CuGenDBv2

Gene ID	HG10002010
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	Unknown protein
Genome location	Chr11:2584580..2585302
RNA-Seq Expression	HG10002010
Synteny	HG10002010
Gene Ontology terms	GO:0032259 - methylation (biological process) GO:0016021 - integral component of membrane (cellular component) GO:0008168 - methyltransferase activity (molecular function)
InterPro domains	NA

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAA0044789.1 putative TRNA--methyltransferase non-catalytic subunit trm6MTase subunit trm6 [Cucumis melo var. makuwa]

4.3e-92

77.73

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Query:  MDLFFFDKAEKISSPLPRCNLLHIFAKFFRFLELCFLLIFLSWTLSRLPIALRISGEYLGKLFGFIATPLFGFLLCNAIIVALVAKPSQFSGRRTA-ETD
        MD FFFDKAEK+S+P+PRCNLL IF+KFFR LEL FLL+ LSW  SRLPIALRIS +Y  KLF FIATPLFGFLLCNAIIVALVAKPSQFS   T+ +TD
Subjt:  MDLFFFDKAEKISSPLPRCNLLHIFAKFFRFLELCFLLIFLSWTLSRLPIALRISGEYLGKLFGFIATPLFGFLLCNAIIVALVAKPSQFSGRRTA-ETD

Query:  RIYQDLIEKTGS-RDLTDSPSEDV-EIVYQDKQMIAEG----IHSIDREIQVKNTDLESESELGHPKLILRTLSEKLNRECVKEQSQKLRRSETEKCRNL
        RIY+DLIE TG+  DLTDS SE+V EIVYQDK++IAEG     +S D EI++KNTDLES+S L H K+ILR+LSEKLNRECVK QS+KLRRSETEKCRNL
Subjt:  RIYQDLIEKTGS-RDLTDSPSEDV-EIVYQDKQMIAEG----IHSIDREIQVKNTDLESESELGHPKLILRTLSEKLNRECVKEQSQKLRRSETEKCRNL

Query:  EHSHEILYCQDDLSSEEFQRKIEAFIAKEKKFRREESSAIVVLHCDG
        E+S++ILY QDDLSSEEFQRKIEAFIAKEKKFRREESSAIVVLHCDG
Subjt:  EHSHEILYCQDDLSSEEFQRKIEAFIAKEKKFRREESSAIVVLHCDG

XP_008452094.1 PREDICTED: uncharacterized protein LOC103493205 [Cucumis melo]

2.7e-94

78.95

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Query:  MDLFFFDKAEKISSPLPRCNLLHIFAKFFRFLELCFLLIFLSWTLSRLPIALRISGEYLGKLFGFIATPLFGFLLCNAIIVALVAKPSQFSGRRTA-ETD
        MD FFFDKAEK+S+P+PRCNLL IF+KFFRFLEL FLL+ LSW  SRLPIALRIS +Y  KLF FIATPLFGFLLCNAIIVALVAKPSQFS   T+ +TD
Subjt:  MDLFFFDKAEKISSPLPRCNLLHIFAKFFRFLELCFLLIFLSWTLSRLPIALRISGEYLGKLFGFIATPLFGFLLCNAIIVALVAKPSQFSGRRTA-ETD

Query:  RIYQDLIEKTGS-RDLTDSPSEDV-EIVYQDKQMIAEG----IHSIDREIQVKNTDLESESELGHPKLILRTLSEKLNRECVKEQSQKLRRSETEKCRNL
        RIY+DLIEKTG+  DLTDS SE+V EIVYQDK++IAEG     +S D EI++KNTDLES+S LGH K+ILR+LSEKLNRECVK QS+KLRRSETEKCRNL
Subjt:  RIYQDLIEKTGS-RDLTDSPSEDV-EIVYQDKQMIAEG----IHSIDREIQVKNTDLESESELGHPKLILRTLSEKLNRECVKEQSQKLRRSETEKCRNL

Query:  EHSHEILYCQDDLSSEEFQRKIEAFIAKEKKFRREESSAIVVLHCDG
        E+S++ILY QDDLSSEEFQRKIEAFIAKEKKFRREESSAIVVLHCDG
Subjt:  EHSHEILYCQDDLSSEEFQRKIEAFIAKEKKFRREESSAIVVLHCDG

