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HG10002170 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10002170
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionTransmembrane protein
Genome locationChr11:4152851..4153198
RNA-Seq ExpressionHG10002170
SyntenyHG10002170
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0044487.1 putative transmembrane protein [Cucumis melo var. makuwa]1.7e-4991.38Show/hide
Query:  MADDDDPWLAPDKLYHFLLCFTLTILFASLALHTRYPFIRRHSILIGSVVSLFAGAAKEVADELGFFKSAGASTRDAVADLIGVLIASFLLHALRFSIRS
        M +DDDPWLAPDKLYHFLLCF+LTILFAS ALHTRYPFIRRHSILIGSV+SL AGAAKEVADELGFFKSAGASTRDAVADLIGVL+ASFLLHALRFSIRS
Subjt:  MADDDDPWLAPDKLYHFLLCFTLTILFASLALHTRYPFIRRHSILIGSVVSLFAGAAKEVADELGFFKSAGASTRDAVADLIGVLIASFLLHALRFSIRS

Query:  C-GDKEAKPNRDILMV
          GDKEA PNRDILMV
Subjt:  C-GDKEAKPNRDILMV
KAE8649070.1 hypothetical protein Csa_014719 [Cucumis sativus]1.8e-4888.98Show/hide
Query:  MADDDDPWLAPDKLYHFLLCFTLTILFASLALHTRYPFIRRHSILIGSVVSLFAGAAKEVADELGFFKSAGASTRDAVADLIGVLIASFLLHALRFSIRS
        M +DDDPWLAPDK YHFLLCF+LTILFAS ALHTRYPFIRRHSILIGSV+SLFAGAAKEVADELGFFKSAGASTRDAVAD IGVLIASFLLHALRFSIRS
Subjt:  MADDDDPWLAPDKLYHFLLCFTLTILFASLALHTRYPFIRRHSILIGSVVSLFAGAAKEVADELGFFKSAGASTRDAVADLIGVLIASFLLHALRFSIRS

Query:  ---CGDKEAKPNRDILMV
            G KEA PNRDILMV
Subjt:  ---CGDKEAKPNRDILMV
XP_008454165.1 PREDICTED: uncharacterized protein LOC103494650 [Cucumis melo]1.7e-4991.38Show/hide
Query:  MADDDDPWLAPDKLYHFLLCFTLTILFASLALHTRYPFIRRHSILIGSVVSLFAGAAKEVADELGFFKSAGASTRDAVADLIGVLIASFLLHALRFSIRS
        M +DDDPWLAPDKLYHFLLCF+LTILFAS ALHTRYPFIRRHSILIGSV+SL AGAAKEVADELGFFKSAGASTRDAVADLIGVL+ASFLLHALRFSIRS
Subjt:  MADDDDPWLAPDKLYHFLLCFTLTILFASLALHTRYPFIRRHSILIGSVVSLFAGAAKEVADELGFFKSAGASTRDAVADLIGVLIASFLLHALRFSIRS

Query:  C-GDKEAKPNRDILMV
          GDKEA PNRDILMV
Subjt:  C-GDKEAKPNRDILMV
XP_011653000.1 uncharacterized protein LOC105435165 [Cucumis sativus]1.8e-4888.98Show/hide
Query:  MADDDDPWLAPDKLYHFLLCFTLTILFASLALHTRYPFIRRHSILIGSVVSLFAGAAKEVADELGFFKSAGASTRDAVADLIGVLIASFLLHALRFSIRS
        M +DDDPWLAPDK YHFLLCF+LTILFAS ALHTRYPFIRRHSILIGSV+SLFAGAAKEVADELGFFKSAGASTRDAVAD IGVLIASFLLHALRFSIRS
Subjt:  MADDDDPWLAPDKLYHFLLCFTLTILFASLALHTRYPFIRRHSILIGSVVSLFAGAAKEVADELGFFKSAGASTRDAVADLIGVLIASFLLHALRFSIRS

