFFHSDQPLNLNHKNSLLRSGTSLCAPISKYFGSIPGCRKAFQASAINYLRMPSGFQFRRFTSLSSGVQRNPSFSRLNSDDI

Query:  DFFRSILGEKNVVQDEDRLLDANTDWLRKYRGSSKLLLQPRSTEEVAHVL
        DFFRSILGEKNVVQDEDRLLDANTDWLRKYRG+SKLLLQPRSTEEV+ +L
Subjt:  DFFRSILGEKNVVQDEDRLLDANTDWLRKYRGSSKLLLQPRSTEEVAHVL

XP_038896946.1 D-2-hydroxyglutarate dehydrogenase, mitochondrial isoform X2 [Benincasa hispida]2.8e-6888.67Show/hide
Query:  MITTTMRKKSASFLFRYSRFFHSDQPLNLNHKNSLLRSGTSLCAPISKYFGSIPGCRKAFQASAINYLRMPSGFQFRRFTSLSSGVQRNPSFSRLNSDDI
        M+TTTMRKKSASFLFRYSR FHSDQPL+LNH NSLLRSGTSLC PIS+Y GS  GCRKAFQASAIN+ RMP GFQFRRFTSLSS VQRNPSFSRLNSDDI
Subjt:  MITTTMRKKSASFLFRYSRFFHSDQPLNLNHKNSLLRSGTSLCAPISKYFGSIPGCRKAFQASAINYLRMPSGFQFRRFTSLSSGVQRNPSFSRLNSDDI

Query:  DFFRSILGEKNVVQDEDRLLDANTDWLRKYRGSSKLLLQPRSTEEVAHVL
        DFFRSILGEKNVVQDEDRLLDANTDWLRKYRG+SKLLLQPRSTEEV+ +L
Subjt:  DFFRSILGEKNVVQDEDRLLDANTDWLRKYRGSSKLLLQPRSTEEVAHVL

TrEMBL top hitse value%identityAlignment
A0A1S3BTX7 D-2-hydroxyglutarate dehydrogenase, mitochondrial isoform X15.5e-6282Show/hide
Query:  MITTTMRKKSASFLFRYSRFFHSDQPLNLNHKNSLLRSGTSLCAPISKYFGSIPGCRKAFQASAINYLRMPSGFQFRRFTSLSSGVQRNPSFSRLNSDDI
        M+  TMRKKS  FLF YSR FHS QPLNL+H NSLLRSGTS C PIS+YFGSI  CRKAFQASAIN+ ++PSGF+FR  TSLSS VQRNPSFSRLNSDDI
Subjt:  MITTTMRKKSASFLFRYSRFFHSDQPLNLNHKNSLLRSGTSLCAPISKYFGSIPGCRKAFQASAINYLRMPSGFQFRRFTSLSSGVQRNPSFSRLNSDDI

Query:  DFFRSILGEKNVVQDEDRLLDANTDWLRKYRGSSKLLLQPRSTEEVAHVL
        +FFRSILGEKNVVQDEDRLLDANTDWLRKYRGSSKLLLQPRSTEEV+ +L
Subjt:  DFFRSILGEKNVVQDEDRLLDANTDWLRKYRGSSKLLLQPRSTEEVAHVL

A0A1S3BU90 D-2-hydroxyglutarate dehydrogenase, mitochondrial isoform X35.5e-6282Show/hide
Query:  MITTTMRKKSASFLFRYSRFFHSDQPLNLNHKNSLLRSGTSLCAPISKYFGSIPGCRKAFQASAINYLRMPSGFQFRRFTSLSSGVQRNPSFSRLNSDDI
        M+  TMRKKS  FLF YSR FHS QPLNL+H NSLLRSGTS C PIS+YFGSI  CRKAFQASAIN+ ++PSGF+FR  TSLSS VQRNPSFSRLNSDDI
Subjt:  MITTTMRKKSASFLFRYSRFFHSDQPLNLNHKNSLLRSGTSLCAPISKYFGSIPGCRKAFQASAINYLRMPSGFQFRRFTSLSSGVQRNPSFSRLNSDDI

