CuGenDBv2

Gene ID	HG10002054
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	E3 ubiquitin-protein ligase CCNB1IP1 homolog isoform X4
Genome location	Chr11:2943341..2945962
RNA-Seq Expression	HG10002054
Synteny	HG10002054
Gene Ontology terms	GO:0051026 - chiasma assembly (biological process) GO:0005634 - nucleus (cellular component) GO:0005694 - chromosome (cellular component)
InterPro domains	NA

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_008451733.1 PREDICTED: E3 ubiquitin-protein ligase CCNB1IP1 homolog isoform X3 [Cucumis melo]

2.2e-133

95.72

Show/hide

Query:  RGLMKPVDINPNDEWTNTAMAGISPQTLMKSAYRSVMFYIGQKELEMQYKMNRLMAQCRQKCEVMQEKFTEKLEQVHAAYQKMAKRCQMMEREMENLSKD
        + LMKPVDINPNDEW N AMAGISPQTLMKSAYRSVMFY+GQKELEMQYKMNRLMAQCRQKCEVMQEKFTEKLEQVH+AYQKMAKRCQMMEREMENLSKD
Subjt:  RGLMKPVDINPNDEWTNTAMAGISPQTLMKSAYRSVMFYIGQKELEMQYKMNRLMAQCRQKCEVMQEKFTEKLEQVHAAYQKMAKRCQMMEREMENLSKD

Query:  KQELQEKFAEKSRQKRKLDEMYDQLRNEHESLKRSAIQPVSNFYPRNEPDLFSNPVNLMDNREPMRKDWVVSAPETPGPREEIWPTRQNSGNSGHFDISV
        KQELQEKFAEKSRQKRKLDEMYDQLRNEHESLKRSAIQPV+NFY RNEPDLFSNPVNLMDNRE MRKDW+VSAPETPGPREEIWPTRQNSGNSGHFD+SV
Subjt:  KQELQEKFAEKSRQKRKLDEMYDQLRNEHESLKRSAIQPVSNFYPRNEPDLFSNPVNLMDNREPMRKDWVVSAPETPGPREEIWPTRQNSGNSGHFDISV

Query:  GSPAKQAAPMAMEAGNRRAGAHTAFGSGAGNPSMTLRNLILSPIKRPQLSRRPQMFT
        GSPAKQAAPMAMEAGNRRAGAHTAFGSGAGNPSMTLRNLILSPIKRPQLSRRPQMFT
Subjt:  GSPAKQAAPMAMEAGNRRAGAHTAFGSGAGNPSMTLRNLILSPIKRPQLSRRPQMFT

XP_008451736.1 PREDICTED: E3 ubiquitin-protein ligase CCNB1IP1 homolog isoform X4 [Cucumis melo]

2.2e-133

95.72

Show/hide

Query:  RGLMKPVDINPNDEWTNTAMAGISPQTLMKSAYRSVMFYIGQKELEMQYKMNRLMAQCRQKCEVMQEKFTEKLEQVHAAYQKMAKRCQMMEREMENLSKD
        + LMKPVDINPNDEW N AMAGISPQTLMKSAYRSVMFY+GQKELEMQYKMNRLMAQCRQKCEVMQEKFTEKLEQVH+AYQKMAKRCQMMEREMENLSKD
Subjt:  RGLMKPVDINPNDEWTNTAMAGISPQTLMKSAYRSVMFYIGQKELEMQYKMNRLMAQCRQKCEVMQEKFTEKLEQVHAAYQKMAKRCQMMEREMENLSKD

Query:  KQELQEKFAEKSRQKRKLDEMYDQLRNEHESLKRSAIQPVSNFYPRNEPDLFSNPVNLMDNREPMRKDWVVSAPETPGPREEIWPTRQNSGNSGHFDISV
        KQELQEKFAEKSRQKRKLDEMYDQLRNEHESLKRSAIQPV+NFY RNEPDLFSNPVNLMDNRE MRKDW+VSAPETPGPREEIWPTRQNSGNSGHFD+SV
Subjt:  KQELQEKFAEKSRQKRKLDEMYDQLRNEHESLKRSAIQPVSNFYPRNEPDLFSNPVNLMDNREPMRKDWVVSAPETPGPREEIWPTRQNSGNSGHFDISV