XP_011653156.1 uncharacterized protein LOC105435182 [Cucumis sativus]

1.5e-92

78.86

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Query:  MDLFFFDKAEKISSPLPRCNLLHIFAKFFRFLELCFLLIFLSWTLSRLPIALRISGEYLGKLFGFIATPLFGFLLCNAIIVALVAKPSQFSGRRTAETDR
        MD FFFDKAEK+S+P+PRCNLL IF+KFFRFLEL FLL+ LSW  SRLPIALRIS EY  KLF FIATPLFGFLLCNAIIVALVAKPSQFS R T+ET R
Subjt:  MDLFFFDKAEKISSPLPRCNLLHIFAKFFRFLELCFLLIFLSWTLSRLPIALRISGEYLGKLFGFIATPLFGFLLCNAIIVALVAKPSQFSGRRTAETDR

Query:  IYQDLIEKTGS-RDLTDSPSEDV-EIVYQDKQMIAEG----IHSIDREIQVKNTDLESESELGHPKLILRTLSEKLNRECVKEQSQKLRRSETEKCRNLE
        IY+DLI+KTG+  DLTDS SE+V EIVYQDKQ+IAEG     +S D EI+VKNTDLESES LG  K+ILR+LSEKLNRECVK +S+KLRRSETEKC NLE
Subjt:  IYQDLIEKTGS-RDLTDSPSEDV-EIVYQDKQMIAEG----IHSIDREIQVKNTDLESESELGHPKLILRTLSEKLNRECVKEQSQKLRRSETEKCRNLE

Query:  HSHEILYCQDDLSSEEFQRKIEAFIAKEKKFRREESSAIVVLHCDG
         +++IL  QDDLSSEEFQRKIEAFIAKEKKFRREESSAIVVLHCDG
Subjt:  HSHEILYCQDDLSSEEFQRKIEAFIAKEKKFRREESSAIVVLHCDG

XP_022136879.1 uncharacterized protein LOC111008461, partial [Momordica charantia]

1.1e-87

73.28

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Query:  MDLFFFDKAEKISSPLPR--CNLLHIFAKFFRFLELCFLLIFLSWTLSRLPIALRISGEYLGKLFGFIATPLFGFLLCNAIIVALVAKPSQFSGRRTA--
        MD FFFDKAEK  + +PR  CNLL IFAK FRFLELC LL+FLSW LSRLP A+RISGEY  KLF F+A+PLFGF+LCNAIIVALVAKPSQ SGRR A  
Subjt:  MDLFFFDKAEKISSPLPR--CNLLHIFAKFFRFLELCFLLIFLSWTLSRLPIALRISGEYLGKLFGFIATPLFGFLLCNAIIVALVAKPSQFSGRRTA--

Query:  ---ETDRIYQDLIEKTGSRDLTDSPSEDVEIVYQDKQMIAEGIHSIDREIQVKNTDLESESELGHPKLILRTLSEKLNRECVKEQSQKLRRSETEKCRN-
           ETDR+Y+DLI K+G+ DL +SPSED EIV+QDK++IAE I+SIDR+++VK+TD E+ES + HPK+I RTLSEK+ REC K QS+KLRRSETEKCRN 
Subjt:  ---ETDRIYQDLIEKTGSRDLTDSPSEDVEIVYQDKQMIAEGIHSIDREIQVKNTDLESESELGHPKLILRTLSEKLNRECVKEQSQKLRRSETEKCRN-

Query:  LEHSHEILYCQDDLSSEEFQRKIEAFIAKEKKFRREESSAIVVLHCD
        LE SH+I+Y QDDLSSEEFQRKIEAFIA+EKKFRREESSAI VLH D
Subjt:  LEHSHEILYCQDDLSSEEFQRKIEAFIAKEKKFRREESSAIVVLHCD

XP_038888396.1 uncharacterized protein LOC120078241 [Benincasa hispida]

