CuGenDBv2

Gene ID	HG10002080
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages;
Genome location	Chr11:3160172..3160459
RNA-Seq Expression	HG10002080
Synteny	HG10002080
Gene Ontology terms	GO:0016021 - integral component of membrane (cellular component)
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6577794.1 putative protein phosphatase 2C 60, partial [Cucurbita argyrosperma subsp. sororia]

1.5e-32

84.62

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Query:  MVINKSLRIRLYGLAFTVMISLPLQIIFLGLSALWRPDQPAYSVVSLVVFFSTFLCAAAGEGILVIVPIADSLAAGGDSRWEDSGQLLKTA
        MVINKSLR+R+Y LA T++ISLPLQIIFLGLSALW PDQPAYSVV+LVVFF+TFLCAAAGEGILVIVPIADSLAAG DS WEDSG+ LK A
Subjt:  MVINKSLRIRLYGLAFTVMISLPLQIIFLGLSALWRPDQPAYSVVSLVVFFSTFLCAAAGEGILVIVPIADSLAAGGDSRWEDSGQLLKTA

KAG7015832.1 hypothetical protein SDJN02_23470, partial [Cucurbita argyrosperma subsp. argyrosperma]

1.5e-32

84.62

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Query:  MVINKSLRIRLYGLAFTVMISLPLQIIFLGLSALWRPDQPAYSVVSLVVFFSTFLCAAAGEGILVIVPIADSLAAGGDSRWEDSGQLLKTA
        MVINKSLR+R+Y LA T++ISLPLQIIFLGLSALW PDQPAYSVV+LVVFF+TFLCAAAGEGILVIVPIADSLAAG DS WEDSG+ LK A
Subjt:  MVINKSLRIRLYGLAFTVMISLPLQIIFLGLSALWRPDQPAYSVVSLVVFFSTFLCAAAGEGILVIVPIADSLAAGGDSRWEDSGQLLKTA

KGN53609.1 hypothetical protein Csa_014834 [Cucumis sativus]

1.4e-30

85.71

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Query:  MVINKSLRIRLYGLAFTVMISLPLQIIFLGLSALWRPDQPAYSVVSLVVFFSTFLCAAAGEGILVIVPIADSLAAGGDSRWEDSGQLLKTA
        MVINKSLRIRLY LAFTVMISLPLQIIFLGLSALWRPDQP YS++SL+VF S FLCA AGEGILVIVPIADSLAA GDS +EDSG  LKTA
Subjt:  MVINKSLRIRLYGLAFTVMISLPLQIIFLGLSALWRPDQPAYSVVSLVVFFSTFLCAAAGEGILVIVPIADSLAAGGDSRWEDSGQLLKTA

TYK19555.1 hypothetical protein E5676_scaffold416G00530 [Cucumis melo var. makuwa]

3.0e-28

82.42

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Query:  MVINKSLRIRLYGLAFTVMISLPLQIIFLGLSALWRPDQPAYSVVSLVVFFSTFLCAAAGEGILVIVPIADSLAAGGDSRWEDSGQLLKTA
        MVINKSLRIRL+ LAFTVMISL LQIIFLGLSALWRPD P YS++SL+VF S FLCA AGEGILVIVPIADSLAA GDS +EDSG  LKTA
Subjt:  MVINKSLRIRLYGLAFTVMISLPLQIIFLGLSALWRPDQPAYSVVSLVVFFSTFLCAAAGEGILVIVPIADSLAAGGDSRWEDSGQLLKTA

XP_023007612.1 uncharacterized protein LOC111500190 [Cucurbita maxima]

2.3e-33

85.71

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Query:  MVINKSLRIRLYGLAFTVMISLPLQIIFLGLSALWRPDQPAYSVVSLVVFFSTFLCAAAGEGILVIVPIADSLAAGGDSRWEDSGQLLKTA
        MVINKSLR+R+Y LA T++ISLPLQIIFLGLSALW PDQPAYSVV+LVVFF+TFLCAAAGEGILVIVPIADSLAAGGDS WEDSG+ LK A
Subjt:  MVINKSLRIRLYGLAFTVMISLPLQIIFLGLSALWRPDQPAYSVVSLVVFFSTFLCAAAGEGILVIVPIADSLAAGGDSRWEDSGQLLKTA

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KXN9 Uncharacterized protein

6.9e-31

85.71

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Query:  MVINKSLRIRLYGLAFTVMISLPLQIIFLGLSALWRPDQPAYSVVSLVVFFSTFLCAAAGEGILVIVPIADSLAAGGDSRWEDSGQLLKTA
        MVINKSLRIRLY LAFTVMISLPLQIIFLGLSALWRPDQP YS++SL+VF S FLCA AGEGILVIVPIADSLAA GDS +EDSG  LKTA
Subjt:  MVINKSLRIRLYGLAFTVMISLPLQIIFLGLSALWRPDQPAYSVVSLVVFFSTFLCAAAGEGILVIVPIADSLAAGGDSRWEDSGQLLKTA

A0A5A7UZP3 Uncharacterized protein

1.4e-28

82.42

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Query:  MVINKSLRIRLYGLAFTVMISLPLQIIFLGLSALWRPDQPAYSVVSLVVFFSTFLCAAAGEGILVIVPIADSLAAGGDSRWEDSGQLLKTA
        MVINKSLRIRL+ LAFTVMISL LQIIFLGLSALWRPD P YS++SL+VF S FLCA AGEGILVIVPIADSLAA GDS +EDSG  LKTA
Subjt:  MVINKSLRIRLYGLAFTVMISLPLQIIFLGLSALWRPDQPAYSVVSLVVFFSTFLCAAAGEGILVIVPIADSLAAGGDSRWEDSGQLLKTA

A0A5D3D7N5 Uncharacterized protein

1.4e-28

82.42

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Query:  MVINKSLRIRLYGLAFTVMISLPLQIIFLGLSALWRPDQPAYSVVSLVVFFSTFLCAAAGEGILVIVPIADSLAAGGDSRWEDSGQLLKTA
        MVINKSLRIRL+ LAFTVMISL LQIIFLGLSALWRPD P YS++SL+VF S FLCA AGEGILVIVPIADSLAA GDS +EDSG  LKTA
Subjt:  MVINKSLRIRLYGLAFTVMISLPLQIIFLGLSALWRPDQPAYSVVSLVVFFSTFLCAAAGEGILVIVPIADSLAAGGDSRWEDSGQLLKTA

A0A5N6RIL4 Uncharacterized protein

2.0e-22

71.95

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Query:  MVINKSLRIRLYGLAFTVMISLPLQIIFLGLSALWRPDQPAYSVVSLVVFFSTFLCAAAGEGILVIVPIADSLAAGGD-SRW
        +VINKSLR+R+YGLAFTV+ISLP+QI+ LGLS LW P+ PAY  V+LVVF STFLCA  GEGILVI PI D+LAAGG+  RW
Subjt:  MVINKSLRIRLYGLAFTVMISLPLQIIFLGLSALWRPDQPAYSVVSLVVFFSTFLCAAAGEGILVIVPIADSLAAGGD-SRW

A0A6J1KZ71 uncharacterized protein LOC111500190

1.1e-33

85.71

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Query:  MVINKSLRIRLYGLAFTVMISLPLQIIFLGLSALWRPDQPAYSVVSLVVFFSTFLCAAAGEGILVIVPIADSLAAGGDSRWEDSGQLLKTA
        MVINKSLR+R+Y LA T++ISLPLQIIFLGLSALW PDQPAYSVV+LVVFF+TFLCAAAGEGILVIVPIADSLAAGGDS WEDSG+ LK A
Subjt:  MVINKSLRIRLYGLAFTVMISLPLQIIFLGLSALWRPDQPAYSVVSLVVFFSTFLCAAAGEGILVIVPIADSLAAGGDSRWEDSGQLLKTA

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT1G57680.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Uncharacterised conserved protein UCP031277 (InterPro:IPR016971); Has 70 Blast hits to 70 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 66; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink).

3.4e-06

38.96

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Query:  MVINKSLRIRLYGLAFTVMISLPLQIIFLGLSALWRPDQPAYSVVSLVVFFSTFLCAAAGEGILVIVPIADSLAAGG
        +VINK L+ R+Y L F+V   LPL+I+ L LS L   D+  +  +S + F S F        +LV  P++DS+A  G
Subjt:  MVINKSLRIRLYGLAFTVMISLPLQIIFLGLSALWRPDQPAYSVVSLVVFFSTFLCAAAGEGILVIVPIADSLAAGG

AT1G57680.2 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Uncharacterised conserved protein UCP031277 (InterPro:IPR016971); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).

3.4e-06

38.96

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Query:  MVINKSLRIRLYGLAFTVMISLPLQIIFLGLSALWRPDQPAYSVVSLVVFFSTFLCAAAGEGILVIVPIADSLAAGG
        +VINK L+ R+Y L F+V   LPL+I+ L LS L   D+  +  +S + F S F        +LV  P++DS+A  G
Subjt:  MVINKSLRIRLYGLAFTVMISLPLQIIFLGLSALWRPDQPAYSVVSLVVFFSTFLCAAAGEGILVIVPIADSLAAGG

Sequences

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CDS sequence

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ATGGTCATCAATAAGTCTCTTCGGATTCGTCTTTACGGCCTCGCTTTCACCGTCATGATTTCCTTGCCCTTGCAGATTATATTCCTCGGCCTCTCCGCGCTCTGGAGGCC
GGACCAGCCCGCTTATTCCGTCGTTTCGCTGGTTGTCTTTTTTAGTACGTTTCTATGCGCCGCTGCTGGGGAAGGCATTTTGGTCATTGTTCCCATCGCTGATTCCTTGG
CCGCCGGTGGAGACTCTCGGTGGGAAGATTCTGGTCAGCTTTTGAAGACCGCCGCGGCCGACGGTTGA

mRNA sequence

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Protein sequence

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MVINKSLRIRLYGLAFTVMISLPLQIIFLGLSALWRPDQPAYSVVSLVVFFSTFLCAAAGEGILVIVPIADSLAAGGDSRWEDSGQLLKTAAADG

HG10002080 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome