CuGenDBv2

Gene ID	HG10002190
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	SAM domain-containing protein
Genome location	Chr11:4359850..4360419
RNA-Seq Expression	HG10002190
Synteny	HG10002190
Gene Ontology terms	NA
InterPro domains	IPR013761 - Sterile alpha motif/pointed domain superfamily

Homology

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GenBank top hits

e value

%identity

Alignment

KAA0044466.1 uncharacterized protein E6C27_scaffold46G002020 [Cucumis melo var. makuwa]

3.0e-80

81.68

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Query:  MDWFSWLSKTTLHPSLVYEYGLALAQNELEHEDILYFNHEFLQSIGISIAKHRLEILKLARKDNALHPRPITRLLLALKKTKRRFANLIRNFTHHDQLLD
        MDWFSWLSKT+LHPSLVYEYGLALA NELE+EDILYFNHEFLQSIGISIAKHRLEILKL RK+NALHPRPITR+LLALKKTKRRFANLIRNFTHHD  L+
Subjt:  MDWFSWLSKTTLHPSLVYEYGLALAQNELEHEDILYFNHEFLQSIGISIAKHRLEILKLARKDNALHPRPITRLLLALKKTKRRFANLIRNFTHHDQLLD

Query:  DSKALVLVPKSTYAAKFLKRNKTFSVGKQQGRFLLTNGSPDPGL-IWPRIHTFSGPILYDL-PAEEKKEKQKEDGVEEIRWDTMFQDLKPT
        +SKALVLVPKS+YAAK LKRNKTFSVGK QGRFLLTNGSPD  + I  RI  FSGPILYD+  +   +E++K++GVEEIRWD MFQ+LKPT
Subjt:  DSKALVLVPKSTYAAKFLKRNKTFSVGKQQGRFLLTNGSPDPGL-IWPRIHTFSGPILYDL-PAEEKKEKQKEDGVEEIRWDTMFQDLKPT

XP_004152186.1 uncharacterized protein LOC101211300 [Cucumis sativus]

7.9e-81

81.68

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Query:  MDWFSWLSKTTLHPSLVYEYGLALAQNELEHEDILYFNHEFLQSIGISIAKHRLEILKLARKDNALHPRPITRLLLALKKTKRRFANLIRNFTHHDQLLD
        MDWFSWLS+T+LHPSLVYEYGLALA NELEHEDILYFNHEFLQSIGISIAKHRLEILKL  K+NALHPRPITR+LLALKKTKRRFANLIRNFTHHD  L+
Subjt:  MDWFSWLSKTTLHPSLVYEYGLALAQNELEHEDILYFNHEFLQSIGISIAKHRLEILKLARKDNALHPRPITRLLLALKKTKRRFANLIRNFTHHDQLLD

Query:  DSKALVLVPKSTYAAKFLKRNKTFSVGKQQGRFLLTNGSPDPGL-IWPRIHTFSGPILYDL-PAEEKKEKQKEDGVEEIRWDTMFQDLKPT
        +SKALVLVPKS+YAAK LKRNKTFSVGK QGRFLLTNGSPDP + I  RI  FSGPILYD   A   +E++K++GVEEIRWD MFQ+L+PT
Subjt:  DSKALVLVPKSTYAAKFLKRNKTFSVGKQQGRFLLTNGSPDPGL-IWPRIHTFSGPILYDL-PAEEKKEKQKEDGVEEIRWDTMFQDLKPT

XP_008454194.1 PREDICTED: uncharacterized protein LOC103494673 [Cucumis melo]

3.0e-80

81.68

Show/hide

Query:  MDWFSWLSKTTLHPSLVYEYGLALAQNELEHEDILYFNHEFLQSIGISIAKHRLEILKLARKDNALHPRPITRLLLALKKTKRRFANLIRNFTHHDQLLD
        MDWFSWLSKT+LHPSLVYEYGLALA NELE+EDILYFNHEFLQSIGISIAKHRLEILKL RK+NALHPRPITR+LLALKKTKRRFANLIRNFTHHD  L+
Subjt:  MDWFSWLSKTTLHPSLVYEYGLALAQNELEHEDILYFNHEFLQSIGISIAKHRLEILKLARKDNALHPRPITRLLLALKKTKRRFANLIRNFTHHDQLLD

