; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

HG10002031 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10002031
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionF-box protein SKIP23-like
Genome locationChr11:2731511..2732260
RNA-Seq ExpressionHG10002031
SyntenyHG10002031
Gene Ontology termsNA
InterPro domainsIPR005174 - Domain unknown function DUF295


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_019420605.1 PREDICTED: F-box protein SKIP23-like [Lupinus angustifolius]1.4e-2429.88Show/hide
Query:  VHVLHLNKIVLSPCPP-HSNDFIAIAIHGKLSRLSFTKLGKNGWTEIPTSRSSDFHDCVISNGKIYAINSRAELW----------VSNIETPKEMVNLGL
        +  +HL+KI++S  P  H++DF+A+AI+G+  +L+  ++G + WT   T +S    D +   GKIY I+  A+L+          +  +  PK+      
Subjt:  VHVLHLNKIVLSPCPP-HSNDFIAIAIHGKLSRLSFTKLGKNGWTEIPTSRSSDFHDCVISNGKIYAINSRAELW----------VSNIETPKEMVNLGL

Query:  KRLKLKKWSKLYLVKTDNDELLMIERRLNIELLLNHWDYLDRDYETIGFNLFKLDSSNERLRWIKVNNLDNSCAIFLGLNTSIYHRGLLNG------NCI
         R++    +  YL++    +LL++ RR   +    +    ++ Y T  FN++KLD S +  +W +V+++ NS  + +G NTSI      +G      NCI
Subjt:  KRLKLKKWSKLYLVKTDNDELLMIERRLNIELLLNHWDYLDRDYETIGFNLFKLDSSNERLRWIKVNNLDNSCAIFLGLNTSIYHRGLLNG------NCI

Query:  YYSDDQTKRHVYDYLGGHDFGVFDIANNSCRRLLDDHRLIRNFVWPPPVWV
        Y+SD+  +       GGHD G+F++ NN+ ++   D    R F+ PPP+W+
Subjt:  YYSDDQTKRHVYDYLGGHDFGVFDIANNSCRRLLDDHRLIRNFVWPPPVWV

XP_022155366.1 F-box protein SKIP23-like [Momordica charantia]4.7e-3341.94Show/hide
Query:  SQIIVHVLHLNKIVLSPCPPHSNDFIAIAIHGKLSRLSFTKLGKNGWTEIPTSRSSDFHDCVISNGKIYAINSRAELWVSNI-ETPKEMVNLGLKRLKLK
        S+  VH  ++ KIVLS   P SNDF+A+AI+    +L+FTK G + WT I TS  ++FHDC+  +GKIYA+N   +L V +I +TP ++VNL LKR KL+
Subjt:  SQIIVHVLHLNKIVLSPCPPHSNDFIAIAIHGKLSRLSFTKLGKNGWTEIPTSRSSDFHDCVISNGKIYAINSRAELWVSNI-ETPKEMVNLGLKRLKLK

Query:  KWSKLYLVKTDNDELLMIERRLNIELLLNHWDYLDRDYETIGFNLFKLDSSNERLRWIKVNNLDNSCAIFLGLNTSIYHRGLLNGNCIYYSDDQTKRHVY
          SKLY+V+T N +LLM+ER      L N        Y+TIGFNLFKLDS      W+K+ NLD  C IFLGLNTS+         C             
Subjt:  KWSKLYLVKTDNDELLMIERRLNIELLLNHWDYLDRDYETIGFNLFKLDSSNERLRWIKVNNLDNSCAIFLGLNTSIYHRGLLNGNCIYYSDDQTKRHVY

Query:  DYLGGHDFGVFDIANNSCRRLLDDHRLI-------RNFVWPPPVWVAL
                    I++ SC +L D  R           FVWP P+WV L
Subjt:  DYLGGHDFGVFDIANNSCRRLLDDHRLI-------RNFVWPPPVWVAL

XP_022155372.1 F-box protein SKIP23-like [Momordica charantia]4.7e-4147.18Show/hide
Query:  SQIIVHVLHLNKIVLSPCPPHSNDFIAIAIHGKLSRLSFTKLGKNGWTEIPTSRSSDFHDCVISNGKIYAINSRAELWVSNIE-TPKEMVNLGLKRLKLK
        S+  VH  ++ KIVLS   P SNDF+A+AI+    +L+FTK G + WT I TS  ++FHDC+  +GKIYA+N   +L V +I+ TP ++VNL LKR KL+
Subjt:  SQIIVHVLHLNKIVLSPCPPHSNDFIAIAIHGKLSRLSFTKLGKNGWTEIPTSRSSDFHDCVISNGKIYAINSRAELWVSNIE-TPKEMVNLGLKRLKLK

Query:  KWSKLYLVKTDNDELLMIERRLNIELLLNHWDYLDRDYETIGFNLFKLDSSNERLRWIKVNNLDNSCAIFLGLNTSIYHRG----LLNGNCIYYSDDQTK
          SKLYLV+T N ++LM+ER      L N        Y+TIGFNLFK DS      W+K+ NLD  C IFLGLNTSI         L GN IYY+ D  K
Subjt:  KWSKLYLVKTDNDELLMIERRLNIELLLNHWDYLDRDYETIGFNLFKLDSSNERLRWIKVNNLDNSCAIFLGLNTSIYHRG----LLNGNCIYYSDDQTK

Query:  RHVYDYLGGH---DFGVFDIANNSCRRLLDDHRLIRNFVWPPPVWVAL
              +G H   DFGVFD+ + S R L  D      FVWP P+WV L
Subjt:  RHVYDYLGGH---DFGVFDIANNSCRRLLDDHRLIRNFVWPPPVWVAL

XP_022156879.1 putative F-box protein At4g17565 [Momordica charantia]8.9e-2441.67Show/hide
Query:  QIIVHVLHLNKIVLSPCPPHSND-FIAIAIHGKLSRLSFTKLGKNGWTEIPTSRSSDFHDCVISNGKIYAINSRAELWVSNIETPKEMVNLGLK------
        Q  V V +++KI    C  HS D FIA+AI+   S+++FTKLG + WT IPT   SD  DC++ + KIYA+    +L VS I+ P ++  + +K      
Subjt:  QIIVHVLHLNKIVLSPCPPHSND-FIAIAIHGKLSRLSFTKLGKNGWTEIPTSRSSDFHDCVISNGKIYAINSRAELWVSNIETPKEMVNLGLK------

Query:  RLKLKKWSKLYLVKTDNDELLMIERRLNIE--LLLNHWDYLDRDYETIGFNLFKLDSSNERLRWIKVNNLDNSCAIFLGLNTSIYHRG----LLNGNCIY
        R +L   S LYLV  D DELLM+ER   ++   L     Y  +   T+GFNL+KLD    R  W K+ NLD  C+IFLGLNTS+         L GN I+
Subjt:  RLKLKKWSKLYLVKTDNDELLMIERRLNIE--LLLNHWDYLDRDYETIGFNLFKLDSSNERLRWIKVNNLDNSCAIFLGLNTSIYHRG----LLNGNCIY

Query:  YSDD
        Y++D
Subjt:  YSDD

XP_038888322.1 putative F-box protein At2g16290 [Benincasa hispida]2.6e-9280.6Show/hide
Query:  LGKNGWTEIPTSRSSDFHDCVISNGKIYAINSRAELWVSNIETPKEMVNLGLKRLKLKKWSKLYLVKTDNDELLMIERRLNIELLLNHWDYLDRDYETIG
        LGKNGW EIPTS +SDFHDC+I +GKIYAINSRAELWVSNIETPKEMVNLGLKRL+LKK SKLYLVK DND+LLMIERR NIE L+ +W+Y +RDYET+G
Subjt:  LGKNGWTEIPTSRSSDFHDCVISNGKIYAINSRAELWVSNIETPKEMVNLGLKRLKLKKWSKLYLVKTDNDELLMIERRLNIELLLNHWDYLDRDYETIG

Query:  FNLFKLDSSNERLRWIKVNNLDNSCAIFLGLNTSIYHRGLLNGNCIYYSDDQTKRHVYDYLGGHDFGVFDIANNSCRRLLDDHRLIRNFVWPPPVWVALK
        FNLFK+DSS E+LRWIKVNNLD+ C +FLGLNTSI +RG LNGN IYYSDDQTKRHVYD++GGHDFGV+DIAN SCRRLLDD R+I NFVWPPPVWV LK
Subjt:  FNLFKLDSSNERLRWIKVNNLDNSCAIFLGLNTSIYHRGLLNGNCIYYSDDQTKRHVYDYLGGHDFGVFDIANNSCRRLLDDHRLIRNFVWPPPVWVALK

Query:  D
        +
Subjt:  D

TrEMBL top hitse value%identityAlignment
A0A4P1QTT0 DUF295 domain-containing protein6.7e-2529.88Show/hide
Query:  VHVLHLNKIVLSPCPP-HSNDFIAIAIHGKLSRLSFTKLGKNGWTEIPTSRSSDFHDCVISNGKIYAINSRAELW----------VSNIETPKEMVNLGL
        +  +HL+KI++S  P  H++DF+A+AI+G+  +L+  ++G + WT   T +S    D +   GKIY I+  A+L+          +  +  PK+      
Subjt:  VHVLHLNKIVLSPCPP-HSNDFIAIAIHGKLSRLSFTKLGKNGWTEIPTSRSSDFHDCVISNGKIYAINSRAELW----------VSNIETPKEMVNLGL

Query:  KRLKLKKWSKLYLVKTDNDELLMIERRLNIELLLNHWDYLDRDYETIGFNLFKLDSSNERLRWIKVNNLDNSCAIFLGLNTSIYHRGLLNG------NCI
         R++    +  YL++    +LL++ RR   +    +    ++ Y T  FN++KLD S +  +W +V+++ NS  + +G NTSI      +G      NCI
Subjt:  KRLKLKKWSKLYLVKTDNDELLMIERRLNIELLLNHWDYLDRDYETIGFNLFKLDSSNERLRWIKVNNLDNSCAIFLGLNTSIYHRGLLNG------NCI

Query:  YYSDDQTKRHVYDYLGGHDFGVFDIANNSCRRLLDDHRLIRNFVWPPPVWV
        Y+SD+  +       GGHD G+F++ NN+ ++   D    R F+ PPP+W+
Subjt:  YYSDDQTKRHVYDYLGGHDFGVFDIANNSCRRLLDDHRLIRNFVWPPPVWV

A0A6J1DP54 F-box protein SKIP23-like2.3e-4147.18Show/hide
Query:  SQIIVHVLHLNKIVLSPCPPHSNDFIAIAIHGKLSRLSFTKLGKNGWTEIPTSRSSDFHDCVISNGKIYAINSRAELWVSNIE-TPKEMVNLGLKRLKLK
        S+  VH  ++ KIVLS   P SNDF+A+AI+    +L+FTK G + WT I TS  ++FHDC+  +GKIYA+N   +L V +I+ TP ++VNL LKR KL+
Subjt:  SQIIVHVLHLNKIVLSPCPPHSNDFIAIAIHGKLSRLSFTKLGKNGWTEIPTSRSSDFHDCVISNGKIYAINSRAELWVSNIE-TPKEMVNLGLKRLKLK

Query:  KWSKLYLVKTDNDELLMIERRLNIELLLNHWDYLDRDYETIGFNLFKLDSSNERLRWIKVNNLDNSCAIFLGLNTSIYHRG----LLNGNCIYYSDDQTK
          SKLYLV+T N ++LM+ER      L N        Y+TIGFNLFK DS      W+K+ NLD  C IFLGLNTSI         L GN IYY+ D  K
Subjt:  KWSKLYLVKTDNDELLMIERRLNIELLLNHWDYLDRDYETIGFNLFKLDSSNERLRWIKVNNLDNSCAIFLGLNTSIYHRG----LLNGNCIYYSDDQTK

Query:  RHVYDYLGGH---DFGVFDIANNSCRRLLDDHRLIRNFVWPPPVWVAL
              +G H   DFGVFD+ + S R L  D      FVWP P+WV L
Subjt:  RHVYDYLGGH---DFGVFDIANNSCRRLLDDHRLIRNFVWPPPVWVAL

A0A6J1DRH7 F-box protein SKIP23-like2.3e-3341.94Show/hide
Query:  SQIIVHVLHLNKIVLSPCPPHSNDFIAIAIHGKLSRLSFTKLGKNGWTEIPTSRSSDFHDCVISNGKIYAINSRAELWVSNI-ETPKEMVNLGLKRLKLK
        S+  VH  ++ KIVLS   P SNDF+A+AI+    +L+FTK G + WT I TS  ++FHDC+  +GKIYA+N   +L V +I +TP ++VNL LKR KL+
Subjt:  SQIIVHVLHLNKIVLSPCPPHSNDFIAIAIHGKLSRLSFTKLGKNGWTEIPTSRSSDFHDCVISNGKIYAINSRAELWVSNI-ETPKEMVNLGLKRLKLK

Query:  KWSKLYLVKTDNDELLMIERRLNIELLLNHWDYLDRDYETIGFNLFKLDSSNERLRWIKVNNLDNSCAIFLGLNTSIYHRGLLNGNCIYYSDDQTKRHVY
          SKLY+V+T N +LLM+ER      L N        Y+TIGFNLFKLDS      W+K+ NLD  C IFLGLNTS+         C             
Subjt:  KWSKLYLVKTDNDELLMIERRLNIELLLNHWDYLDRDYETIGFNLFKLDSSNERLRWIKVNNLDNSCAIFLGLNTSIYHRGLLNGNCIYYSDDQTKRHVY

Query:  DYLGGHDFGVFDIANNSCRRLLDDHRLI-------RNFVWPPPVWVAL
                    I++ SC +L D  R           FVWP P+WV L
Subjt:  DYLGGHDFGVFDIANNSCRRLLDDHRLI-------RNFVWPPPVWVAL

A0A6J1DUW8 putative F-box protein At4g175654.3e-2441.67Show/hide
Query:  QIIVHVLHLNKIVLSPCPPHSND-FIAIAIHGKLSRLSFTKLGKNGWTEIPTSRSSDFHDCVISNGKIYAINSRAELWVSNIETPKEMVNLGLK------
        Q  V V +++KI    C  HS D FIA+AI+   S+++FTKLG + WT IPT   SD  DC++ + KIYA+    +L VS I+ P ++  + +K      
Subjt:  QIIVHVLHLNKIVLSPCPPHSND-FIAIAIHGKLSRLSFTKLGKNGWTEIPTSRSSDFHDCVISNGKIYAINSRAELWVSNIETPKEMVNLGLK------

Query:  RLKLKKWSKLYLVKTDNDELLMIERRLNIE--LLLNHWDYLDRDYETIGFNLFKLDSSNERLRWIKVNNLDNSCAIFLGLNTSIYHRG----LLNGNCIY
        R +L   S LYLV  D DELLM+ER   ++   L     Y  +   T+GFNL+KLD    R  W K+ NLD  C+IFLGLNTS+         L GN I+
Subjt:  RLKLKKWSKLYLVKTDNDELLMIERRLNIE--LLLNHWDYLDRDYETIGFNLFKLDSSNERLRWIKVNNLDNSCAIFLGLNTSIYHRG----LLNGNCIY

Query:  YSDD
        Y++D
Subjt:  YSDD

A0A6P4A3F5 F-box protein SKIP23-like1.3e-2031.2Show/hide
Query:  LNKIVLSPCPPHSNDFIAIAIHGKLSRLSFTKLGKNGWTEIPTSRSSDFHDCVISNGKIYAINSRAEL----------WVSNIETPKEMVNLGLKRLKLK
        + K+VLS  P  +N FIA+AI  +   L+F K G   WT I  + S    D V  +G  YA+N    +           VS IETP++M           
Subjt:  LNKIVLSPCPPHSNDFIAIAIHGKLSRLSFTKLGKNGWTEIPTSRSSDFHDCVISNGKIYAINSRAEL----------WVSNIETPKEMVNLGLKRLKLK

Query:  KWSKLYLVKTDNDELLMIERRLNIELLLNHWDYLDRD----YETIGFNLFKLDSSNERLRWIKVNNLDNSCAIFLGLNTSIYHRGLLN-------GNCIY
          + +  +    D+L +I R L+++     +D +D +    Y T+GF++ K+D      RW KV++L     +F+GLN+S+    LL        GNCIY
Subjt:  KWSKLYLVKTDNDELLMIERRLNIELLLNHWDYLDRD----YETIGFNLFKLDSSNERLRWIKVNNLDNSCAIFLGLNTSIYHRGLLN-------GNCIY

Query:  YSDDQTKRHVYDYLGGHDFGVFDIANNSCRRLLDDHRLIRNFVWPPPVWV
        ++DD ++ +     GGHD G+F + + + +R  + H  +    WPPP+WV
Subjt:  YSDDQTKRHVYDYLGGHDFGVFDIANNSCRRLLDDHRLIRNFVWPPPVWV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTCAAATAATCGTTCATGTTCTTCATTTGAATAAAATTGTGCTTTCACCTTGTCCACCGCATTCCAATGATTTTATTGCGATTGCCATACATGGTAAATTATCAAG
ACTATCTTTTACCAAACTTGGTAAAAATGGGTGGACGGAAATTCCTACATCACGTTCATCAGATTTTCATGATTGTGTAATCTCTAATGGGAAAATTTATGCCATTAATT
CTCGTGCAGAACTTTGGGTCTCCAATATTGAGACCCCAAAAGAGATGGTGAATTTGGGTTTAAAACGACTTAAGTTGAAAAAATGGTCAAAATTGTATTTGGTTAAAACC
GATAATGATGAGTTGTTGATGATTGAGAGACGGTTAAATATTGAACTTCTCTTGAATCATTGGGATTACCTTGACCGTGACTACGAGACTATTGGGTTCAATTTATTCAA
GCTAGATTCAAGCAATGAAAGGTTAAGATGGATCAAAGTTAATAATTTGGATAATTCATGTGCCATCTTTTTGGGGTTGAATACTTCTATCTACCATCGTGGATTATTAA
ATGGTAATTGTATTTACTACTCGGATGACCAAACAAAGCGGCATGTTTATGATTATCTCGGTGGTCATGATTTTGGAGTCTTCGATATAGCAAATAACAGTTGTCGTCGC
TTGTTGGATGATCATCGTCTTATTCGTAATTTTGTTTGGCCTCCTCCAGTATGGGTGGCGCTTAAGGATTCAAATATAGATGTTAGTTAA
mRNA sequenceShow/hide mRNA sequence
ATGAGTCAAATAATCGTTCATGTTCTTCATTTGAATAAAATTGTGCTTTCACCTTGTCCACCGCATTCCAATGATTTTATTGCGATTGCCATACATGGTAAATTATCAAG
ACTATCTTTTACCAAACTTGGTAAAAATGGGTGGACGGAAATTCCTACATCACGTTCATCAGATTTTCATGATTGTGTAATCTCTAATGGGAAAATTTATGCCATTAATT
CTCGTGCAGAACTTTGGGTCTCCAATATTGAGACCCCAAAAGAGATGGTGAATTTGGGTTTAAAACGACTTAAGTTGAAAAAATGGTCAAAATTGTATTTGGTTAAAACC
GATAATGATGAGTTGTTGATGATTGAGAGACGGTTAAATATTGAACTTCTCTTGAATCATTGGGATTACCTTGACCGTGACTACGAGACTATTGGGTTCAATTTATTCAA
GCTAGATTCAAGCAATGAAAGGTTAAGATGGATCAAAGTTAATAATTTGGATAATTCATGTGCCATCTTTTTGGGGTTGAATACTTCTATCTACCATCGTGGATTATTAA
ATGGTAATTGTATTTACTACTCGGATGACCAAACAAAGCGGCATGTTTATGATTATCTCGGTGGTCATGATTTTGGAGTCTTCGATATAGCAAATAACAGTTGTCGTCGC
TTGTTGGATGATCATCGTCTTATTCGTAATTTTGTTTGGCCTCCTCCAGTATGGGTGGCGCTTAAGGATTCAAATATAGATGTTAGTTAA
Protein sequenceShow/hide protein sequence
MSQIIVHVLHLNKIVLSPCPPHSNDFIAIAIHGKLSRLSFTKLGKNGWTEIPTSRSSDFHDCVISNGKIYAINSRAELWVSNIETPKEMVNLGLKRLKLKKWSKLYLVKT
DNDELLMIERRLNIELLLNHWDYLDRDYETIGFNLFKLDSSNERLRWIKVNNLDNSCAIFLGLNTSIYHRGLLNGNCIYYSDDQTKRHVYDYLGGHDFGVFDIANNSCRR
LLDDHRLIRNFVWPPPVWVALKDSNIDVS