Query:  GSPAKQAAPMAMEAGNRRAGAHTAFGSGAGNPSMTLRNLILSPIKRPQLSRRPQMFT
        GSPAKQAAPMAMEAGNRRAGAHTAFGSGAGNPSMTLRNLILSPIKRPQLSRRPQMFT
Subjt:  GSPAKQAAPMAMEAGNRRAGAHTAFGSGAGNPSMTLRNLILSPIKRPQLSRRPQMFT

XP_038905984.1 E3 ubiquitin-protein ligase CCNB1IP1 homolog isoform X1 [Benincasa hispida]

2.0e-134

96.5

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Query:  RGLMKPVDINPNDEWTNTAMAGISPQTLMKSAYRSVMFYIGQKELEMQYKMNRLMAQCRQKCEVMQEKFTEKLEQVHAAYQKMAKRCQMMEREMENLSKD
        + LMKPVDINPN+EW N AMAGISPQTLMKSAYRSVMFYIGQKELEMQYKMNRLMAQCRQKCEVMQEKFTEKLEQVHAAYQKMAKRCQMMEREMENL+KD
Subjt:  RGLMKPVDINPNDEWTNTAMAGISPQTLMKSAYRSVMFYIGQKELEMQYKMNRLMAQCRQKCEVMQEKFTEKLEQVHAAYQKMAKRCQMMEREMENLSKD

Query:  KQELQEKFAEKSRQKRKLDEMYDQLRNEHESLKRSAIQPVSNFYPRNEPDLFSNPVNLMDNREPMRKDWVVSAPETPGPREEIWPTRQNSGNSGHFDISV
        KQELQEKFAEKSRQKRKLDEMYDQLRNEHESLKRSAIQP SNFYPRNEPDLFSNPVNLMDNREPMRKDWVVSAPETPGPREEIWPTRQNSGNSGHFDISV
Subjt:  KQELQEKFAEKSRQKRKLDEMYDQLRNEHESLKRSAIQPVSNFYPRNEPDLFSNPVNLMDNREPMRKDWVVSAPETPGPREEIWPTRQNSGNSGHFDISV

Query:  GSPAKQAAPMAMEAGNRRAGAHTAFGSGAGNPSMTLRNLILSPIKRPQLSRRPQMFT
        GSPAKQAAPM MEAGNRRAGAHTAFGSG GNPSMTLRNLILSPIKRPQLSRRPQMFT
Subjt:  GSPAKQAAPMAMEAGNRRAGAHTAFGSGAGNPSMTLRNLILSPIKRPQLSRRPQMFT

XP_038905991.1 E3 ubiquitin-protein ligase CCNB1IP1 homolog isoform X2 [Benincasa hispida]

2.0e-134

96.5

Show/hide

Query:  RGLMKPVDINPNDEWTNTAMAGISPQTLMKSAYRSVMFYIGQKELEMQYKMNRLMAQCRQKCEVMQEKFTEKLEQVHAAYQKMAKRCQMMEREMENLSKD
        + LMKPVDINPN+EW N AMAGISPQTLMKSAYRSVMFYIGQKELEMQYKMNRLMAQCRQKCEVMQEKFTEKLEQVHAAYQKMAKRCQMMEREMENL+KD
Subjt:  RGLMKPVDINPNDEWTNTAMAGISPQTLMKSAYRSVMFYIGQKELEMQYKMNRLMAQCRQKCEVMQEKFTEKLEQVHAAYQKMAKRCQMMEREMENLSKD

Query:  KQELQEKFAEKSRQKRKLDEMYDQLRNEHESLKRSAIQPVSNFYPRNEPDLFSNPVNLMDNREPMRKDWVVSAPETPGPREEIWPTRQNSGNSGHFDISV
        KQELQEKFAEKSRQKRKLDEMYDQLRNEHESLKRSAIQP SNFYPRNEPDLFSNPVNLMDNREPMRKDWVVSAPETPGPREEIWPTRQNSGNSGHFDISV
Subjt:  KQELQEKFAEKSRQKRKLDEMYDQLRNEHESLKRSAIQPVSNFYPRNEPDLFSNPVNLMDNREPMRKDWVVSAPETPGPREEIWPTRQNSGNSGHFDISV

Query:  GSPAKQAAPMAMEAGNRRAGAHTAFGSGAGNPSMTLRNLILSPIKRPQLSRRPQMFT
        GSPAKQAAPM MEAGNRRAGAHTAFGSG GNPSMTLRNLILSPIKRPQLSRRPQMFT
Subjt:  GSPAKQAAPMAMEAGNRRAGAHTAFGSGAGNPSMTLRNLILSPIKRPQLSRRPQMFT

