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HG10002178 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10002178
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionUnknown protein
Genome locationChr11:4231860..4233240
RNA-Seq ExpressionHG10002178
SyntenyHG10002178
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004152177.2 uncharacterized protein LOC101209077 isoform X1 [Cucumis sativus]2.2e-5378.62Show/hide
Query:  MAAAATATGVLKIGVPAP----------AKPGKQPTSFARLAIRYPNCFLNTRLKFPVIRALGQGGNPSGNDDTDAGDFINQEDVQFLLKLAAGSIAGGC
        MAA ATATGVLKIGVPAP          AK G+ PT+FA L +RYPN FLNTR+KFP +RALGQGGNPSG+DD DAG FINQEDV+FLLKL AGSIAGG 
Subjt:  MAAAATATGVLKIGVPAP----------AKPGKQPTSFARLAIRYPNCFLNTRLKFPVIRALGQGGNPSGNDDTDAGDFINQEDVQFLLKLAAGSIAGGC

Query:  GIKYGSIIFPEITKPNIVQALIMISAPVFVAIWLLIKQSREERQS
        GIKYGSIIFPEITKPNIVQALIMIS PV VAIWLLIKQSREE QS
Subjt:  GIKYGSIIFPEITKPNIVQALIMISAPVFVAIWLLIKQSREERQS

XP_008454177.1 PREDICTED: uncharacterized protein LOC103494660 [Cucumis melo]1.9e-5281.02Show/hide
Query:  MAAAATATGVLKIGVPAP--AKPGKQPTSFARLAIRYPNCFLNTRLKFPVIRALGQGGNPSGNDDTDAGDFINQEDVQFLLKLAAGSIAGGCGIKYGSII
        MAA ATATGVLK G PAP  AK G+  T+FARL +RYPN FLNTR+KFP +RALGQGG PSGNDD DAG FINQEDV+F LKL AGSIAGG GIKYGSII
Subjt:  MAAAATATGVLKIGVPAP--AKPGKQPTSFARLAIRYPNCFLNTRLKFPVIRALGQGGNPSGNDDTDAGDFINQEDVQFLLKLAAGSIAGGCGIKYGSII

Query:  FPEITKPNIVQALIMISAPVFVAIWLLIKQSREERQS
        FPEITKPNIVQALIMIS PV VAIWLLIKQSREE QS
Subjt:  FPEITKPNIVQALIMISAPVFVAIWLLIKQSREERQS

XP_022153461.1 uncharacterized protein LOC111020963 [Momordica charantia]1.3e-4875.54Show/hide
Query:  AAAATATGVLKIGVPAPAKPGKQPTSFARLAIRYPNCFLNTRLKFPVIRAL-----GQGGNPSGNDDTDAGDFINQEDVQFLLKLAAGSIAGGCGIKYGS
        A AATATG LKIG+PAP KP K+ T+F RL +RYPNC LNT  K   IRAL     G+GGN SG+DDT AGDFINQEDVQFLLKL AGSIAGG GIKYGS
Subjt:  AAAATATGVLKIGVPAPAKPGKQPTSFARLAIRYPNCFLNTRLKFPVIRAL-----GQGGNPSGNDDTDAGDFINQEDVQFLLKLAAGSIAGGCGIKYGS

Query:  IIFPEITKPNIVQALIMISAPVFVAIWLLIKQSREERQS
        IIFP+I KPN+VQALIMIS PV +AIWLLIKQSREERQS
Subjt:  IIFPEITKPNIVQALIMISAPVFVAIWLLIKQSREERQS

XP_022955512.1 uncharacterized protein LOC111457518 isoform X1 [Cucurbita moschata]9.4e-4474.26Show/hide
Query:  MAAAATATGVLKIGVPAPAKPGKQ-PTSFARLAIRYPNCFLNTRLKFPVIRALGQGGNPSGNDDTDAGDFINQEDVQFLLKLAAGSIAGGCGIKYGSIIF
        MAA A ATG  KIGVPAP K  K+ PT+F RL +RYPNCFLNTR K P IRALGQ GN SG DD D G  I+QEDVQF+LK+AAGSIA G GIKYGSIIF
Subjt:  MAAAATATGVLKIGVPAPAKPGKQ-PTSFARLAIRYPNCFLNTRLKFPVIRALGQGGNPSGNDDTDAGDFINQEDVQFLLKLAAGSIAGGCGIKYGSIIF

Query:  PEITKPNIVQALIMISAPVFVAIWLLIKQSREERQS
        PE+TKPNIVQALIM+S PV VAIWLLI QSR++RQS
Subjt:  PEITKPNIVQALIMISAPVFVAIWLLIKQSREERQS

