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HG10002016 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10002016
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionProlyl-tRNA synthetase
Genome locationChr11:2655419..2656527
RNA-Seq ExpressionHG10002016
SyntenyHG10002016
Gene Ontology termsGO:0005622 - intracellular (cellular component)
GO:0016874 - ligase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF7826567.1 proline--tRNA ligase, chloroplastic/mitochondrial [Senna tora]1.1e-0944.34Show/hide
Query:  MVANAELTEYGHVRVTMVIRPYGSAIFEADQGYLNVKFKETNHRKEHILSTGMALLTRALKHLFARNENLIVDPSLNHIHSLRKKLVMLQLALVTV-GEK
        ++ANAEL +YG VR TMVIRPYG AI+E+ Q YLNVKFKET H   + L        + + + F       ++   +H+         L+LA+VT+ G K
Subjt:  MVANAELTEYGHVRVTMVIRPYGSAIFEADQGYLNVKFKETNHRKEHILSTGMALLTRALKHLFARNENLIVDPSLNHIHSLRKKLVMLQLALVTV-GEK

Query:  ELEEKL
        ELEEKL
Subjt:  ELEEKL

KAG6425666.1 hypothetical protein SASPL_116111 [Salvia splendens]2.4e-0945.28Show/hide
Query:  MVANAELTEYGHVRVTMVIRPYGSAIFEADQGYLNVKFKETNHRKEHILSTGMALLTRALKHLFARNENLIVDPSLNHIHSLRKKLVMLQLALVTV-GEK
        ++ANAEL +YG VR TMVIRPYG AI+EA Q YLNVKFKET H   +          + + + F       ++   +H+          +LALVTV G K
Subjt:  MVANAELTEYGHVRVTMVIRPYGSAIFEADQGYLNVKFKETNHRKEHILSTGMALLTRALKHLFARNENLIVDPSLNHIHSLRKKLVMLQLALVTV-GEK

Query:  ELEEKL
        ELEEKL
Subjt:  ELEEKL

XP_021892106.1 proline--tRNA ligase, chloroplastic/mitochondrial [Carica papaya]2.4e-0945.28Show/hide
Query:  MVANAELTEYGHVRVTMVIRPYGSAIFEADQGYLNVKFKETNHRKEHILSTGMALLTRALKHLFARNENLIVDPSLNHIHSLRKKLVMLQLALVTV-GEK
        ++ANAEL +YG VR TMVIRPYG AI+EA Q YLNVKFKET H   +          + + + F       ++   +H+          +LALVTV G K
Subjt:  MVANAELTEYGHVRVTMVIRPYGSAIFEADQGYLNVKFKETNHRKEHILSTGMALLTRALKHLFARNENLIVDPSLNHIHSLRKKLVMLQLALVTV-GEK

Query:  ELEEKL
        ELEEKL
Subjt:  ELEEKL

XP_024172424.1 proline--tRNA ligase, chloroplastic/mitochondrial [Rosa chinensis]2.4e-0944.34Show/hide
Query:  MVANAELTEYGHVRVTMVIRPYGSAIFEADQGYLNVKFKETNHRKEHILSTGMALLTRALKHLFARNENLIVDPSLNHIHSLRKKLVMLQLALVTV-GEK
        ++ANAEL +YG VR TMVIRPYG AI+EA Q YLNVKFKET H   +          + + + F       ++   +H+          +LALVT+ G K
Subjt:  MVANAELTEYGHVRVTMVIRPYGSAIFEADQGYLNVKFKETNHRKEHILSTGMALLTRALKHLFARNENLIVDPSLNHIHSLRKKLVMLQLALVTV-GEK

Query:  ELEEKL
        ELEEKL
Subjt:  ELEEKL

XP_039046431.1 proline--tRNA ligase, chloroplastic/mitochondrial-like [Hibiscus syriacus]1.4e-0945.28Show/hide
Query:  MVANAELTEYGHVRVTMVIRPYGSAIFEADQGYLNVKFKETNHRKEHILSTGMALLTRALKHLFARNENLIVDPSLNHIHSLRKKLVMLQLALVTV-GEK
        ++ANAEL +YG VR TMVIRPYG AI+EA Q YLNVKFKET H   +          + + + F       ++   +H+          +LALVTV G K
Subjt:  MVANAELTEYGHVRVTMVIRPYGSAIFEADQGYLNVKFKETNHRKEHILSTGMALLTRALKHLFARNENLIVDPSLNHIHSLRKKLVMLQLALVTV-GEK

