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HG10002116 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10002116
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionTransmembrane protein
Genome locationChr11:3568423..3568932
RNA-Seq ExpressionHG10002116
SyntenyHG10002116
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8649089.1 hypothetical protein Csa_014602 [Cucumis sativus]4.9e-7488.96Show/hide
Query:  MGISASKRVRNSLTNSPEFDSACNSTFSHCLALTQHAYDGVFPYQLCAAADHLHHLLTVVRPHPLIVNWLPSPPTRLQVDSALRAVNRDDSDREGETLGP
        MGISASKRVRNSLTNS EFDSACNSTFSHCLALTQHAY+GVFPYQLC AADHLHHLLTVV+PHPLI NWLPSPPTRLQVDSALRAVNRDDSDRE E LG 
Subjt:  MGISASKRVRNSLTNSPEFDSACNSTFSHCLALTQHAYDGVFPYQLCAAADHLHHLLTVVRPHPLIVNWLPSPPTRLQVDSALRAVNRDDSDREGETLGP

Query:  IRFKHWALELFAEAVAKNVGKKVMLRVPVGIAGIAGIGAVTRSGKDVVGSVVVLYALGVATSV
        I F  WA+ELFAEAV KNVGKKVM+RVPVGIAGIAGIGAVTRSGKDVVG+VV +YALGVATS+
Subjt:  IRFKHWALELFAEAVAKNVGKKVMLRVPVGIAGIAGIGAVTRSGKDVVGSVVVLYALGVATSV

XP_004152139.2 uncharacterized protein LOC101220555 [Cucumis sativus]1.8e-7689.82Show/hide
Query:  MGISASKRVRNSLTNSPEFDSACNSTFSHCLALTQHAYDGVFPYQLCAAADHLHHLLTVVRPHPLIVNWLPSPPTRLQVDSALRAVNRDDSDREGETLGP
        MGISASKRVRNSLTNS EFDSACNSTFSHCLALTQHAY+GVFPYQLC AADHLHHLLTVV+PHPLI NWLPSPPTRLQVDSALRAVNRDDSDRE E LG 
Subjt:  MGISASKRVRNSLTNSPEFDSACNSTFSHCLALTQHAYDGVFPYQLCAAADHLHHLLTVVRPHPLIVNWLPSPPTRLQVDSALRAVNRDDSDREGETLGP

Query:  IRFKHWALELFAEAVAKNVGKKVMLRVPVGIAGIAGIGAVTRSGKDVVGSVVVLYALGVATSVYLSL
        I F  WA+ELFAEAV KNVGKKVM+RVPVGIAGIAGIGAVTRSGKDVVG+VV +YALGVATSVYLSL
Subjt:  IRFKHWALELFAEAVAKNVGKKVMLRVPVGIAGIAGIGAVTRSGKDVVGSVVVLYALGVATSVYLSL

XP_008454080.1 PREDICTED: uncharacterized protein LOC103494601 [Cucumis melo]3.3e-7889.82Show/hide
Query:  MGISASKRVRNSLTNSPEFDSACNSTFSHCLALTQHAYDGVFPYQLCAAADHLHHLLTVVRPHPLIVNWLPSPPTRLQVDSALRAVNRDDSDREGETLGP
        MG+SASKRVRNSLTNSPEFDSACNSTFSHCLALTQHAY+GVFPYQLC AADHLHHLLTVV+PHPLI NWLPSPPTRLQVDSALRAVNRDDSD EGETLG 
Subjt:  MGISASKRVRNSLTNSPEFDSACNSTFSHCLALTQHAYDGVFPYQLCAAADHLHHLLTVVRPHPLIVNWLPSPPTRLQVDSALRAVNRDDSDREGETLGP

Query:  IRFKHWALELFAEAVAKNVGKKVMLRVPVGIAGIAGIGAVTRSGKDVVGSVVVLYALGVATSVYLSL
        IRF+ WA+ELFAEAV KNVGKKVM+RVP+GIAGIAGIGAVTRSGKDVVG+VV +YALGVATS+YLSL
Subjt:  IRFKHWALELFAEAVAKNVGKKVMLRVPVGIAGIAGIGAVTRSGKDVVGSVVVLYALGVATSVYLSL

XP_022932745.1 uncharacterized protein LOC111439202 [Cucurbita moschata]6.6e-7183.33Show/hide
Query:  MGISASKRVRNSLTNSPEFDSACNSTFSHCLALTQHAYDGVFPYQLCAAADHLHHLLTVVRPHPLIVNWLPSPPTRLQVDSALRAVNRDDSDREG-ETLG
        MGISASKRVRNSL+NSP+FDSAC+STFSHCL LTQHAY GVFPYQLC AADHLH LLT VRPHPLI  WLPSPPTR QVDSALRAVNR+D+DRE  ETLG
Subjt:  MGISASKRVRNSLTNSPEFDSACNSTFSHCLALTQHAYDGVFPYQLCAAADHLHHLLTVVRPHPLIVNWLPSPPTRLQVDSALRAVNRDDSDREG-ETLG

Query:  PIRFKHWALELFAEAVAKNVGKKVMLRVPVGIAGIAGIGAVTRSGKDVVGSVVVLYALGVATSVYLSL
        PIRFK WA+ELFAEAV KNV K+VM RVPVGIAGIAGIGAVTRSGKD+VG++V +YALGVATS+YL L
Subjt:  PIRFKHWALELFAEAVAKNVGKKVMLRVPVGIAGIAGIGAVTRSGKDVVGSVVVLYALGVATSVYLSL

XP_038878178.1 uncharacterized protein LOC120070324 [Benincasa hispida]1.3e-8295.21Show/hide
Query:  MGISASKRVRNSLTNSPEFDSACNSTFSHCLALTQHAYDGVFPYQLCAAADHLHHLLTVVRPHPLIVNWLPSPPTRLQVDSALRAVNRDDSDREGETLGP
        MGISASKRVRNSLTNS EFD ACNSTFSHCLALTQHAYDGVFPYQLCAAADHLHHL+TVVRPHPLI NWLPSPPTRLQVDSALRAVNRDDSDREGETLGP
Subjt:  MGISASKRVRNSLTNSPEFDSACNSTFSHCLALTQHAYDGVFPYQLCAAADHLHHLLTVVRPHPLIVNWLPSPPTRLQVDSALRAVNRDDSDREGETLGP

Query:  IRFKHWALELFAEAVAKNVGKKVMLRVPVGIAGIAGIGAVTRSGKDVVGSVVVLYALGVATSVYLSL
        IRFKHWA+ELFAEAVAKNVGKKVMLRVPVGIAGIAGIGAVTRSGKDVVG+VV +YALGVATSVYLSL
Subjt:  IRFKHWALELFAEAVAKNVGKKVMLRVPVGIAGIAGIGAVTRSGKDVVGSVVVLYALGVATSVYLSL

TrEMBL top hitse value%identityAlignment
A0A0A0KVZ1 Uncharacterized protein8.7e-7789.82Show/hide
Query:  MGISASKRVRNSLTNSPEFDSACNSTFSHCLALTQHAYDGVFPYQLCAAADHLHHLLTVVRPHPLIVNWLPSPPTRLQVDSALRAVNRDDSDREGETLGP
        MGISASKRVRNSLTNS EFDSACNSTFSHCLALTQHAY+GVFPYQLC AADHLHHLLTVV+PHPLI NWLPSPPTRLQVDSALRAVNRDDSDRE E LG 
Subjt:  MGISASKRVRNSLTNSPEFDSACNSTFSHCLALTQHAYDGVFPYQLCAAADHLHHLLTVVRPHPLIVNWLPSPPTRLQVDSALRAVNRDDSDREGETLGP

Query:  IRFKHWALELFAEAVAKNVGKKVMLRVPVGIAGIAGIGAVTRSGKDVVGSVVVLYALGVATSVYLSL
        I F  WA+ELFAEAV KNVGKKVM+RVPVGIAGIAGIGAVTRSGKDVVG+VV +YALGVATSVYLSL
Subjt:  IRFKHWALELFAEAVAKNVGKKVMLRVPVGIAGIAGIGAVTRSGKDVVGSVVVLYALGVATSVYLSL

A0A1S3BXX1 uncharacterized protein LOC1034946011.6e-7889.82Show/hide
Query:  MGISASKRVRNSLTNSPEFDSACNSTFSHCLALTQHAYDGVFPYQLCAAADHLHHLLTVVRPHPLIVNWLPSPPTRLQVDSALRAVNRDDSDREGETLGP
        MG+SASKRVRNSLTNSPEFDSACNSTFSHCLALTQHAY+GVFPYQLC AADHLHHLLTVV+PHPLI NWLPSPPTRLQVDSALRAVNRDDSD EGETLG 
Subjt:  MGISASKRVRNSLTNSPEFDSACNSTFSHCLALTQHAYDGVFPYQLCAAADHLHHLLTVVRPHPLIVNWLPSPPTRLQVDSALRAVNRDDSDREGETLGP

Query:  IRFKHWALELFAEAVAKNVGKKVMLRVPVGIAGIAGIGAVTRSGKDVVGSVVVLYALGVATSVYLSL
        IRF+ WA+ELFAEAV KNVGKKVM+RVP+GIAGIAGIGAVTRSGKDVVG+VV +YALGVATS+YLSL
Subjt:  IRFKHWALELFAEAVAKNVGKKVMLRVPVGIAGIAGIGAVTRSGKDVVGSVVVLYALGVATSVYLSL

A0A5D3D2N6 Uncharacterized protein1.6e-7889.82Show/hide
Query:  MGISASKRVRNSLTNSPEFDSACNSTFSHCLALTQHAYDGVFPYQLCAAADHLHHLLTVVRPHPLIVNWLPSPPTRLQVDSALRAVNRDDSDREGETLGP
        MG+SASKRVRNSLTNSPEFDSACNSTFSHCLALTQHAY+GVFPYQLC AADHLHHLLTVV+PHPLI NWLPSPPTRLQVDSALRAVNRDDSD EGETLG 
Subjt:  MGISASKRVRNSLTNSPEFDSACNSTFSHCLALTQHAYDGVFPYQLCAAADHLHHLLTVVRPHPLIVNWLPSPPTRLQVDSALRAVNRDDSDREGETLGP

Query:  IRFKHWALELFAEAVAKNVGKKVMLRVPVGIAGIAGIGAVTRSGKDVVGSVVVLYALGVATSVYLSL
        IRF+ WA+ELFAEAV KNVGKKVM+RVP+GIAGIAGIGAVTRSGKDVVG+VV +YALGVATS+YLSL
Subjt:  IRFKHWALELFAEAVAKNVGKKVMLRVPVGIAGIAGIGAVTRSGKDVVGSVVVLYALGVATSVYLSL

A0A6J1F2Z4 uncharacterized protein LOC1114392023.2e-7183.33Show/hide
Query:  MGISASKRVRNSLTNSPEFDSACNSTFSHCLALTQHAYDGVFPYQLCAAADHLHHLLTVVRPHPLIVNWLPSPPTRLQVDSALRAVNRDDSDREG-ETLG
        MGISASKRVRNSL+NSP+FDSAC+STFSHCL LTQHAY GVFPYQLC AADHLH LLT VRPHPLI  WLPSPPTR QVDSALRAVNR+D+DRE  ETLG
Subjt:  MGISASKRVRNSLTNSPEFDSACNSTFSHCLALTQHAYDGVFPYQLCAAADHLHHLLTVVRPHPLIVNWLPSPPTRLQVDSALRAVNRDDSDREG-ETLG

Query:  PIRFKHWALELFAEAVAKNVGKKVMLRVPVGIAGIAGIGAVTRSGKDVVGSVVVLYALGVATSVYLSL
        PIRFK WA+ELFAEAV KNV K+VM RVPVGIAGIAGIGAVTRSGKD+VG++V +YALGVATS+YL L
Subjt:  PIRFKHWALELFAEAVAKNVGKKVMLRVPVGIAGIAGIGAVTRSGKDVVGSVVVLYALGVATSVYLSL

A0A6J1I3X0 uncharacterized protein LOC1114707525.4e-7183.33Show/hide
Query:  MGISASKRVRNSLTNSPEFDSACNSTFSHCLALTQHAYDGVFPYQLCAAADHLHHLLTVVRPHPLIVNWLPSPPTRLQVDSALRAVNRDDSDREG-ETLG
        MGISASKRV+NSL+NSP+FDSAC+STFSHCL LTQHAY GVFPYQLC AADHLH LLT VRPHPLI  WLPSPPTRLQVDSAL+AVNR D+ RE  ETLG
Subjt:  MGISASKRVRNSLTNSPEFDSACNSTFSHCLALTQHAYDGVFPYQLCAAADHLHHLLTVVRPHPLIVNWLPSPPTRLQVDSALRAVNRDDSDREG-ETLG

Query:  PIRFKHWALELFAEAVAKNVGKKVMLRVPVGIAGIAGIGAVTRSGKDVVGSVVVLYALGVATSVYLSL
        PIRFKHWA+ELFAEAV KNV K+VM RVPVGIAGIAGIGAVTRSGKD+VGS+V +YALGVATS+YL L
Subjt:  PIRFKHWALELFAEAVAKNVGKKVMLRVPVGIAGIAGIGAVTRSGKDVVGSVVVLYALGVATSVYLSL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G43540.1 unknown protein6.6e-4557.14Show/hide
Query:  MGISASKRVRNSLTNSPEFDSACNSTFSHCLALTQHAYDGVFPYQLCAAADHLHHLLTVVRPHPLIVNWLPSPPTRLQVDSALR-AVNRDDSDREGETLG
        MGIS SKRV   L+NSPEFDSAC+S +   L+L QHA+ GV PYQL +AA H+H  L+ +R  PLI  WL SPP++ QVDSALR  V+R  +  E E LG
Subjt:  MGISASKRVRNSLTNSPEFDSACNSTFSHCLALTQHAYDGVFPYQLCAAADHLHHLLTVVRPHPLIVNWLPSPPTRLQVDSALR-AVNRDDSDREGETLG

Query:  PIRFKHWALELFAEAVAKNVGKKVMLRVPVGIAGIAGIGAVTRSGKDVVGSVVVLYALGVATSVYLSL
           FK WA+E+FAEAV  N  K +  R+P+GI GI GIGAVTRSG++++G+ + +YA+GVATSV+LSL
Subjt:  PIRFKHWALELFAEAVAKNVGKKVMLRVPVGIAGIAGIGAVTRSGKDVVGSVVVLYALGVATSVYLSL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAATATCCGCCTCAAAACGAGTCAGAAACTCACTTACCAACTCGCCCGAATTTGACTCAGCCTGCAATTCAACCTTCTCTCACTGCCTTGCCCTAACGCAGCACGC
ATACGACGGCGTTTTCCCCTACCAACTCTGCGCCGCCGCCGACCACCTTCACCACCTCCTCACCGTCGTCCGGCCGCATCCACTAATCGTCAACTGGCTTCCCTCTCCCC
CGACTCGCCTCCAGGTGGACTCAGCGCTCCGAGCCGTCAATCGCGATGACTCGGACCGTGAAGGCGAAACCCTAGGCCCGATCCGCTTCAAGCATTGGGCGCTCGAATTA
TTCGCAGAGGCTGTGGCGAAGAACGTCGGAAAAAAAGTGATGCTCCGAGTTCCGGTTGGAATTGCCGGAATCGCCGGAATCGGCGCCGTGACTCGGTCCGGAAAGGATGT
GGTTGGAAGTGTGGTTGTACTGTACGCGCTCGGCGTTGCGACTTCGGTATATCTCAGTTTGTATGTATAG
mRNA sequenceShow/hide mRNA sequence
ATGGGAATATCCGCCTCAAAACGAGTCAGAAACTCACTTACCAACTCGCCCGAATTTGACTCAGCCTGCAATTCAACCTTCTCTCACTGCCTTGCCCTAACGCAGCACGC
ATACGACGGCGTTTTCCCCTACCAACTCTGCGCCGCCGCCGACCACCTTCACCACCTCCTCACCGTCGTCCGGCCGCATCCACTAATCGTCAACTGGCTTCCCTCTCCCC
CGACTCGCCTCCAGGTGGACTCAGCGCTCCGAGCCGTCAATCGCGATGACTCGGACCGTGAAGGCGAAACCCTAGGCCCGATCCGCTTCAAGCATTGGGCGCTCGAATTA
TTCGCAGAGGCTGTGGCGAAGAACGTCGGAAAAAAAGTGATGCTCCGAGTTCCGGTTGGAATTGCCGGAATCGCCGGAATCGGCGCCGTGACTCGGTCCGGAAAGGATGT
GGTTGGAAGTGTGGTTGTACTGTACGCGCTCGGCGTTGCGACTTCGGTATATCTCAGTTTGTATGTATAG
Protein sequenceShow/hide protein sequence
MGISASKRVRNSLTNSPEFDSACNSTFSHCLALTQHAYDGVFPYQLCAAADHLHHLLTVVRPHPLIVNWLPSPPTRLQVDSALRAVNRDDSDREGETLGPIRFKHWALEL
FAEAVAKNVGKKVMLRVPVGIAGIAGIGAVTRSGKDVVGSVVVLYALGVATSVYLSLYV