XP_038902938.1 uncharacterized protein LOC120089511 [Benincasa hispida]2.5e-6088.89Show/hide
Query:  MAAAATATGVLKIGVPAPAKPGKQPTSFARLAIRYPNCFLNTRLKFPVIRALGQGGNPSGNDDTDAGDFINQEDVQFLLKLAAGSIAGGCGIKYGSIIFP
        MAAA T TG LKIG+PAPAK  K+PT+FARL +RYPNCFLNTRLKFP IRALGQGGNPSGNDDTDAG FINQEDVQFLLKLAAGSIAGGCGIKYGSIIFP
Subjt:  MAAAATATGVLKIGVPAPAKPGKQPTSFARLAIRYPNCFLNTRLKFPVIRALGQGGNPSGNDDTDAGDFINQEDVQFLLKLAAGSIAGGCGIKYGSIIFP

Query:  EITKPNIVQALIMISAPVFVAIWLLIKQSREERQS
        E+TKPNIVQALIMISAPV VAIWLLI QSREERQS
Subjt:  EITKPNIVQALIMISAPVFVAIWLLIKQSREERQS

TrEMBL top hitse value%identityAlignment
A0A0A0KWZ3 Uncharacterized protein1.1e-5378.62Show/hide
Query:  MAAAATATGVLKIGVPAP----------AKPGKQPTSFARLAIRYPNCFLNTRLKFPVIRALGQGGNPSGNDDTDAGDFINQEDVQFLLKLAAGSIAGGC
        MAA ATATGVLKIGVPAP          AK G+ PT+FA L +RYPN FLNTR+KFP +RALGQGGNPSG+DD DAG FINQEDV+FLLKL AGSIAGG 
Subjt:  MAAAATATGVLKIGVPAP----------AKPGKQPTSFARLAIRYPNCFLNTRLKFPVIRALGQGGNPSGNDDTDAGDFINQEDVQFLLKLAAGSIAGGC

Query:  GIKYGSIIFPEITKPNIVQALIMISAPVFVAIWLLIKQSREERQS
        GIKYGSIIFPEITKPNIVQALIMIS PV VAIWLLIKQSREE QS
Subjt:  GIKYGSIIFPEITKPNIVQALIMISAPVFVAIWLLIKQSREERQS

A0A1S4E0N1 uncharacterized protein LOC1034946609.1e-5381.02Show/hide
Query:  MAAAATATGVLKIGVPAP--AKPGKQPTSFARLAIRYPNCFLNTRLKFPVIRALGQGGNPSGNDDTDAGDFINQEDVQFLLKLAAGSIAGGCGIKYGSII
        MAA ATATGVLK G PAP  AK G+  T+FARL +RYPN FLNTR+KFP +RALGQGG PSGNDD DAG FINQEDV+F LKL AGSIAGG GIKYGSII
Subjt:  MAAAATATGVLKIGVPAP--AKPGKQPTSFARLAIRYPNCFLNTRLKFPVIRALGQGGNPSGNDDTDAGDFINQEDVQFLLKLAAGSIAGGCGIKYGSII

Query:  FPEITKPNIVQALIMISAPVFVAIWLLIKQSREERQS
        FPEITKPNIVQALIMIS PV VAIWLLIKQSREE QS
Subjt:  FPEITKPNIVQALIMISAPVFVAIWLLIKQSREERQS

A0A6J1DKQ3 uncharacterized protein LOC1110209636.1e-4975.54Show/hide
Query:  AAAATATGVLKIGVPAPAKPGKQPTSFARLAIRYPNCFLNTRLKFPVIRAL-----GQGGNPSGNDDTDAGDFINQEDVQFLLKLAAGSIAGGCGIKYGS
        A AATATG LKIG+PAP KP K+ T+F RL +RYPNC LNT  K   IRAL     G+GGN SG+DDT AGDFINQEDVQFLLKL AGSIAGG GIKYGS
Subjt:  AAAATATGVLKIGVPAPAKPGKQPTSFARLAIRYPNCFLNTRLKFPVIRAL-----GQGGNPSGNDDTDAGDFINQEDVQFLLKLAAGSIAGGCGIKYGS

Query:  IIFPEITKPNIVQALIMISAPVFVAIWLLIKQSREERQS
        IIFP+I KPN+VQALIMIS PV +AIWLLIKQSREERQS
Subjt:  IIFPEITKPNIVQALIMISAPVFVAIWLLIKQSREERQS

A0A6J1GTV4 uncharacterized protein LOC111457518 isoform X14.5e-4474.26Show/hide
Query:  MAAAATATGVLKIGVPAPAKPGKQ-PTSFARLAIRYPNCFLNTRLKFPVIRALGQGGNPSGNDDTDAGDFINQEDVQFLLKLAAGSIAGGCGIKYGSIIF
        MAA A ATG  KIGVPAP K  K+ PT+F RL +RYPNCFLNTR K P IRALGQ GN SG DD D G  I+QEDVQF+LK+AAGSIA G GIKYGSIIF
Subjt:  MAAAATATGVLKIGVPAPAKPGKQ-PTSFARLAIRYPNCFLNTRLKFPVIRALGQGGNPSGNDDTDAGDFINQEDVQFLLKLAAGSIAGGCGIKYGSIIF

