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HG10002000 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10002000
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionGlycos_transf_1 domain-containing protein
Genome locationChr11:2515174..2515551
RNA-Seq ExpressionHG10002000
SyntenyHG10002000
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
GO:0016757 - transferase activity, transferring glycosyl groups (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAB5556834.1 hypothetical protein DKX38_007743 [Salix brachista]2.3e-0475Show/hide
Query:  MSKMTLVIVCVCSGGVLSSIGFIFGFGFVAKYLIAVQNIL
        MS + LVIV VCSGGVLSSIGFIFG GFV KYLIA  N++
Subjt:  MSKMTLVIVCVCSGGVLSSIGFIFGFGFVAKYLIAVQNIL
KAF9682247.1 hypothetical protein SADUNF_Sadunf05G0089000 [Salix dunnii]6.7e-0472.5Show/hide
Query:  MSKMTLVIVCVCSGGVLSSIGFIFGFGFVAKYLIAVQNIL
        MS + LVIV VCSGGV SSIGFIFG GFV KYLIA  N++
Subjt:  MSKMTLVIVCVCSGGVLSSIGFIFGFGFVAKYLIAVQNIL
TrEMBL top hitse value%identityAlignment
A0A5N5MP09 Glycos_transf_1 domain-containing protein1.1e-0475Show/hide
Query:  MSKMTLVIVCVCSGGVLSSIGFIFGFGFVAKYLIAVQNIL
        MS + LVIV VCSGGVLSSIGFIFG GFV KYLIA  N++
Subjt:  MSKMTLVIVCVCSGGVLSSIGFIFGFGFVAKYLIAVQNIL
A0A6N2N3L7 Glycos_transf_1 domain-containing protein1.1e-0475Show/hide
Query:  MSKMTLVIVCVCSGGVLSSIGFIFGFGFVAKYLIAVQNIL
        MS + LVIV VCSGGVLSSIGFIFG GFV KYLIA  N++
Subjt:  MSKMTLVIVCVCSGGVLSSIGFIFGFGFVAKYLIAVQNIL
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCGAAGATGACTCTAGTGATCGTCTGCGTTTGCTCCGGTGGTGTTTTAAGCTCAATCGGCTTCATCTTCGGCTTTGGCTTCGTCGCAAAATACCTTATTGCAGTCCA
AAACATACTGATTGTATTACTTACACAACCAGACGGAGCCGACAACCCCAGTAATCCTGACCTAAGCTCCGTTCTCAGAAAATTATATCGACGTGATAACCGTCGGTCTG
TGATTCAGGGGAATGGTCACTGGCGGGGAACTCCGGCGACTATAGCTGGATTTCGAGAATTTCAAACGGAGTGTGGACGGGCGAATTTCGGGGTTTTATATATTTTGGGC
CGGAGAAAATTGCATAGCTGGACTATTTTGGAGGCCCAGAAAGAATAA
mRNA sequenceShow/hide mRNA sequence
ATGTCGAAGATGACTCTAGTGATCGTCTGCGTTTGCTCCGGTGGTGTTTTAAGCTCAATCGGCTTCATCTTCGGCTTTGGCTTCGTCGCAAAATACCTTATTGCAGTCCA
AAACATACTGATTGTATTACTTACACAACCAGACGGAGCCGACAACCCCAGTAATCCTGACCTAAGCTCCGTTCTCAGAAAATTATATCGACGTGATAACCGTCGGTCTG
TGATTCAGGGGAATGGTCACTGGCGGGGAACTCCGGCGACTATAGCTGGATTTCGAGAATTTCAAACGGAGTGTGGACGGGCGAATTTCGGGGTTTTATATATTTTGGGC
CGGAGAAAATTGCATAGCTGGACTATTTTGGAGGCCCAGAAAGAATAA
Protein sequenceShow/hide protein sequence
MSKMTLVIVCVCSGGVLSSIGFIFGFGFVAKYLIAVQNILIVLLTQPDGADNPSNPDLSSVLRKLYRRDNRRSVIQGNGHWRGTPATIAGFREFQTECGRANFGVLYILG
RRKLHSWTILEAQKE