1.0e-101

80.97

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Query:  MDLFFFDKAEKISSPLPRCNLLHIFAKFFRFLELCFLLIFLSWTLSRLPIALRISGEYLGKLFGFIATPLFGFLLCNAIIVALVAKPSQF-------SGR
        MD FFFDKAEK+S+P+PRCNLL IFAKFFRFLEL FLL+FLSW LSRLPIAL +S EY GKLF F+ATPLFGFLLCNAIIVALVAKP+QF       S  
Subjt:  MDLFFFDKAEKISSPLPRCNLLHIFAKFFRFLELCFLLIFLSWTLSRLPIALRISGEYLGKLFGFIATPLFGFLLCNAIIVALVAKPSQF-------SGR

Query:  RTAETDRIYQDLIEKTGSRDLTDSPSEDVEIVYQDKQMIAEGIHSIDREIQVKNTDLESESELGHPKLILRTLSEKLNRECVKEQSQKLRRSETEKCRNL
         +AE DRIY+DLIEKTGS DLTDS SE+VEIVYQDKQ+IAEGI+SIDREI+VKNTDLE+ES LGH K++LRTLSEKLNRECV  + +KLRRSETEKCRNL
Subjt:  RTAETDRIYQDLIEKTGSRDLTDSPSEDVEIVYQDKQMIAEGIHSIDREIQVKNTDLESESELGHPKLILRTLSEKLNRECVKEQSQKLRRSETEKCRNL

Query:  EHSHEILYCQDDLSSEEFQRKIEAFIAKEKKFRREESSAIVVLHCDG
        EHS++ILY QDDLSSEEFQRKIEAFIAKEKKFRREESSAIVVLHCDG
Subjt:  EHSHEILYCQDDLSSEEFQRKIEAFIAKEKKFRREESSAIVVLHCDG

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KY10 Uncharacterized protein

7.2e-93

78.86

Show/hide

Query:  MDLFFFDKAEKISSPLPRCNLLHIFAKFFRFLELCFLLIFLSWTLSRLPIALRISGEYLGKLFGFIATPLFGFLLCNAIIVALVAKPSQFSGRRTAETDR
        MD FFFDKAEK+S+P+PRCNLL IF+KFFRFLEL FLL+ LSW  SRLPIALRIS EY  KLF FIATPLFGFLLCNAIIVALVAKPSQFS R T+ET R
Subjt:  MDLFFFDKAEKISSPLPRCNLLHIFAKFFRFLELCFLLIFLSWTLSRLPIALRISGEYLGKLFGFIATPLFGFLLCNAIIVALVAKPSQFSGRRTAETDR

Query:  IYQDLIEKTGS-RDLTDSPSEDV-EIVYQDKQMIAEG----IHSIDREIQVKNTDLESESELGHPKLILRTLSEKLNRECVKEQSQKLRRSETEKCRNLE
        IY+DLI+KTG+  DLTDS SE+V EIVYQDKQ+IAEG     +S D EI+VKNTDLESES LG  K+ILR+LSEKLNRECVK +S+KLRRSETEKC NLE
Subjt:  IYQDLIEKTGS-RDLTDSPSEDV-EIVYQDKQMIAEG----IHSIDREIQVKNTDLESESELGHPKLILRTLSEKLNRECVKEQSQKLRRSETEKCRNLE

Query:  HSHEILYCQDDLSSEEFQRKIEAFIAKEKKFRREESSAIVVLHCDG
         +++IL  QDDLSSEEFQRKIEAFIAKEKKFRREESSAIVVLHCDG
Subjt:  HSHEILYCQDDLSSEEFQRKIEAFIAKEKKFRREESSAIVVLHCDG

A0A1S3BT40 uncharacterized protein LOC103493205

1.3e-94

78.95

Show/hide

Query:  MDLFFFDKAEKISSPLPRCNLLHIFAKFFRFLELCFLLIFLSWTLSRLPIALRISGEYLGKLFGFIATPLFGFLLCNAIIVALVAKPSQFSGRRTA-ETD
        MD FFFDKAEK+S+P+PRCNLL IF+KFFRFLEL FLL+ LSW  SRLPIALRIS +Y  KLF FIATPLFGFLLCNAIIVALVAKPSQFS   T+ +TD
Subjt:  MDLFFFDKAEKISSPLPRCNLLHIFAKFFRFLELCFLLIFLSWTLSRLPIALRISGEYLGKLFGFIATPLFGFLLCNAIIVALVAKPSQFSGRRTA-ETD

Query:  RIYQDLIEKTGS-RDLTDSPSEDV-EIVYQDKQMIAEG----IHSIDREIQVKNTDLESESELGHPKLILRTLSEKLNRECVKEQSQKLRRSETEKCRNL
        RIY+DLIEKTG+  DLTDS SE+V EIVYQDK++IAEG     +S D EI++KNTDLES+S LGH K+ILR+LSEKLNRECVK QS+KLRRSETEKCRNL
Subjt:  RIYQDLIEKTGS-RDLTDSPSEDV-EIVYQDKQMIAEG----IHSIDREIQVKNTDLESESELGHPKLILRTLSEKLNRECVKEQSQKLRRSETEKCRNL

Query:  EHSHEILYCQDDLSSEEFQRKIEAFIAKEKKFRREESSAIVVLHCDG
        E+S++ILY QDDLSSEEFQRKIEAFIAKEKKFRREESSAIVVLHCDG
Subjt:  EHSHEILYCQDDLSSEEFQRKIEAFIAKEKKFRREESSAIVVLHCDG

A0A5A7TU70 Putative TRNA--methyltransferase non-catalytic subunit trm6MTase subunit trm6

2.1e-92

77.73

Show/hide

Query:  MDLFFFDKAEKISSPLPRCNLLHIFAKFFRFLELCFLLIFLSWTLSRLPIALRISGEYLGKLFGFIATPLFGFLLCNAIIVALVAKPSQFSGRRTA-ETD
        MD FFFDKAEK+S+P+PRCNLL IF+KFFR LEL FLL+ LSW  SRLPIALRIS +Y  KLF FIATPLFGFLLCNAIIVALVAKPSQFS   T+ +TD
Subjt:  MDLFFFDKAEKISSPLPRCNLLHIFAKFFRFLELCFLLIFLSWTLSRLPIALRISGEYLGKLFGFIATPLFGFLLCNAIIVALVAKPSQFSGRRTA-ETD

Query:  RIYQDLIEKTGS-RDLTDSPSEDV-EIVYQDKQMIAEG----IHSIDREIQVKNTDLESESELGHPKLILRTLSEKLNRECVKEQSQKLRRSETEKCRNL
        RIY+DLIE TG+  DLTDS SE+V EIVYQDK++IAEG     +S D EI++KNTDLES+S L H K+ILR+LSEKLNRECVK QS+KLRRSETEKCRNL
Subjt:  RIYQDLIEKTGS-RDLTDSPSEDV-EIVYQDKQMIAEG----IHSIDREIQVKNTDLESESELGHPKLILRTLSEKLNRECVKEQSQKLRRSETEKCRNL

Query:  EHSHEILYCQDDLSSEEFQRKIEAFIAKEKKFRREESSAIVVLHCDG
        E+S++ILY QDDLSSEEFQRKIEAFIAKEKKFRREESSAIVVLHCDG
Subjt:  EHSHEILYCQDDLSSEEFQRKIEAFIAKEKKFRREESSAIVVLHCDG

A0A5D3CYU3 Putative TRNA--methyltransferase non-catalytic subunit trm6MTase subunit trm6

1.3e-94

78.95

Show/hide

Query:  MDLFFFDKAEKISSPLPRCNLLHIFAKFFRFLELCFLLIFLSWTLSRLPIALRISGEYLGKLFGFIATPLFGFLLCNAIIVALVAKPSQFSGRRTA-ETD
        MD FFFDKAEK+S+P+PRCNLL IF+KFFRFLEL FLL+ LSW  SRLPIALRIS +Y  KLF FIATPLFGFLLCNAIIVALVAKPSQFS   T+ +TD
Subjt:  MDLFFFDKAEKISSPLPRCNLLHIFAKFFRFLELCFLLIFLSWTLSRLPIALRISGEYLGKLFGFIATPLFGFLLCNAIIVALVAKPSQFSGRRTA-ETD

Query:  RIYQDLIEKTGS-RDLTDSPSEDV-EIVYQDKQMIAEG----IHSIDREIQVKNTDLESESELGHPKLILRTLSEKLNRECVKEQSQKLRRSETEKCRNL
        RIY+DLIEKTG+  DLTDS SE+V EIVYQDK++IAEG     +S D EI++KNTDLES+S LGH K+ILR+LSEKLNRECVK QS+KLRRSETEKCRNL
Subjt:  RIYQDLIEKTGS-RDLTDSPSEDV-EIVYQDKQMIAEG----IHSIDREIQVKNTDLESESELGHPKLILRTLSEKLNRECVKEQSQKLRRSETEKCRNL

Query:  EHSHEILYCQDDLSSEEFQRKIEAFIAKEKKFRREESSAIVVLHCDG
        E+S++ILY QDDLSSEEFQRKIEAFIAKEKKFRREESSAIVVLHCDG
Subjt:  EHSHEILYCQDDLSSEEFQRKIEAFIAKEKKFRREESSAIVVLHCDG

A0A6J1C5K3 uncharacterized protein LOC111008461

5.3e-88

73.28

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Query:  MDLFFFDKAEKISSPLPR--CNLLHIFAKFFRFLELCFLLIFLSWTLSRLPIALRISGEYLGKLFGFIATPLFGFLLCNAIIVALVAKPSQFSGRRTA--
        MD FFFDKAEK  + +PR  CNLL IFAK FRFLELC LL+FLSW LSRLP A+RISGEY  KLF F+A+PLFGF+LCNAIIVALVAKPSQ SGRR A  
Subjt:  MDLFFFDKAEKISSPLPR--CNLLHIFAKFFRFLELCFLLIFLSWTLSRLPIALRISGEYLGKLFGFIATPLFGFLLCNAIIVALVAKPSQFSGRRTA--

Query:  ---ETDRIYQDLIEKTGSRDLTDSPSEDVEIVYQDKQMIAEGIHSIDREIQVKNTDLESESELGHPKLILRTLSEKLNRECVKEQSQKLRRSETEKCRN-
           ETDR+Y+DLI K+G+ DL +SPSED EIV+QDK++IAE I+SIDR+++VK+TD E+ES + HPK+I RTLSEK+ REC K QS+KLRRSETEKCRN 
Subjt:  ---ETDRIYQDLIEKTGSRDLTDSPSEDVEIVYQDKQMIAEGIHSIDREIQVKNTDLESESELGHPKLILRTLSEKLNRECVKEQSQKLRRSETEKCRN-

Query:  LEHSHEILYCQDDLSSEEFQRKIEAFIAKEKKFRREESSAIVVLHCD
        LE SH+I+Y QDDLSSEEFQRKIEAFIA+EKKFRREESSAI VLH D
Subjt:  LEHSHEILYCQDDLSSEEFQRKIEAFIAKEKKFRREESSAIVVLHCD

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT4G34560.1 unknown protein

3.9e-06

25.81

Show/hide

Query:  FAKFFRFLELCFLLIFLSWTLSRLPIALRISGEYLGKLFGFIATPLFGFLLCNAIIVALVAKPSQFSGRR-------TAETDRIYQDLIEKTGSRDLTDS
        F   FR  EL  L+I +S  LS  P +++ISG+   +   F+ +P F F + NAI++ L+AK  ++S           A ++ +YQ+ + K+  +     
Subjt:  FAKFFRFLELCFLLIFLSWTLSRLPIALRISGEYLGKLFGFIATPLFGFLLCNAIIVALVAKPSQFSGRR-------TAETDRIYQDLIEKTGSRDLTDS

Query:  PSEDVEIVYQDKQMIAEGIHSIDREIQVKNTDLESESELGHPKLILRTLSEKLNRECVKEQSQKLRRSETEKCRNLEHSHEILYCQDDLSSEEFQRKIEA
              +VY  K    E +       +V     +S       K +  T  EK  +  V E+  ++  S+ +    ++        +D +S+E+F+ KIEA
Subjt:  PSEDVEIVYQDKQMIAEGIHSIDREIQVKNTDLESESELGHPKLILRTLSEKLNRECVKEQSQKLRRSETEKCRNLEHSHEILYCQDDLSSEEFQRKIEA