XP_038906016.1 E3 ubiquitin-protein ligase CCNB1IP1 homolog isoform X5 [Benincasa hispida]

1.3e-133

97.24

Show/hide

Query:  MKPVDINPNDEWTNTAMAGISPQTLMKSAYRSVMFYIGQKELEMQYKMNRLMAQCRQKCEVMQEKFTEKLEQVHAAYQKMAKRCQMMEREMENLSKDKQE
        MKPVDINPN+EW N AMAGISPQTLMKSAYRSVMFYIGQKELEMQYKMNRLMAQCRQKCEVMQEKFTEKLEQVHAAYQKMAKRCQMMEREMENL+KDKQE
Subjt:  MKPVDINPNDEWTNTAMAGISPQTLMKSAYRSVMFYIGQKELEMQYKMNRLMAQCRQKCEVMQEKFTEKLEQVHAAYQKMAKRCQMMEREMENLSKDKQE

Query:  LQEKFAEKSRQKRKLDEMYDQLRNEHESLKRSAIQPVSNFYPRNEPDLFSNPVNLMDNREPMRKDWVVSAPETPGPREEIWPTRQNSGNSGHFDISVGSP
        LQEKFAEKSRQKRKLDEMYDQLRNEHESLKRSAIQP SNFYPRNEPDLFSNPVNLMDNREPMRKDWVVSAPETPGPREEIWPTRQNSGNSGHFDISVGSP
Subjt:  LQEKFAEKSRQKRKLDEMYDQLRNEHESLKRSAIQPVSNFYPRNEPDLFSNPVNLMDNREPMRKDWVVSAPETPGPREEIWPTRQNSGNSGHFDISVGSP

Query:  AKQAAPMAMEAGNRRAGAHTAFGSGAGNPSMTLRNLILSPIKRPQLSRRPQMFT
        AKQAAPM MEAGNRRAGAHTAFGSG GNPSMTLRNLILSPIKRPQLSRRPQMFT
Subjt:  AKQAAPMAMEAGNRRAGAHTAFGSGAGNPSMTLRNLILSPIKRPQLSRRPQMFT

TrEMBL top hits

e value

%identity

Alignment

A0A1S3BSZ6 E3 ubiquitin-protein ligase CCNB1IP1 homolog isoform X3

1.1e-133

95.72

Show/hide

Query:  RGLMKPVDINPNDEWTNTAMAGISPQTLMKSAYRSVMFYIGQKELEMQYKMNRLMAQCRQKCEVMQEKFTEKLEQVHAAYQKMAKRCQMMEREMENLSKD
        + LMKPVDINPNDEW N AMAGISPQTLMKSAYRSVMFY+GQKELEMQYKMNRLMAQCRQKCEVMQEKFTEKLEQVH+AYQKMAKRCQMMEREMENLSKD
Subjt:  RGLMKPVDINPNDEWTNTAMAGISPQTLMKSAYRSVMFYIGQKELEMQYKMNRLMAQCRQKCEVMQEKFTEKLEQVHAAYQKMAKRCQMMEREMENLSKD

Query:  KQELQEKFAEKSRQKRKLDEMYDQLRNEHESLKRSAIQPVSNFYPRNEPDLFSNPVNLMDNREPMRKDWVVSAPETPGPREEIWPTRQNSGNSGHFDISV
        KQELQEKFAEKSRQKRKLDEMYDQLRNEHESLKRSAIQPV+NFY RNEPDLFSNPVNLMDNRE MRKDW+VSAPETPGPREEIWPTRQNSGNSGHFD+SV
Subjt:  KQELQEKFAEKSRQKRKLDEMYDQLRNEHESLKRSAIQPVSNFYPRNEPDLFSNPVNLMDNREPMRKDWVVSAPETPGPREEIWPTRQNSGNSGHFDISV

Query:  GSPAKQAAPMAMEAGNRRAGAHTAFGSGAGNPSMTLRNLILSPIKRPQLSRRPQMFT
        GSPAKQAAPMAMEAGNRRAGAHTAFGSGAGNPSMTLRNLILSPIKRPQLSRRPQMFT
Subjt:  GSPAKQAAPMAMEAGNRRAGAHTAFGSGAGNPSMTLRNLILSPIKRPQLSRRPQMFT