Query:  ELEEKL
        ELEEKL
Subjt:  ELEEKL

TrEMBL top hitse value%identityAlignment
A0A022PVN1 Prolyl-tRNA synthetase1.1e-0944.34Show/hide
Query:  MVANAELTEYGHVRVTMVIRPYGSAIFEADQGYLNVKFKETNHRKEHILSTGMALLTRALKHLFARNENLIVDPSLNHIHSLRKKLVMLQLALVTV-GEK
        ++ANAEL +YG VR TMVIRPYG AI+EA Q YLNVKFKET H   +          + + + F       ++   +H+          +LALVT+ G K
Subjt:  MVANAELTEYGHVRVTMVIRPYGSAIFEADQGYLNVKFKETNHRKEHILSTGMALLTRALKHLFARNENLIVDPSLNHIHSLRKKLVMLQLALVTV-GEK

Query:  ELEEKL
        ELEEKL
Subjt:  ELEEKL

A0A1S3YTC2 Prolyl-tRNA synthetase1.1e-0945.28Show/hide
Query:  MVANAELTEYGHVRVTMVIRPYGSAIFEADQGYLNVKFKETNHRKEHILSTGMALLTRALKHLFARNENLIVDPSLNHIHSLRKKLVMLQLALVTV-GEK
        ++ANAEL +YG VR TMVIRPYG AI+EA Q YLNVKFKET H   +          + + + F       ++   +H+          +LALVTV G K
Subjt:  MVANAELTEYGHVRVTMVIRPYGSAIFEADQGYLNVKFKETNHRKEHILSTGMALLTRALKHLFARNENLIVDPSLNHIHSLRKKLVMLQLALVTV-GEK

Query:  ELEEKL
        ELEEKL
Subjt:  ELEEKL

A0A2P6P843 Prolyl-tRNA synthetase1.1e-0944.34Show/hide
Query:  MVANAELTEYGHVRVTMVIRPYGSAIFEADQGYLNVKFKETNHRKEHILSTGMALLTRALKHLFARNENLIVDPSLNHIHSLRKKLVMLQLALVTV-GEK
        ++ANAEL +YG VR TMVIRPYG AI+EA Q YLNVKFKET H   +          + + + F       ++   +H+          +LALVT+ G K
Subjt:  MVANAELTEYGHVRVTMVIRPYGSAIFEADQGYLNVKFKETNHRKEHILSTGMALLTRALKHLFARNENLIVDPSLNHIHSLRKKLVMLQLALVTV-GEK

Query:  ELEEKL
        ELEEKL
Subjt:  ELEEKL

A0A5C7IRM5 Prolyl-tRNA synthetase1.1e-0945.28Show/hide
Query:  MVANAELTEYGHVRVTMVIRPYGSAIFEADQGYLNVKFKETNHRKEHILSTGMALLTRALKHLFARNENLIVDPSLNHIHSLRKKLVMLQLALVTV-GEK
        ++ANAEL +YG VR TMVIRPYG AI+EA Q YLNVKFKET H   +          + + + F       ++   +H+          +LALVTV G K
Subjt:  MVANAELTEYGHVRVTMVIRPYGSAIFEADQGYLNVKFKETNHRKEHILSTGMALLTRALKHLFARNENLIVDPSLNHIHSLRKKLVMLQLALVTV-GEK

Query:  ELEEKL
        ELEEKL
Subjt:  ELEEKL

A0A6A3CZI1 Prolyl-tRNA synthetase1.1e-0945.28Show/hide
Query:  MVANAELTEYGHVRVTMVIRPYGSAIFEADQGYLNVKFKETNHRKEHILSTGMALLTRALKHLFARNENLIVDPSLNHIHSLRKKLVMLQLALVTV-GEK
        ++ANAEL +YG VR TMVIRPYG AI+EA Q YLNVKFKET H   +          + + + F       ++   +H+          +LALVTV G K
Subjt:  MVANAELTEYGHVRVTMVIRPYGSAIFEADQGYLNVKFKETNHRKEHILSTGMALLTRALKHLFARNENLIVDPSLNHIHSLRKKLVMLQLALVTV-GEK

Query:  ELEEKL
        ELEEKL
Subjt:  ELEEKL

SwissProt top hitse value%identityAlignment
A0Q2I3 Proline--tRNA ligase5.7e-0650Show/hide
Query:  MVANAELTEYGHVRVTMVIRPYGSAIFEADQGYLNVKFKETNHRKEHI
        +V  AEL +Y  V+  M+IRPYG AI+E  Q YL+ KFKET H   ++
Subjt:  MVANAELTEYGHVRVTMVIRPYGSAIFEADQGYLNVKFKETNHRKEHI

Q5SM28 Proline--tRNA ligase5.7e-0639.73Show/hide
Query:  MVANAELTEYGHVRVTMVIRPYGSAIFEADQGYLNVKFKETNHRKEHI-LSTGMALLTRALKHLFARNENLIV
        ++  AEL +YG VR T+V+RPYG AI+E  Q  L+  FKET H+  +  L   M+ L +  +H+   +  L V
Subjt:  MVANAELTEYGHVRVTMVIRPYGSAIFEADQGYLNVKFKETNHRKEHI-LSTGMALLTRALKHLFARNENLIV

Q6F0Y9 Proline--tRNA ligase8.2e-0556.41Show/hide
Query:  VANAELTEYGHVRVTMVIRPYGSAIFEADQGYLNVKFKE
        V NA+L  YG V+ T++ RPYG AI+E  Q YL+ KFKE
Subjt:  VANAELTEYGHVRVTMVIRPYGSAIFEADQGYLNVKFKE

Q72GF9 Proline--tRNA ligase5.7e-0639.73Show/hide
Query:  MVANAELTEYGHVRVTMVIRPYGSAIFEADQGYLNVKFKETNHRKEHI-LSTGMALLTRALKHLFARNENLIV
        ++  AEL +YG VR T+V+RPYG AI+E  Q  L+  FKET H+  +  L   M+ L +  +H+   +  L V
Subjt:  MVANAELTEYGHVRVTMVIRPYGSAIFEADQGYLNVKFKETNHRKEHI-LSTGMALLTRALKHLFARNENLIV

Q9FYR6 Proline--tRNA ligase, chloroplastic/mitochondrial1.2e-1144.34Show/hide
Query:  MVANAELTEYGHVRVTMVIRPYGSAIFEADQGYLNVKFKETNHRKEHILSTGMALLTRALKHLFARNENLIVDPSLNHIHSLRKKLVMLQLALVTV-GEK
        ++A+AEL +YG VR TMVIRPYG AI+EA Q YLNVKFKET H   +          + + + F       ++   +H+          +LALVTV G K
Subjt:  MVANAELTEYGHVRVTMVIRPYGSAIFEADQGYLNVKFKETNHRKEHILSTGMALLTRALKHLFARNENLIVDPSLNHIHSLRKKLVMLQLALVTV-GEK

Query:  ELEEKL
        ELEEKL
Subjt:  ELEEKL

Arabidopsis top hitse value%identityAlignment
AT5G52520.1 Class II aaRS and biotin synthetases superfamily protein8.4e-1344.34Show/hide
Query:  MVANAELTEYGHVRVTMVIRPYGSAIFEADQGYLNVKFKETNHRKEHILSTGMALLTRALKHLFARNENLIVDPSLNHIHSLRKKLVMLQLALVTV-GEK
        ++A+AEL +YG VR TMVIRPYG AI+EA Q YLNVKFKET H   +          + + + F       ++   +H+          +LALVTV G K
Subjt:  MVANAELTEYGHVRVTMVIRPYGSAIFEADQGYLNVKFKETNHRKEHILSTGMALLTRALKHLFARNENLIVDPSLNHIHSLRKKLVMLQLALVTV-GEK

Query:  ELEEKL
        ELEEKL
Subjt:  ELEEKL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTAGCCAACGCCGAGCTCACGGAATATGGTCATGTTCGAGTTACCATGGTTATTCGTCCCTATGGCTCCGCCATTTTCGAAGCAGATCAGGGTTATTTGAATGTTAA
GTTCAAGGAGACCAATCACAGGAAGGAACATATACTTTCCACAGGTATGGCTCTGCTAACCCGGGCTCTTAAACATCTATTTGCTAGAAATGAAAATTTGATTGTTGATC
CCAGTTTAAACCATATTCATTCATTGAGAAAGAAGCTAGTCATGTTGCAGTTAGCTCTTGTAACTGTAGGAGAGAAAGAACTTGAAGAAAAGCTTGGGGAGTACATAGAC
CCAGTTAAGCTAATGGCCCATTTCTGGGCGTTCATTGCTCATTAG
mRNA sequenceShow/hide mRNA sequence
ATGGTAGCCAACGCCGAGCTCACGGAATATGGTCATGTTCGAGTTACCATGGTTATTCGTCCCTATGGCTCCGCCATTTTCGAAGCAGATCAGGGTTATTTGAATGTTAA
GTTCAAGGAGACCAATCACAGGAAGGAACATATACTTTCCACAGGTATGGCTCTGCTAACCCGGGCTCTTAAACATCTATTTGCTAGAAATGAAAATTTGATTGTTGATC
CCAGTTTAAACCATATTCATTCATTGAGAAAGAAGCTAGTCATGTTGCAGTTAGCTCTTGTAACTGTAGGAGAGAAAGAACTTGAAGAAAAGCTTGGGGAGTACATAGAC
CCAGTTAAGCTAATGGCCCATTTCTGGGCGTTCATTGCTCATTAG
Protein sequenceShow/hide protein sequence
MVANAELTEYGHVRVTMVIRPYGSAIFEADQGYLNVKFKETNHRKEHILSTGMALLTRALKHLFARNENLIVDPSLNHIHSLRKKLVMLQLALVTVGEKELEEKLGEYID
PVKLMAHFWAFIAH