Query:  ---CGDKEAKPNRDILMV
            G KEA PNRDILMV
Subjt:  ---CGDKEAKPNRDILMV
XP_038890690.1 uncharacterized protein LOC120080188 [Benincasa hispida]5.5e-5394.78Show/hide
Query:  MADDDDPWLAPDKLYHFLLCFTLTILFASLALHTRYPFIRRHSILIGSVVSLFAGAAKEVADELGFFKSAGASTRDAVADLIGVLIASFLLHALRFSIRS
        M DDDDPWLAPDKLYHFLLCFTLTILFASLALHTRYPFIRRHSILIGSVVSLFAGAAKEVADELGFFKSAGASTRDA+ADLIGVLIASFLLH LRFSIRS
Subjt:  MADDDDPWLAPDKLYHFLLCFTLTILFASLALHTRYPFIRRHSILIGSVVSLFAGAAKEVADELGFFKSAGASTRDAVADLIGVLIASFLLHALRFSIRS

Query:  CGDKEAKPNRDILMV
         GDKEA P+RDILMV
Subjt:  CGDKEAKPNRDILMV
TrEMBL top hitse value%identityAlignment
A0A0A0KYM1 Uncharacterized protein8.9e-4988.98Show/hide
Query:  MADDDDPWLAPDKLYHFLLCFTLTILFASLALHTRYPFIRRHSILIGSVVSLFAGAAKEVADELGFFKSAGASTRDAVADLIGVLIASFLLHALRFSIRS
        M +DDDPWLAPDK YHFLLCF+LTILFAS ALHTRYPFIRRHSILIGSV+SLFAGAAKEVADELGFFKSAGASTRDAVAD IGVLIASFLLHALRFSIRS
Subjt:  MADDDDPWLAPDKLYHFLLCFTLTILFASLALHTRYPFIRRHSILIGSVVSLFAGAAKEVADELGFFKSAGASTRDAVADLIGVLIASFLLHALRFSIRS

Query:  ---CGDKEAKPNRDILMV
            G KEA PNRDILMV
Subjt:  ---CGDKEAKPNRDILMV
A0A1S3BXG6 uncharacterized protein LOC1034946508.0e-5091.38Show/hide
Query:  MADDDDPWLAPDKLYHFLLCFTLTILFASLALHTRYPFIRRHSILIGSVVSLFAGAAKEVADELGFFKSAGASTRDAVADLIGVLIASFLLHALRFSIRS
        M +DDDPWLAPDKLYHFLLCF+LTILFAS ALHTRYPFIRRHSILIGSV+SL AGAAKEVADELGFFKSAGASTRDAVADLIGVL+ASFLLHALRFSIRS
Subjt:  MADDDDPWLAPDKLYHFLLCFTLTILFASLALHTRYPFIRRHSILIGSVVSLFAGAAKEVADELGFFKSAGASTRDAVADLIGVLIASFLLHALRFSIRS

Query:  C-GDKEAKPNRDILMV
          GDKEA PNRDILMV
Subjt:  C-GDKEAKPNRDILMV
A0A5A7TRK6 Putative transmembrane protein8.0e-5091.38Show/hide
Query:  MADDDDPWLAPDKLYHFLLCFTLTILFASLALHTRYPFIRRHSILIGSVVSLFAGAAKEVADELGFFKSAGASTRDAVADLIGVLIASFLLHALRFSIRS
        M +DDDPWLAPDKLYHFLLCF+LTILFAS ALHTRYPFIRRHSILIGSV+SL AGAAKEVADELGFFKSAGASTRDAVADLIGVL+ASFLLHALRFSIRS
Subjt:  MADDDDPWLAPDKLYHFLLCFTLTILFASLALHTRYPFIRRHSILIGSVVSLFAGAAKEVADELGFFKSAGASTRDAVADLIGVLIASFLLHALRFSIRS