A0A1S3BTB4 E3 ubiquitin-protein ligase CCNB1IP1 homolog isoform X4

1.1e-133

95.72

Show/hide

Query:  RGLMKPVDINPNDEWTNTAMAGISPQTLMKSAYRSVMFYIGQKELEMQYKMNRLMAQCRQKCEVMQEKFTEKLEQVHAAYQKMAKRCQMMEREMENLSKD
        + LMKPVDINPNDEW N AMAGISPQTLMKSAYRSVMFY+GQKELEMQYKMNRLMAQCRQKCEVMQEKFTEKLEQVH+AYQKMAKRCQMMEREMENLSKD
Subjt:  RGLMKPVDINPNDEWTNTAMAGISPQTLMKSAYRSVMFYIGQKELEMQYKMNRLMAQCRQKCEVMQEKFTEKLEQVHAAYQKMAKRCQMMEREMENLSKD

Query:  KQELQEKFAEKSRQKRKLDEMYDQLRNEHESLKRSAIQPVSNFYPRNEPDLFSNPVNLMDNREPMRKDWVVSAPETPGPREEIWPTRQNSGNSGHFDISV
        KQELQEKFAEKSRQKRKLDEMYDQLRNEHESLKRSAIQPV+NFY RNEPDLFSNPVNLMDNRE MRKDW+VSAPETPGPREEIWPTRQNSGNSGHFD+SV
Subjt:  KQELQEKFAEKSRQKRKLDEMYDQLRNEHESLKRSAIQPVSNFYPRNEPDLFSNPVNLMDNREPMRKDWVVSAPETPGPREEIWPTRQNSGNSGHFDISV

Query:  GSPAKQAAPMAMEAGNRRAGAHTAFGSGAGNPSMTLRNLILSPIKRPQLSRRPQMFT
        GSPAKQAAPMAMEAGNRRAGAHTAFGSGAGNPSMTLRNLILSPIKRPQLSRRPQMFT
Subjt:  GSPAKQAAPMAMEAGNRRAGAHTAFGSGAGNPSMTLRNLILSPIKRPQLSRRPQMFT

A0A1S4DYU3 E3 ubiquitin-protein ligase CCNB1IP1 homolog isoform X1

2.3e-133

96.47

Show/hide

Query:  LMKPVDINPNDEWTNTAMAGISPQTLMKSAYRSVMFYIGQKELEMQYKMNRLMAQCRQKCEVMQEKFTEKLEQVHAAYQKMAKRCQMMEREMENLSKDKQ
        LMKPVDINPNDEW N AMAGISPQTLMKSAYRSVMFY+GQKELEMQYKMNRLMAQCRQKCEVMQEKFTEKLEQVH+AYQKMAKRCQMMEREMENLSKDKQ
Subjt:  LMKPVDINPNDEWTNTAMAGISPQTLMKSAYRSVMFYIGQKELEMQYKMNRLMAQCRQKCEVMQEKFTEKLEQVHAAYQKMAKRCQMMEREMENLSKDKQ

Query:  ELQEKFAEKSRQKRKLDEMYDQLRNEHESLKRSAIQPVSNFYPRNEPDLFSNPVNLMDNREPMRKDWVVSAPETPGPREEIWPTRQNSGNSGHFDISVGS
        ELQEKFAEKSRQKRKLDEMYDQLRNEHESLKRSAIQPV+NFY RNEPDLFSNPVNLMDNRE MRKDW+VSAPETPGPREEIWPTRQNSGNSGHFD+SVGS
Subjt:  ELQEKFAEKSRQKRKLDEMYDQLRNEHESLKRSAIQPVSNFYPRNEPDLFSNPVNLMDNREPMRKDWVVSAPETPGPREEIWPTRQNSGNSGHFDISVGS

Query:  PAKQAAPMAMEAGNRRAGAHTAFGSGAGNPSMTLRNLILSPIKRPQLSRRPQMFT
        PAKQAAPMAMEAGNRRAGAHTAFGSGAGNPSMTLRNLILSPIKRPQLSRRPQMFT
Subjt:  PAKQAAPMAMEAGNRRAGAHTAFGSGAGNPSMTLRNLILSPIKRPQLSRRPQMFT