Query:  FIAKEKKFRREESSAIV
        FIA++K+ +++E   I+
Subjt:  FIAKEKKFRREESSAIV

AT5G66440.1 unknown protein

3.2e-29

Show/hide

Query:  MDLFFFD--KAEKISSPLPRCNLLHIFAKFFRFLELCFLLIFLSWTLSRLPIALRISGEYLGKLFGFIATPLFGFLLCNAIIVALVAKPSQFSGRRTAET
        MD F FD  KAEK +  L R N      +FFR  E+C  L+F+ WT S+LP  ++ISG +L ++   I+TPLF FLL N+I+V L+ K S  +    A  
Subjt:  MDLFFFD--KAEKISSPLPRCNLLHIFAKFFRFLELCFLLIFLSWTLSRLPIALRISGEYLGKLFGFIATPLFGFLLCNAIIVALVAKPSQFSGRRTAET

Query:  D-RIYQDLIEKTGSRDLTDSPSEDVEIVYQDKQMIAEGIHS---IDREIQVKNTDLESESELGHPKLILRTLSEKLNRE----CVKEQSQKLRRSETEK-
        +  IYQ  +    +R           IVY DKQ+I   + S   +  +  + + +++S+S   H K+  R+ S+   ++     +    + L+RSETEK 
Subjt:  D-RIYQDLIEKTGSRDLTDSPSEDVEIVYQDKQMIAEGIHS---IDREIQVKNTDLESESELGHPKLILRTLSEKLNRE----CVKEQSQKLRRSETEK-

Query:  CRNLEH----SHEILYCQDDLSSEEFQRKIEAFIAKEKKFRREESSAIVV
        C+  E+      E  Y +DDLS+EEFQ+ IEAFIAK++ FRR+ES A+VV
Subjt:  CRNLEH----SHEILYCQDDLSSEEFQRKIEAFIAKEKKFRREESSAIVV

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGATTTGTTCTTCTTCGACAAGGCAGAGAAGATTTCTAGCCCTCTTCCCAGATGCAATCTCCTCCATATCTTCGCCAAGTTCTTCCGTTTCCTAGAGCTTTGCTTTCT
ACTCATTTTCCTCTCCTGGACCCTCTCTCGCCTTCCAATCGCCCTCAGAATCTCCGGCGAGTATTTAGGAAAACTCTTCGGCTTCATCGCCACTCCTCTCTTCGGATTCC
TCCTCTGCAACGCCATCATCGTCGCTCTCGTAGCCAAGCCTTCCCAATTCTCAGGCCGCAGAACCGCCGAAACCGATCGGATTTACCAAGACCTAATTGAAAAAACCGGA
AGCAGAGACCTAACTGATTCGCCCTCGGAGGACGTGGAGATTGTGTACCAGGACAAACAGATGATTGCGGAGGGGATTCATTCAATCGATCGTGAAATTCAAGTGAAGAA
CACGGATCTGGAGTCGGAATCAGAATTAGGTCATCCAAAATTGATATTGAGGACTCTTTCGGAGAAACTTAACCGAGAATGCGTGAAAGAACAGAGTCAGAAGCTCCGGC
GATCAGAGACGGAGAAGTGCCGGAATCTGGAGCATTCACACGAAATTTTGTACTGCCAGGACGATTTGAGCAGTGAGGAATTTCAGAGGAAGATTGAGGCGTTCATAGCG
AAGGAGAAGAAGTTTCGACGGGAAGAATCTTCCGCCATTGTTGTACTCCACTGCGACGGTTAA

mRNA sequence

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Protein sequence

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MDLFFFDKAEKISSPLPRCNLLHIFAKFFRFLELCFLLIFLSWTLSRLPIALRISGEYLGKLFGFIATPLFGFLLCNAIIVALVAKPSQFSGRRTAETDRIYQDLIEKTG
SRDLTDSPSEDVEIVYQDKQMIAEGIHSIDREIQVKNTDLESESELGHPKLILRTLSEKLNRECVKEQSQKLRRSETEKCRNLEHSHEILYCQDDLSSEEFQRKIEAFIA
KEKKFRREESSAIVVLHCDG

HG10002010 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome