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HG10002102 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10002102
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionEukaryotic translation initiation factor 2A
Genome locationChr11:3390048..3390259
RNA-Seq ExpressionHG10002102
SyntenyHG10002102
Gene Ontology termsGO:0006413 - translational initiation (biological process)
GO:0006417 - regulation of translation (biological process)
GO:0022627 - cytosolic small ribosomal subunit (cellular component)
GO:0000049 - tRNA binding (molecular function)
GO:0003729 - mRNA binding (molecular function)
GO:0003743 - translation initiation factor activity (molecular function)
GO:0043022 - ribosome binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8649094.1 hypothetical protein Csa_015000 [Cucumis sativus]8.6e-0992.5Show/hide
Query:  QLLGEGPKETLSKNALRNKKKREKQKEKKAGEAASTANDV
        +LLGEGPKETLSKNA+RNKKKREKQKEKKAGEAAS+ANDV
Subjt:  QLLGEGPKETLSKNALRNKKKREKQKEKKAGEAASTANDV
XP_008454042.1 PREDICTED: eukaryotic translation initiation factor 2A [Cucumis melo]8.6e-0992.5Show/hide
Query:  QLLGEGPKETLSKNALRNKKKREKQKEKKAGEAASTANDV
        +LLGEGPKETLSKNA+RNKKKREKQKEKKAGEAAS+ANDV
Subjt:  QLLGEGPKETLSKNALRNKKKREKQKEKKAGEAASTANDV
XP_011653038.1 eukaryotic translation initiation factor 2A [Cucumis sativus]8.6e-0992.5Show/hide
Query:  QLLGEGPKETLSKNALRNKKKREKQKEKKAGEAASTANDV
        +LLGEGPKETLSKNA+RNKKKREKQKEKKAGEAAS+ANDV
Subjt:  QLLGEGPKETLSKNALRNKKKREKQKEKKAGEAASTANDV
XP_022955944.1 eukaryotic translation initiation factor 2A [Cucurbita moschata]4.7e-0792.5Show/hide
Query:  QLLGEGPKETLSKNALRNKKKREKQKEKKAGEAASTANDV
        +LLGEGPKE LSKNALRNKKKREKQKEKKAGE ASTANDV
Subjt:  QLLGEGPKETLSKNALRNKKKREKQKEKKAGEAASTANDV
XP_038877052.1 eukaryotic translation initiation factor 2A [Benincasa hispida]1.7e-0997.5Show/hide
Query:  QLLGEGPKETLSKNALRNKKKREKQKEKKAGEAASTANDV
        +LLGEGPKETLSKNALRNKKKREKQKEKKAGEAASTANDV
Subjt:  QLLGEGPKETLSKNALRNKKKREKQKEKKAGEAASTANDV
TrEMBL top hitse value%identityAlignment
A0A0A0KXB3 Eukaryotic translation initiation factor 2A4.2e-0992.5Show/hide
Query:  QLLGEGPKETLSKNALRNKKKREKQKEKKAGEAASTANDV
        +LLGEGPKETLSKNA+RNKKKREKQKEKKAGEAAS+ANDV
Subjt:  QLLGEGPKETLSKNALRNKKKREKQKEKKAGEAASTANDV
A0A1S3BXP8 Eukaryotic translation initiation factor 2A4.2e-0992.5Show/hide
Query:  QLLGEGPKETLSKNALRNKKKREKQKEKKAGEAASTANDV
        +LLGEGPKETLSKNA+RNKKKREKQKEKKAGEAAS+ANDV
Subjt:  QLLGEGPKETLSKNALRNKKKREKQKEKKAGEAASTANDV
A0A5A7TMY6 Eukaryotic translation initiation factor 2A4.2e-0992.5Show/hide
Query:  QLLGEGPKETLSKNALRNKKKREKQKEKKAGEAASTANDV
        +LLGEGPKETLSKNA+RNKKKREKQKEKKAGEAAS+ANDV
Subjt:  QLLGEGPKETLSKNALRNKKKREKQKEKKAGEAASTANDV
A0A6J1GXP1 Eukaryotic translation initiation factor 2A2.3e-0792.5Show/hide
Query:  QLLGEGPKETLSKNALRNKKKREKQKEKKAGEAASTANDV
        +LLGEGPKE LSKNALRNKKKREKQKEKKAGE ASTANDV
Subjt:  QLLGEGPKETLSKNALRNKKKREKQKEKKAGEAASTANDV
A0A6J1INR1 Eukaryotic translation initiation factor 2A6.7e-0790Show/hide
Query:  QLLGEGPKETLSKNALRNKKKREKQKEKKAGEAASTANDV
        +LLGEGPKE LSKNALRNKKKREKQKEKKAGE AST NDV
Subjt:  QLLGEGPKETLSKNALRNKKKREKQKEKKAGEAASTANDV
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAGTTGCTTGGAGAAGGCCCTAAAGAAACACTGAGTAAGAACGCCCTACGGAACAAGAAGAAAAGGGAGAAACAAAAGGAGAAGAAGGCGGGGGAAGCTGCTTCAAC
AGCCAATGATGTGTGA
mRNA sequenceShow/hide mRNA sequence
ATGCAGTTGCTTGGAGAAGGCCCTAAAGAAACACTGAGTAAGAACGCCCTACGGAACAAGAAGAAAAGGGAGAAACAAAAGGAGAAGAAGGCGGGGGAAGCTGCTTCAAC
AGCCAATGATGTGTGA
Protein sequenceShow/hide protein sequence
MQLLGEGPKETLSKNALRNKKKREKQKEKKAGEAASTANDV