A0A5A7VBK3 E3 ubiquitin-protein ligase CCNB1IP1-like protein isoform X4

2.3e-133

95.33

Show/hide

Query:  RGLMKPVDINPNDEWTNTAMAGISPQTLMKSAYRSVMFYIGQKELEMQYKMNRLMAQCRQKCEVMQEKFTEKLEQVHAAYQKMAKRCQMMEREMENLSKD
        + LMKPVDINPNDEW N AMAGISPQTLMKSAYRSVMFY+GQKELEMQYKMNRLMAQCRQKCEVMQEKFTEKLEQVH+AYQKMAKRCQMMER+MENLSKD
Subjt:  RGLMKPVDINPNDEWTNTAMAGISPQTLMKSAYRSVMFYIGQKELEMQYKMNRLMAQCRQKCEVMQEKFTEKLEQVHAAYQKMAKRCQMMEREMENLSKD

Query:  KQELQEKFAEKSRQKRKLDEMYDQLRNEHESLKRSAIQPVSNFYPRNEPDLFSNPVNLMDNREPMRKDWVVSAPETPGPREEIWPTRQNSGNSGHFDISV
        KQELQEKFAEKSRQKRKLDEMYDQLRNEHESLKRSAIQPV+NFY RNEPDLFSNPVNLMDNRE MRKDW+VSAPETPGPREEIWPTRQNSGNSGHFD+SV
Subjt:  KQELQEKFAEKSRQKRKLDEMYDQLRNEHESLKRSAIQPVSNFYPRNEPDLFSNPVNLMDNREPMRKDWVVSAPETPGPREEIWPTRQNSGNSGHFDISV

Query:  GSPAKQAAPMAMEAGNRRAGAHTAFGSGAGNPSMTLRNLILSPIKRPQLSRRPQMFT
        GSPAKQAAPMAMEAGNRRAGAHTAFGSGAGNPSMTLRNLILSPIKRPQLSRRPQMFT
Subjt:  GSPAKQAAPMAMEAGNRRAGAHTAFGSGAGNPSMTLRNLILSPIKRPQLSRRPQMFT

A0A6J1J1K9 E3 ubiquitin-protein ligase CCNB1IP1 homolog isoform X1

4.9e-131

94.16

Show/hide

Query:  RGLMKPVDINPNDEWTNTAMAGISPQTLMKSAYRSVMFYIGQKELEMQYKMNRLMAQCRQKCEVMQEKFTEKLEQVHAAYQKMAKRCQMMEREMENLSKD
        + LMKPVDINPNDEW N AMAGI+PQ LMKSAYRSVMFYIGQKELEMQYKMNR++AQCRQKCEVMQEKFTEKLEQVH AYQKMAKRCQMMEREMEN+SKD
Subjt:  RGLMKPVDINPNDEWTNTAMAGISPQTLMKSAYRSVMFYIGQKELEMQYKMNRLMAQCRQKCEVMQEKFTEKLEQVHAAYQKMAKRCQMMEREMENLSKD

Query:  KQELQEKFAEKSRQKRKLDEMYDQLRNEHESLKRSAIQPVSNFYPRNEPDLFSNPVNLMDNREPMRKDWVVSAPETPGPREEIWPTRQNSGNSGHFDISV
        KQELQEKFAEKSRQKRKLDEMYDQLRNEHESLKRSAIQPVSNFYPRNEPDLFSNPV+LMDNREPMRKD +VSAPETPGPREEIWPTRQNSGNSGHFDISV
Subjt:  KQELQEKFAEKSRQKRKLDEMYDQLRNEHESLKRSAIQPVSNFYPRNEPDLFSNPVNLMDNREPMRKDWVVSAPETPGPREEIWPTRQNSGNSGHFDISV

Query:  GSPAKQAAPMAMEAGNRRAGAHTAFGSGAGNPSMTLRNLILSPIKRPQLSRRPQMFT
        GSPAKQAAPMAMEAGNRR GAH AFGSGAGNPSMTLRNLILSPIKRPQLSRRPQMFT
Subjt:  GSPAKQAAPMAMEAGNRRAGAHTAFGSGAGNPSMTLRNLILSPIKRPQLSRRPQMFT

SwissProt top hits

e value

%identity

Alignment

F4HRI2 E3 ubiquitin-protein ligase CCNB1IP1 homolog

4.9e-96

72.52

Show/hide

Query:  RGLMKPVDINPNDEWTNTAMAGISPQTLMKSAYRSVMFYIGQKELEMQYKMNRLMAQCRQKCEVMQEKFTEKLEQVHAAYQKMAKRCQMMEREMENLSKD
        + LMKPVDINPN+EW N AMAGISPQ LMKSAYRSVMFYI Q++LEMQYKMNR++AQCRQKCE MQ KF+EK+EQVH AYQKM KRCQMME+E+ENL+KD
Subjt:  RGLMKPVDINPNDEWTNTAMAGISPQTLMKSAYRSVMFYIGQKELEMQYKMNRLMAQCRQKCEVMQEKFTEKLEQVHAAYQKMAKRCQMMEREMENLSKD

Query:  KQELQEKFAEKSRQKRKLDEMYDQLRNEHESLKRSAIQPVSNFYPRN-EPDLFSNP-VNLMDNREPMRKDWVVSAPETPGPREEIWPTRQNSGNSGHFDI
        KQELQEKF+EKSRQKRKLDEMYDQLR+E+ES+KR+AIQP +NFYPR+ EPD FSNP VN+M+NRE +RKD    +P TPGP++EIWP RQNS NSG FDI
Subjt:  KQELQEKFAEKSRQKRKLDEMYDQLRNEHESLKRSAIQPVSNFYPRN-EPDLFSNP-VNLMDNREPMRKDWVVSAPETPGPREEIWPTRQNSGNSGHFDI

Query:  SVGSPAKQAAPMAMEAGNRRAG-AHTAF-GSGAGNPSMTLRNLILSPIKRPQLSR-RPQMFT
        S  SPA     +  + GNRRAG  H  + G G  NP  TLRNLILSPIKR QLSR RPQ+FT
Subjt:  SVGSPAKQAAPMAMEAGNRRAG-AHTAF-GSGAGNPSMTLRNLILSPIKRPQLSR-RPQMFT

I6PL68 E3 ubiquitin-protein ligase CCNB1IP1 homolog

8.4e-88

67.32

Show/hide

Query:  MKPVDINPNDEWTNTAMAGISPQTLMKSAYRSVMFYIGQKELEMQYKMNRLMAQCRQKCEVMQEKFTEKLEQVHAAYQKMAKRCQMMEREMENLSKDKQE
        M+PVD NPND+WTN +MAG+SPQ LMKSAYRSVMFYIGQKELEMQYKMNR++ QCRQKCE+MQ KFTEKLE+VH AYQKMAK+CQ+ME+E+ENLS+DKQE
Subjt:  MKPVDINPNDEWTNTAMAGISPQTLMKSAYRSVMFYIGQKELEMQYKMNRLMAQCRQKCEVMQEKFTEKLEQVHAAYQKMAKRCQMMEREMENLSKDKQE

Query:  LQEKFAEKSRQKRKLDEMYDQLRNEHESLKRSAIQPVSNFYPRNEPDLFSNPVNLMDNREPMRKDWVVSAPETPGPREEIW--PTRQNSGNSGHFDISVG
        LQEKFAEKSRQKRKLDEMYDQLR+E+ES KRSAIQP +N++PR +PDLFS   N+MD+ +P+R+  +   PETPG R+E W  P RQ    SG F++S G
Subjt:  LQEKFAEKSRQKRKLDEMYDQLRNEHESLKRSAIQPVSNFYPRNEPDLFSNPVNLMDNREPMRKDWVVSAPETPGPREEIW--PTRQNSGNSGHFDISVG

Query:  SPAKQAAPMAMEAGNRRAGAHTAFGSGAGNPSMTLRNLILSPIKRPQLSR-RPQMFT
        SPA  AAP        R  A   FG+   N S  LRN+I+SP+KRPQLSR RP MFT
Subjt:  SPAKQAAPMAMEAGNRRAGAHTAFGSGAGNPSMTLRNLILSPIKRPQLSR-RPQMFT

Arabidopsis top hits

e value

%identity

Alignment

AT1G53490.1 RING/U-box superfamily protein

3.5e-97

72.52

Show/hide

Query:  RGLMKPVDINPNDEWTNTAMAGISPQTLMKSAYRSVMFYIGQKELEMQYKMNRLMAQCRQKCEVMQEKFTEKLEQVHAAYQKMAKRCQMMEREMENLSKD
        + LMKPVDINPN+EW N AMAGISPQ LMKSAYRSVMFYI Q++LEMQYKMNR++AQCRQKCE MQ KF+EK+EQVH AYQKM KRCQMME+E+ENL+KD
Subjt:  RGLMKPVDINPNDEWTNTAMAGISPQTLMKSAYRSVMFYIGQKELEMQYKMNRLMAQCRQKCEVMQEKFTEKLEQVHAAYQKMAKRCQMMEREMENLSKD

Query:  KQELQEKFAEKSRQKRKLDEMYDQLRNEHESLKRSAIQPVSNFYPRN-EPDLFSNP-VNLMDNREPMRKDWVVSAPETPGPREEIWPTRQNSGNSGHFDI
        KQELQEKF+EKSRQKRKLDEMYDQLR+E+ES+KR+AIQP +NFYPR+ EPD FSNP VN+M+NRE +RKD    +P TPGP++EIWP RQNS NSG FDI
Subjt:  KQELQEKFAEKSRQKRKLDEMYDQLRNEHESLKRSAIQPVSNFYPRN-EPDLFSNP-VNLMDNREPMRKDWVVSAPETPGPREEIWPTRQNSGNSGHFDI

Query:  SVGSPAKQAAPMAMEAGNRRAG-AHTAF-GSGAGNPSMTLRNLILSPIKRPQLSR-RPQMFT
        S  SPA     +  + GNRRAG  H  + G G  NP  TLRNLILSPIKR QLSR RPQ+FT
Subjt:  SVGSPAKQAAPMAMEAGNRRAG-AHTAF-GSGAGNPSMTLRNLILSPIKRPQLSR-RPQMFT

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGCTATTTGCTGAATTTTTTGGACTAGATGGATCTTTGAGAACTGAGCACAAGAAACACCAGGGTATGACGACCCTCCTCTGTATGATTTTCACTACAGGGTCTATGAT
TTCCCTAGCATTCCATGGAGTTAGAGGCCTCATGAAACCTGTGGACATCAATCCAAATGATGAATGGACAAATACAGCCATGGCTGGCATATCTCCTCAGACATTGATGA
AAAGTGCATATAGAAGTGTAATGTTCTATATTGGACAAAAGGAATTGGAGATGCAATACAAGATGAACAGACTCATGGCGCAATGCCGACAGAAATGTGAGGTAATGCAA
GAAAAGTTTACTGAGAAACTAGAGCAGGTACATGCTGCATACCAAAAAATGGCCAAGAGATGCCAGATGATGGAGCGAGAAATGGAGAATTTATCCAAAGACAAACAAGA
GCTACAAGAGAAGTTTGCTGAAAAATCCAGGCAGAAGAGGAAACTAGATGAAATGTATGATCAATTGAGGAATGAGCATGAATCACTAAAACGTTCGGCGATCCAGCCCG
TGAGCAATTTTTATCCAAGAAATGAGCCTGATTTGTTCTCAAACCCTGTTAATTTGATGGATAACAGAGAACCCATGAGGAAAGACTGGGTGGTTTCTGCTCCTGAAACT
CCAGGACCAAGAGAAGAAATATGGCCAACAAGACAGAACAGCGGGAACTCTGGTCACTTCGACATCTCCGTTGGGTCACCGGCAAAACAAGCTGCTCCAATGGCAATGGA
AGCTGGGAACAGAAGAGCTGGAGCTCACACTGCGTTTGGAAGTGGAGCTGGAAACCCCTCCATGACTCTACGAAATTTGATTCTGTCCCCAATCAAACGACCTCAGCTCT
CTCGTCGCCCTCAAATGTTCACGTAA

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

MLFAEFFGLDGSLRTEHKKHQGMTTLLCMIFTTGSMISLAFHGVRGLMKPVDINPNDEWTNTAMAGISPQTLMKSAYRSVMFYIGQKELEMQYKMNRLMAQCRQKCEVMQ
EKFTEKLEQVHAAYQKMAKRCQMMEREMENLSKDKQELQEKFAEKSRQKRKLDEMYDQLRNEHESLKRSAIQPVSNFYPRNEPDLFSNPVNLMDNREPMRKDWVVSAPET
PGPREEIWPTRQNSGNSGHFDISVGSPAKQAAPMAMEAGNRRAGAHTAFGSGAGNPSMTLRNLILSPIKRPQLSRRPQMFT

HG10002054 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome