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HG10002168 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10002168
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description50S ribosomal protein L1 isoform X1
Genome locationChr11:4142917..4143132
RNA-Seq ExpressionHG10002168
SyntenyHG10002168
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004152169.1 uncharacterized protein LOC101207134 [Cucumis sativus]3.1e-0693.1Show/hide
Query:  MGPGFPITIQSLSKVADQYNRKYLSGMIR
        MGPGFPITIQSLSKVADQYNRKYLSG++R
Subjt:  MGPGFPITIQSLSKVADQYNRKYLSGMIR
XP_008454163.1 PREDICTED: 50S ribosomal protein L1 isoform X1 [Cucumis melo]6.9e-0689.66Show/hide
Query:  MGPGFPITIQSLSKVADQYNRKYLSGMIR
        MGPGFPITIQSLSKVADQYN+KYLSG++R
Subjt:  MGPGFPITIQSLSKVADQYNRKYLSGMIR
XP_022153493.1 uncharacterized protein LOC111020988 [Momordica charantia]3.1e-0693.1Show/hide
Query:  MGPGFPITIQSLSKVADQYNRKYLSGMIR
        MGPGFP+TIQSLSKVADQYNRKYLSG+IR
Subjt:  MGPGFPITIQSLSKVADQYNRKYLSGMIR
XP_023524712.1 uncharacterized protein LOC111788572 [Cucurbita pepo subsp. pepo]3.1e-0689.66Show/hide
Query:  MGPGFPITIQSLSKVADQYNRKYLSGMIR
        MGPGFP+TIQSLSKVADQYN+KYLSGM+R
Subjt:  MGPGFPITIQSLSKVADQYNRKYLSGMIR
XP_038877977.1 50S ribosomal protein L1 [Benincasa hispida]2.4e-0696.55Show/hide
Query:  MGPGFPITIQSLSKVADQYNRKYLSGMIR
        MGPGFPITIQSLSKVADQYNRKYLSG+IR
Subjt:  MGPGFPITIQSLSKVADQYNRKYLSGMIR
TrEMBL top hitse value%identityAlignment
A0A0A0KTS4 Uncharacterized protein1.5e-0693.1Show/hide
Query:  MGPGFPITIQSLSKVADQYNRKYLSGMIR
        MGPGFPITIQSLSKVADQYNRKYLSG++R
Subjt:  MGPGFPITIQSLSKVADQYNRKYLSGMIR
A0A1S3BZ70 50S ribosomal protein L1 isoform X13.4e-0689.66Show/hide
Query:  MGPGFPITIQSLSKVADQYNRKYLSGMIR
        MGPGFPITIQSLSKVADQYN+KYLSG++R
Subjt:  MGPGFPITIQSLSKVADQYNRKYLSGMIR
A0A6J1DHL5 uncharacterized protein LOC1110209881.5e-0693.1Show/hide
Query:  MGPGFPITIQSLSKVADQYNRKYLSGMIR
        MGPGFP+TIQSLSKVADQYNRKYLSG+IR
Subjt:  MGPGFPITIQSLSKVADQYNRKYLSGMIR
A0A6J1G987 uncharacterized protein LOC1114521294.4e-0686.21Show/hide
Query:  MGPGFPITIQSLSKVADQYNRKYLSGMIR
        MGPGFP+TIQSLSKVADQYN+KYLSG++R
Subjt:  MGPGFPITIQSLSKVADQYNRKYLSGMIR
A0A6J1KH98 LOW QUALITY PROTEIN: uncharacterized protein LOC1114932083.4e-0689.66Show/hide
Query:  MGPGFPITIQSLSKVADQYNRKYLSGMIR
        MGPGFPITIQSLSKVADQYN+KYLSG++R
Subjt:  MGPGFPITIQSLSKVADQYNRKYLSGMIR
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAGTGATGGTTGCGGACCTCGTTGATGCATATCTCTTCTATTTGGGATCTTACATCCTCTTATTTGCAACTACTGCATGTCTACTAAATCATGAAGTAATTCATTA
TTCTTGTAATGTGCAGATGGGTCCCGGATTCCCAATTACGATACAATCGTTGTCGAAAGTTGCAGATCAATACAACAGAAAGTACTTAAGCGGCATGATCCGCTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAAGTGATGGTTGCGGACCTCGTTGATGCATATCTCTTCTATTTGGGATCTTACATCCTCTTATTTGCAACTACTGCATGTCTACTAAATCATGAAGTAATTCATTA
TTCTTGTAATGTGCAGATGGGTCCCGGATTCCCAATTACGATACAATCGTTGTCGAAAGTTGCAGATCAATACAACAGAAAGTACTTAAGCGGCATGATCCGCTGA
Protein sequenceShow/hide protein sequence
MEVMVADLVDAYLFYLGSYILLFATTACLLNHEVIHYSCNVQMGPGFPITIQSLSKVADQYNRKYLSGMIR