Query:  DFFRSILGEKNVVQDEDRLLDANTDWLRKYRGSSKLLLQPRSTEEVAHVL
        +FFRSILGEKNVVQDEDRLLDANTDWLRKYRGSSKLLLQPRSTEEV+ +L
Subjt:  DFFRSILGEKNVVQDEDRLLDANTDWLRKYRGSSKLLLQPRSTEEVAHVL

A0A1S4DYX4 D-2-hydroxyglutarate dehydrogenase, mitochondrial isoform X25.5e-6282Show/hide
Query:  MITTTMRKKSASFLFRYSRFFHSDQPLNLNHKNSLLRSGTSLCAPISKYFGSIPGCRKAFQASAINYLRMPSGFQFRRFTSLSSGVQRNPSFSRLNSDDI
        M+  TMRKKS  FLF YSR FHS QPLNL+H NSLLRSGTS C PIS+YFGSI  CRKAFQASAIN+ ++PSGF+FR  TSLSS VQRNPSFSRLNSDDI
Subjt:  MITTTMRKKSASFLFRYSRFFHSDQPLNLNHKNSLLRSGTSLCAPISKYFGSIPGCRKAFQASAINYLRMPSGFQFRRFTSLSSGVQRNPSFSRLNSDDI

Query:  DFFRSILGEKNVVQDEDRLLDANTDWLRKYRGSSKLLLQPRSTEEVAHVL
        +FFRSILGEKNVVQDEDRLLDANTDWLRKYRGSSKLLLQPRSTEEV+ +L
Subjt:  DFFRSILGEKNVVQDEDRLLDANTDWLRKYRGSSKLLLQPRSTEEVAHVL

A0A6J1C4I6 D-2-hydroxyglutarate dehydrogenase, mitochondrial isoform X38.6e-5571.07Show/hide
Query:  MITTTMRKKSASFLFRYSRFFHSDQPLNLNHKNSLLRSGTSLCA---------PISKYFGSIPGCRKAFQASAINYLRMPSGFQFRRFTSLSSGVQRNPS
        M+TT M+ K+ ++ FRYSRFFHSDQ  NLN+KNSLL SG   C+         P S + GSI GCR A  ASA+++ R+  GFQFRRFTSLSS VQRNPS
Subjt:  MITTTMRKKSASFLFRYSRFFHSDQPLNLNHKNSLLRSGTSLCA---------PISKYFGSIPGCRKAFQASAINYLRMPSGFQFRRFTSLSSGVQRNPS

Query:  FSRLNSDDIDFFRSILGEKNVVQDEDRLLDANTDWLRKYRGSSKLLLQPRSTEEVAHVL
        FSRLNSDDIDFFRSILGEKNVVQDEDRLLDANTDW+RKYRGSSKLLLQPRSTEEV+ +L
Subjt:  FSRLNSDDIDFFRSILGEKNVVQDEDRLLDANTDWLRKYRGSSKLLLQPRSTEEVAHVL

A0A6J1J7W7 D-2-hydroxyglutarate dehydrogenase, mitochondrial1.0e-5574.84Show/hide
Query:  MITTTMRKKSASFLFRYSRFFHSDQPLNLNHKNSLLRSGTSLC---------APISKYFGSIPGCRKAFQASAINYLRMPSGFQFRRFTSLSSGVQRNPS
        M TTTM++K+AS+LFRYSR FHSDQ LNLNH NS L SGT LC          PIS+Y      CR A+ ASAIN+ RM SGFQFRRF SLSS VQRNPS
Subjt:  MITTTMRKKSASFLFRYSRFFHSDQPLNLNHKNSLLRSGTSLC---------APISKYFGSIPGCRKAFQASAINYLRMPSGFQFRRFTSLSSGVQRNPS