Query:  PEITKPNIVQALIMISAPVFVAIWLLIKQSREERQS
        PE+TKPNIVQALIM+S PV VAIWLLI QSR++RQS
Subjt:  PEITKPNIVQALIMISAPVFVAIWLLIKQSREERQS

A0A6J1GU58 uncharacterized protein LOC111457518 isoform X25.5e-4272.06Show/hide
Query:  MAAAATATGVLKIGVPAPAKPGKQ-PTSFARLAIRYPNCFLNTRLKFPVIRALGQGGNPSGNDDTDAGDFINQEDVQFLLKLAAGSIAGGCGIKYGSIIF
        MAA A ATG  KIGVPAP K  K+ PT+F RL +RYPNCFLNTR K P IRALGQ GN SG DD D G     +DVQF+LK+AAGSIA G GIKYGSIIF
Subjt:  MAAAATATGVLKIGVPAPAKPGKQ-PTSFARLAIRYPNCFLNTRLKFPVIRALGQGGNPSGNDDTDAGDFINQEDVQFLLKLAAGSIAGGCGIKYGSIIF

Query:  PEITKPNIVQALIMISAPVFVAIWLLIKQSREERQS
        PE+TKPNIVQALIM+S PV VAIWLLI QSR++RQS
Subjt:  PEITKPNIVQALIMISAPVFVAIWLLIKQSREERQS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G15900.1 unknown protein5.9e-1233.88Show/hide
Query:  LKIGVPAPAKPGK-----QPT-SFARLAIRYPNCFLNTRLKFPVIRALGQGGNPSGNDDTDAGDFINQEDVQFLLKLAAGSIAGGCGIKYGSIIFPEITK
        + IGVP  ++        +PT      ++++   F N        R+     +   ++  D G  I QED+ +LLK+  GS+AG   IKYGS++FP+IT+
Subjt:  LKIGVPAPAKPGK-----QPT-SFARLAIRYPNCFLNTRLKFPVIRALGQGGNPSGNDDTDAGDFINQEDVQFLLKLAAGSIAGGCGIKYGSIIFPEITK

Query:  PNIVQALIMISAPVFVAIWLL
        PN+  AL +I APV +++ LL
Subjt:  PNIVQALIMISAPVFVAIWLL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAGCGGCGGCGACGGCGACGGGAGTCTTGAAGATCGGCGTTCCGGCTCCGGCCAAACCAGGAAAGCAGCCGACGAGTTTCGCAAGGCTCGCAATTCGCTATCCAAA
TTGCTTTCTCAATACGCGGCTGAAATTTCCTGTCATTCGAGCACTTGGACAAGGAGGGAATCCGAGCGGCAACGACGACACCGATGCCGGCGATTTCATCAATCAGGAGG
ATGTTCAATTTTTGTTGAAATTGGCGGCAGGTTCCATAGCAGGGGGATGTGGAATAAAGTATGGAAGCATAATATTTCCAGAGATAACCAAACCCAACATCGTACAAGCT
CTTATCATGATATCAGCTCCTGTGTTTGTAGCCATATGGCTTTTGATCAAGCAAAGTCGTGAAGAGAGACAAAGCTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCAGCGGCGGCGACGGCGACGGGAGTCTTGAAGATCGGCGTTCCGGCTCCGGCCAAACCAGGAAAGCAGCCGACGAGTTTCGCAAGGCTCGCAATTCGCTATCCAAA
TTGCTTTCTCAATACGCGGCTGAAATTTCCTGTCATTCGAGCACTTGGACAAGGAGGGAATCCGAGCGGCAACGACGACACCGATGCCGGCGATTTCATCAATCAGGAGG
ATGTTCAATTTTTGTTGAAATTGGCGGCAGGTTCCATAGCAGGGGGATGTGGAATAAAGTATGGAAGCATAATATTTCCAGAGATAACCAAACCCAACATCGTACAAGCT
CTTATCATGATATCAGCTCCTGTGTTTGTAGCCATATGGCTTTTGATCAAGCAAAGTCGTGAAGAGAGACAAAGCTAA
Protein sequenceShow/hide protein sequence
MAAAATATGVLKIGVPAPAKPGKQPTSFARLAIRYPNCFLNTRLKFPVIRALGQGGNPSGNDDTDAGDFINQEDVQFLLKLAAGSIAGGCGIKYGSIIFPEITKPNIVQA
LIMISAPVFVAIWLLIKQSREERQS