Query:  C-GDKEAKPNRDILMV
          GDKEA PNRDILMV
Subjt:  C-GDKEAKPNRDILMV
A0A6J1G9C8 uncharacterized protein LOC1114521367.5e-4886.09Show/hide
Query:  MADDDDPWLAPDKLYHFLLCFTLTILFASLALHTRYPFIRRHSILIGSVVSLFAGAAKEVADELGFFKSAGASTRDAVADLIGVLIASFLLHALRFSIRS
        M DD+DPW APDKLYHFLLCFTLT+ FA+LA  TRYPFIRRHSI+IGSV+SLFAGAAKEVADELGFFKSAGASTRDAVADL+GVLIASF LHALRFSIR 
Subjt:  MADDDDPWLAPDKLYHFLLCFTLTILFASLALHTRYPFIRRHSILIGSVVSLFAGAAKEVADELGFFKSAGASTRDAVADLIGVLIASFLLHALRFSIRS

Query:  CGDKEAKPNRDILMV
         G KEA PNRDILMV
Subjt:  CGDKEAKPNRDILMV
A0A6J1K872 uncharacterized protein LOC1114925821.1e-4685.22Show/hide
Query:  MADDDDPWLAPDKLYHFLLCFTLTILFASLALHTRYPFIRRHSILIGSVVSLFAGAAKEVADELGFFKSAGASTRDAVADLIGVLIASFLLHALRFSIRS
        M DD+DPW APDKLYHFLLCFTLT+ FA+LA  TR+PFIRRHSI+IGSV+SLFAGAAKEVADELGFFKSAGASTRDAVADLIGVLIASF LHALRF IR 
Subjt:  MADDDDPWLAPDKLYHFLLCFTLTILFASLALHTRYPFIRRHSILIGSVVSLFAGAAKEVADELGFFKSAGASTRDAVADLIGVLIASFLLHALRFSIRS

Query:  CGDKEAKPNRDILMV
         G KEA PNRDILMV
Subjt:  CGDKEAKPNRDILMV
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G15900.1 unknown protein9.4e-2762.92Show/hide
Query:  DDDDPWLAPDKLYHFLLCFTLTILFASLALHTRYPFIRRHSILIGSVVSLFAGAAKEVADELGFFKSAGASTRDAVADLIGVLIASFLL
        D +DPWLA DKLYH + CF+++++F++LA  +RY F+RRHSI IGS  SL AGAAKE AD++G F SAGAS RDAVAD IGV+IA+ +L
Subjt:  DDDDPWLAPDKLYHFLLCFTLTILFASLALHTRYPFIRRHSILIGSVVSLFAGAAKEVADELGFFKSAGASTRDAVADLIGVLIASFLL

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGGACGACGACGATCCATGGTTAGCTCCCGACAAGCTCTACCATTTTCTTCTCTGTTTCACTCTCACTATCCTCTTCGCTTCATTGGCCCTTCACACGCGTTATCC
ATTCATCCGTCGCCACTCCATTCTGATCGGATCCGTCGTTTCTCTTTTCGCCGGAGCCGCTAAAGAGGTCGCCGACGAACTCGGCTTCTTCAAGTCCGCCGGAGCTTCTA
CCAGGGATGCTGTCGCCGATCTGATCGGCGTCTTGATCGCTTCTTTCCTTCTTCACGCCCTCAGATTCTCGATCCGCAGCTGCGGCGACAAAGAAGCTAAACCTAATCGG
GACATTTTAATGGTCTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCGGACGACGACGATCCATGGTTAGCTCCCGACAAGCTCTACCATTTTCTTCTCTGTTTCACTCTCACTATCCTCTTCGCTTCATTGGCCCTTCACACGCGTTATCC
ATTCATCCGTCGCCACTCCATTCTGATCGGATCCGTCGTTTCTCTTTTCGCCGGAGCCGCTAAAGAGGTCGCCGACGAACTCGGCTTCTTCAAGTCCGCCGGAGCTTCTA
CCAGGGATGCTGTCGCCGATCTGATCGGCGTCTTGATCGCTTCTTTCCTTCTTCACGCCCTCAGATTCTCGATCCGCAGCTGCGGCGACAAAGAAGCTAAACCTAATCGG
GACATTTTAATGGTCTGA
Protein sequenceShow/hide protein sequence
MADDDDPWLAPDKLYHFLLCFTLTILFASLALHTRYPFIRRHSILIGSVVSLFAGAAKEVADELGFFKSAGASTRDAVADLIGVLIASFLLHALRFSIRSCGDKEAKPNR
DILMV