Query:  FSRLNSDDIDFFRSILGEKNVVQDEDRLLDANTDWLRKYRGSSKLLLQPRSTEEVAHVL
        FSRLNSDDIDFFRSILGEKNV+QDEDRLLDANTDWLRKYRGSSKLLLQPRSTEEV+ +L
Subjt:  FSRLNSDDIDFFRSILGEKNVVQDEDRLLDANTDWLRKYRGSSKLLLQPRSTEEVAHVL

SwissProt top hitse value%identityAlignment
B8B7X6 Probable D-2-hydroxyglutarate dehydrogenase, mitochondrial1.9e-1957.32Show/hide
Query:  RMPSGFQFRRFTSLSSGVQRNPSFSRLNSDDIDFFRSILGEKNVVQDEDRLLDANTDWLRKYRGSSKLLLQPRSTEEVAHVL
        RM    Q R F+S ++ VQRNP++S LNSDD+ +F+SILG+  VVQDEDR+  AN DW+ KY+GSS+LLL P+ST EV+ +L
Subjt:  RMPSGFQFRRFTSLSSGVQRNPSFSRLNSDDIDFFRSILGEKNVVQDEDRLLDANTDWLRKYRGSSKLLLQPRSTEEVAHVL

O23240 D-2-hydroxyglutarate dehydrogenase, mitochondrial2.8e-1855.84Show/hide
Query:  QFRRF-TSLSSGVQRNPSFSRLNSDDIDFFRSILGEKNVVQDEDRLLDANTDWLRKYRGSSKLLLQPRSTEEVAHVL
        Q++ F +S +S +QRNP FS L+S D+ +F+ ILGEKNVV+D++RL  ANTDW+ KY+GSSKL+L P++T+EV+ +L
Subjt:  QFRRF-TSLSSGVQRNPSFSRLNSDDIDFFRSILGEKNVVQDEDRLLDANTDWLRKYRGSSKLLLQPRSTEEVAHVL

P39976 D-2-hydroxyglutarate--pyruvate transhydrogenase DLD31.4e-0943.28Show/hide
Query:  VQRNPSFSRLNSDDIDFFRSILGEKNVV--QDEDRLLDANTDWLRKYRGSSKLLLQPRSTEEVAHVL
        V+RNP+F  L+S+D+ +FRSIL    ++  Q  + L   N DW++KYRG S L+L P ST++V+ ++
Subjt:  VQRNPSFSRLNSDDIDFFRSILGEKNVV--QDEDRLLDANTDWLRKYRGSSKLLLQPRSTEEVAHVL

P46681 D-2-hydroxyglutarate--pyruvate transhydrogenase DLD27.3e-1136.84Show/hide
Query:  ASAINYLRMPSGFQFRRFTSLSS----GVQRNPSFSRLNSDDIDFFRSILGEKNVVQ--DEDRLLDANTDWLRKYRGSSKLLLQPRSTEEVAHVL
        ++ + Y R  + +  +  T L+S     V R+P F +L SDD+++F+SIL E+ +++  + + L   N DW+RKY+G SKL+L+P+S E+V+ +L
Subjt:  ASAINYLRMPSGFQFRRFTSLSS----GVQRNPSFSRLNSDDIDFFRSILGEKNVVQ--DEDRLLDANTDWLRKYRGSSKLLLQPRSTEEVAHVL

Q7XI14 Probable D-2-hydroxyglutarate dehydrogenase, mitochondrial1.9e-1957.32Show/hide
Query:  RMPSGFQFRRFTSLSSGVQRNPSFSRLNSDDIDFFRSILGEKNVVQDEDRLLDANTDWLRKYRGSSKLLLQPRSTEEVAHVL
        RM    Q R F+S ++ VQRNP++S LNSDD+ +F+SILG+  VVQDEDR+  AN DW+ KY+GSS+LLL P+ST EV+ +L
Subjt:  RMPSGFQFRRFTSLSSGVQRNPSFSRLNSDDIDFFRSILGEKNVVQDEDRLLDANTDWLRKYRGSSKLLLQPRSTEEVAHVL

Arabidopsis top hitse value%identityAlignment
AT4G36400.1 FAD-linked oxidases family protein2.0e-1955.84Show/hide
Query:  QFRRF-TSLSSGVQRNPSFSRLNSDDIDFFRSILGEKNVVQDEDRLLDANTDWLRKYRGSSKLLLQPRSTEEVAHVL
        Q++ F +S +S +QRNP FS L+S D+ +F+ ILGEKNVV+D++RL  ANTDW+ KY+GSSKL+L P++T+EV+ +L
Subjt:  QFRRF-TSLSSGVQRNPSFSRLNSDDIDFFRSILGEKNVVQDEDRLLDANTDWLRKYRGSSKLLLQPRSTEEVAHVL

AT4G36400.2 FAD-linked oxidases family protein2.0e-1955.84Show/hide
Query:  QFRRF-TSLSSGVQRNPSFSRLNSDDIDFFRSILGEKNVVQDEDRLLDANTDWLRKYRGSSKLLLQPRSTEEVAHVL
        Q++ F +S +S +QRNP FS L+S D+ +F+ ILGEKNVV+D++RL  ANTDW+ KY+GSSKL+L P++T+EV+ +L
Subjt:  QFRRF-TSLSSGVQRNPSFSRLNSDDIDFFRSILGEKNVVQDEDRLLDANTDWLRKYRGSSKLLLQPRSTEEVAHVL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATCACGACGACGATGAGGAAGAAATCTGCCAGTTTTCTCTTCAGATACTCTCGATTTTTTCACTCGGATCAGCCTTTGAATCTTAATCATAAGAATTCGCTTCTCCG
TTCAGGAACTTCCTTGTGCGCGCCAATTTCAAAATATTTTGGTTCCATTCCGGGATGCAGAAAAGCTTTTCAGGCTTCTGCGATCAATTATTTGAGAATGCCTTCCGGAT
TTCAGTTCAGACGCTTTACTTCATTATCTTCGGGGGTTCAGAGAAATCCTTCATTTTCGAGGTTAAATTCTGATGATATCGACTTTTTCCGGAGTATTTTGGGGGAGAAA
AATGTAGTTCAGGATGAGGATAGGCTTTTGGATGCAAATACAGATTGGTTGCGGAAGTACAGAGGGTCGAGTAAGCTTTTACTACAACCTAGGAGCACAGAAGAGGTAGC
TCATGTCCTGCCTGACTCTGGCTCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGATCACGACGACGATGAGGAAGAAATCTGCCAGTTTTCTCTTCAGATACTCTCGATTTTTTCACTCGGATCAGCCTTTGAATCTTAATCATAAGAATTCGCTTCTCCG
TTCAGGAACTTCCTTGTGCGCGCCAATTTCAAAATATTTTGGTTCCATTCCGGGATGCAGAAAAGCTTTTCAGGCTTCTGCGATCAATTATTTGAGAATGCCTTCCGGAT
TTCAGTTCAGACGCTTTACTTCATTATCTTCGGGGGTTCAGAGAAATCCTTCATTTTCGAGGTTAAATTCTGATGATATCGACTTTTTCCGGAGTATTTTGGGGGAGAAA
AATGTAGTTCAGGATGAGGATAGGCTTTTGGATGCAAATACAGATTGGTTGCGGAAGTACAGAGGGTCGAGTAAGCTTTTACTACAACCTAGGAGCACAGAAGAGGTAGC
TCATGTCCTGCCTGACTCTGGCTCTTGA
Protein sequenceShow/hide protein sequence
MITTTMRKKSASFLFRYSRFFHSDQPLNLNHKNSLLRSGTSLCAPISKYFGSIPGCRKAFQASAINYLRMPSGFQFRRFTSLSSGVQRNPSFSRLNSDDIDFFRSILGEK
NVVQDEDRLLDANTDWLRKYRGSSKLLLQPRSTEEVAHVLPDSGS