Query:  DSKALVLVPKSTYAAKFLKRNKTFSVGKQQGRFLLTNGSPDPGL-IWPRIHTFSGPILYDL-PAEEKKEKQKEDGVEEIRWDTMFQDLKPT
        +SKALVLVPKS+YAAK LKRNKTFSVGK QGRFLLTNGSPD  + I  RI  FSGPILYD+  +   +E++K++GVEEIRWD MFQ+LKPT
Subjt:  DSKALVLVPKSTYAAKFLKRNKTFSVGKQQGRFLLTNGSPDPGL-IWPRIHTFSGPILYDL-PAEEKKEKQKEDGVEEIRWDTMFQDLKPT

XP_022998747.1 uncharacterized protein LOC111493318 [Cucurbita maxima]

1.4e-77

78.35

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Query:  MDWFSWLSKTTLHPSLVYEYGLALAQNELEHEDILYFNHEFLQSIGISIAKHRLEILKLARKDNALHPRPITRLLLALKKTKRRFANLIRNFTHHDQLLD
        MDWFSWLSKTTL PSLVYEYGLAL+ NELE EDI+YFNHEFLQSIGISIAKHRLEILKLARKD ALHPRPITRLLLA+K+TKR FA LIRNF+ HD   D
Subjt:  MDWFSWLSKTTLHPSLVYEYGLALAQNELEHEDILYFNHEFLQSIGISIAKHRLEILKLARKDNALHPRPITRLLLALKKTKRRFANLIRNFTHHDQLLD

Query:  DSKALVLVPKSTYAAKFLKRNKTFSVGKQQGRFLLTNGSPDPGLIWPRIHTFSGPILYDLPAEEKKEKQKED-----GVEEIRWDTMFQDLKPT
        DSKALV+VPKSTY+ K LKRNK   V KQQGRFLLTNGSP PG +WPRI +FSGP++YDL  +EKKE+++ED     GVEEIRWDTMFQ+LKPT
Subjt:  DSKALVLVPKSTYAAKFLKRNKTFSVGKQQGRFLLTNGSPDPGLIWPRIHTFSGPILYDLPAEEKKEKQKED-----GVEEIRWDTMFQDLKPT

XP_038900622.1 uncharacterized protein LOC120087790 [Benincasa hispida]

1.1e-93

93.19

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Query:  MDWFSWLSKTTLHPSLVYEYGLALAQNELEHEDILYFNHEFLQSIGISIAKHRLEILKLARKDNALHPRPITRLLLALKKTKRRFANLIRNFT--HHDQL
        MDWFSWLSKTTLHPSLVYEYGLALA NELEHEDILYFNHEFLQSIGISIAKHRLEILKLARKDNALHPRPITRLLLALKKTKRRF+NLIRNFT  HHDQ 
Subjt:  MDWFSWLSKTTLHPSLVYEYGLALAQNELEHEDILYFNHEFLQSIGISIAKHRLEILKLARKDNALHPRPITRLLLALKKTKRRFANLIRNFT--HHDQL

Query:  LDDSKALVLVPKSTYAAKFLKRNKTFSVGKQQGRFLLTNGSPDPGLIWPRIHTFSGPILYDLPAEEKKEKQKEDGVEEIRWDTMFQDLKPT
        LDDSKALVLVPKS+YAAKFLKRNKTFSVGK QGRFLLTNGSPDPG+IWPRI TFSGPILYD PAEEKK K+KEDGVEEIRWD MFQDLKPT
Subjt:  LDDSKALVLVPKSTYAAKFLKRNKTFSVGKQQGRFLLTNGSPDPGLIWPRIHTFSGPILYDLPAEEKKEKQKEDGVEEIRWDTMFQDLKPT

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KVK9 Uncharacterized protein

3.8e-81

81.68

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Query:  MDWFSWLSKTTLHPSLVYEYGLALAQNELEHEDILYFNHEFLQSIGISIAKHRLEILKLARKDNALHPRPITRLLLALKKTKRRFANLIRNFTHHDQLLD
        MDWFSWLS+T+LHPSLVYEYGLALA NELEHEDILYFNHEFLQSIGISIAKHRLEILKL  K+NALHPRPITR+LLALKKTKRRFANLIRNFTHHD  L+
Subjt:  MDWFSWLSKTTLHPSLVYEYGLALAQNELEHEDILYFNHEFLQSIGISIAKHRLEILKLARKDNALHPRPITRLLLALKKTKRRFANLIRNFTHHDQLLD

Query:  DSKALVLVPKSTYAAKFLKRNKTFSVGKQQGRFLLTNGSPDPGL-IWPRIHTFSGPILYDL-PAEEKKEKQKEDGVEEIRWDTMFQDLKPT
        +SKALVLVPKS+YAAK LKRNKTFSVGK QGRFLLTNGSPDP + I  RI  FSGPILYD   A   +E++K++GVEEIRWD MFQ+L+PT
Subjt:  DSKALVLVPKSTYAAKFLKRNKTFSVGKQQGRFLLTNGSPDPGL-IWPRIHTFSGPILYDL-PAEEKKEKQKEDGVEEIRWDTMFQDLKPT

A0A1S3BZ95 uncharacterized protein LOC103494673

1.4e-80

81.68

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Query:  MDWFSWLSKTTLHPSLVYEYGLALAQNELEHEDILYFNHEFLQSIGISIAKHRLEILKLARKDNALHPRPITRLLLALKKTKRRFANLIRNFTHHDQLLD
        MDWFSWLSKT+LHPSLVYEYGLALA NELE+EDILYFNHEFLQSIGISIAKHRLEILKL RK+NALHPRPITR+LLALKKTKRRFANLIRNFTHHD  L+
Subjt:  MDWFSWLSKTTLHPSLVYEYGLALAQNELEHEDILYFNHEFLQSIGISIAKHRLEILKLARKDNALHPRPITRLLLALKKTKRRFANLIRNFTHHDQLLD

Query:  DSKALVLVPKSTYAAKFLKRNKTFSVGKQQGRFLLTNGSPDPGL-IWPRIHTFSGPILYDL-PAEEKKEKQKEDGVEEIRWDTMFQDLKPT
        +SKALVLVPKS+YAAK LKRNKTFSVGK QGRFLLTNGSPD  + I  RI  FSGPILYD+  +   +E++K++GVEEIRWD MFQ+LKPT
Subjt:  DSKALVLVPKSTYAAKFLKRNKTFSVGKQQGRFLLTNGSPDPGL-IWPRIHTFSGPILYDL-PAEEKKEKQKEDGVEEIRWDTMFQDLKPT

A0A5A7TQT5 Uncharacterized protein

1.4e-80

81.68

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Query:  MDWFSWLSKTTLHPSLVYEYGLALAQNELEHEDILYFNHEFLQSIGISIAKHRLEILKLARKDNALHPRPITRLLLALKKTKRRFANLIRNFTHHDQLLD
        MDWFSWLSKT+LHPSLVYEYGLALA NELE+EDILYFNHEFLQSIGISIAKHRLEILKL RK+NALHPRPITR+LLALKKTKRRFANLIRNFTHHD  L+
Subjt:  MDWFSWLSKTTLHPSLVYEYGLALAQNELEHEDILYFNHEFLQSIGISIAKHRLEILKLARKDNALHPRPITRLLLALKKTKRRFANLIRNFTHHDQLLD

Query:  DSKALVLVPKSTYAAKFLKRNKTFSVGKQQGRFLLTNGSPDPGL-IWPRIHTFSGPILYDL-PAEEKKEKQKEDGVEEIRWDTMFQDLKPT
        +SKALVLVPKS+YAAK LKRNKTFSVGK QGRFLLTNGSPD  + I  RI  FSGPILYD+  +   +E++K++GVEEIRWD MFQ+LKPT
Subjt:  DSKALVLVPKSTYAAKFLKRNKTFSVGKQQGRFLLTNGSPDPGL-IWPRIHTFSGPILYDL-PAEEKKEKQKEDGVEEIRWDTMFQDLKPT

A0A5D3E0J4 Uncharacterized protein

1.4e-80

81.68

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Query:  MDWFSWLSKTTLHPSLVYEYGLALAQNELEHEDILYFNHEFLQSIGISIAKHRLEILKLARKDNALHPRPITRLLLALKKTKRRFANLIRNFTHHDQLLD
        MDWFSWLSKT+LHPSLVYEYGLALA NELE+EDILYFNHEFLQSIGISIAKHRLEILKL RK+NALHPRPITR+LLALKKTKRRFANLIRNFTHHD  L+
Subjt:  MDWFSWLSKTTLHPSLVYEYGLALAQNELEHEDILYFNHEFLQSIGISIAKHRLEILKLARKDNALHPRPITRLLLALKKTKRRFANLIRNFTHHDQLLD

Query:  DSKALVLVPKSTYAAKFLKRNKTFSVGKQQGRFLLTNGSPDPGL-IWPRIHTFSGPILYDL-PAEEKKEKQKEDGVEEIRWDTMFQDLKPT
        +SKALVLVPKS+YAAK LKRNKTFSVGK QGRFLLTNGSPD  + I  RI  FSGPILYD+  +   +E++K++GVEEIRWD MFQ+LKPT
Subjt:  DSKALVLVPKSTYAAKFLKRNKTFSVGKQQGRFLLTNGSPDPGL-IWPRIHTFSGPILYDL-PAEEKKEKQKEDGVEEIRWDTMFQDLKPT

A0A6J1K8U0 uncharacterized protein LOC111493318

6.7e-78

78.35

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Query:  MDWFSWLSKTTLHPSLVYEYGLALAQNELEHEDILYFNHEFLQSIGISIAKHRLEILKLARKDNALHPRPITRLLLALKKTKRRFANLIRNFTHHDQLLD
        MDWFSWLSKTTL PSLVYEYGLAL+ NELE EDI+YFNHEFLQSIGISIAKHRLEILKLARKD ALHPRPITRLLLA+K+TKR FA LIRNF+ HD   D
Subjt:  MDWFSWLSKTTLHPSLVYEYGLALAQNELEHEDILYFNHEFLQSIGISIAKHRLEILKLARKDNALHPRPITRLLLALKKTKRRFANLIRNFTHHDQLLD

Query:  DSKALVLVPKSTYAAKFLKRNKTFSVGKQQGRFLLTNGSPDPGLIWPRIHTFSGPILYDLPAEEKKEKQKED-----GVEEIRWDTMFQDLKPT
        DSKALV+VPKSTY+ K LKRNK   V KQQGRFLLTNGSP PG +WPRI +FSGP++YDL  +EKKE+++ED     GVEEIRWDTMFQ+LKPT
Subjt:  DSKALVLVPKSTYAAKFLKRNKTFSVGKQQGRFLLTNGSPDPGLIWPRIHTFSGPILYDLPAEEKKEKQKED-----GVEEIRWDTMFQDLKPT

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT1G15760.1 Sterile alpha motif (SAM) domain-containing protein

5.7e-45

48.53

Show/hide

Query:  WFSWLSKTTLHPSLVYEYGLALAQNELEHEDILYFNHEFLQSIGISIAKHRLEILKLARKDNALHP----RPITRLLLALKKTKRRFANLIRNFTHHDQL
        WFSWLS+T L PSL++EYGL+ +QNELEHEDI YF+HEFLQS+GISIAKHRLEILKLAR+D    P    R I+R++ A+KKT++  ++ +R +   ++ 
Subjt:  WFSWLSKTTLHPSLVYEYGLALAQNELEHEDILYFNHEFLQSIGISIAKHRLEILKLARKDNALHP----RPITRLLLALKKTKRRFANLIRNFTHHDQL

Query:  LDDSKALVLVPKST------YAAKFLKRNKTFSVG-------KQQGRFLLTNGSPDPGLIWPRIHTFSGPILYDLPAEEKKEKQKEDGVEEIRWDTMFQD
           S+ALVLVPK T      +   FLKRNK   +        ++Q R LLTNG+P       RI +FS P+++D   +++K   ++   E+I+WD+MFQ+
Subjt:  LDDSKALVLVPKST------YAAKFLKRNKTFSVG-------KQQGRFLLTNGSPDPGLIWPRIHTFSGPILYDLPAEEKKEKQKEDGVEEIRWDTMFQD

Query:  LKPT
        LKPT
Subjt:  LKPT

AT1G80520.1 Sterile alpha motif (SAM) domain-containing protein

1.6e-39

46.27

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Query:  MDWFSWLSKTTLHPSLVYEYGLALAQNELEHEDILYFNHEFLQSIGISIAKHRLEILKLARKDNALHP---RPITRLLLALKKTKRRFANLIRNFTHHDQ
        MDWFSWLS+T L  SL+YEYGL+ + NELE+EDI YFNHEFLQS+GISIAKHRLEILKLAR+D    P   R I R+L+A+KKT + F+  +R +   + 
Subjt:  MDWFSWLSKTTLHPSLVYEYGLALAQNELEHEDILYFNHEFLQSIGISIAKHRLEILKLARKDNALHP---RPITRLLLALKKTKRRFANLIRNFTHHDQ

Query:  LLDDSKALVLVPKSTYAA-----KFLKRNK----TFSVGKQQGRFLLTNGSPDPGLIWPRIHTFSGPILYDLPAEEKKEKQKEDGVEEIRWDTMFQDLKP
          + S+ALV+V +ST ++     K  ++ +    +   G ++ R LLTNG+P       R+ +FS P +     ++      +D  E+I+WD+MFQ+LKP
Subjt:  LLDDSKALVLVPKSTYAA-----KFLKRNK----TFSVGKQQGRFLLTNGSPDPGLIWPRIHTFSGPILYDLPAEEKKEKQKEDGVEEIRWDTMFQDLKP

Query:  T
        T
Subjt:  T

AT2G12462.1 BEST Arabidopsis thaliana protein match is: Sterile alpha motif (SAM) domain-containing protein (TAIR:AT1G15760.1)

9.1e-19

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Query:  MDWFSWLSKTTLHPSLVYEYGLALAQNELEHEDILYFNHEFLQSIGISIAKHRLEILKLARKD----NALHPRPITRLLLA--LKKTK
        MDWFSWLSKT L P+L YEYGL  AQ +L+ EDI  FNH FL+ +G+++ KHR+EILKL++++    ++ + RP++  L++  +K TK
Subjt:  MDWFSWLSKTTLHPSLVYEYGLALAQNELEHEDILYFNHEFLQSIGISIAKHRLEILKLARKD----NALHPRPITRLLLA--LKKTK

Sequences

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CDS sequence

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ATGGATTGGTTCTCATGGCTTTCAAAAACAACTCTCCATCCTTCTTTGGTCTACGAATACGGGCTTGCCCTAGCTCAAAACGAGCTCGAACACGAAGATATTCTCTATTT
CAACCACGAATTTCTCCAGAGCATCGGAATCTCCATTGCCAAGCATCGCCTCGAGATCCTCAAGCTTGCTCGTAAAGACAACGCCCTCCATCCTCGTCCCATCACTCGCC
TTCTCCTCGCTCTCAAGAAAACCAAGCGCCGATTCGCGAATCTCATCCGCAATTTCACTCATCACGATCAATTATTAGACGATTCTAAAGCCCTAGTTCTCGTTCCCAAA
TCAACCTACGCCGCTAAATTCCTCAAGAGGAACAAGACATTCTCCGTCGGGAAACAGCAGGGGAGGTTTCTACTGACTAATGGAAGTCCGGATCCCGGTCTGATCTGGCC
GCGAATTCACACTTTTTCCGGTCCGATTCTGTACGATCTGCCGGCCGAGGAGAAGAAGGAGAAGCAGAAGGAGGATGGAGTTGAGGAAATCAGGTGGGATACAATGTTTC
AGGATTTGAAACCTACTTGA

mRNA sequence

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Protein sequence

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MDWFSWLSKTTLHPSLVYEYGLALAQNELEHEDILYFNHEFLQSIGISIAKHRLEILKLARKDNALHPRPITRLLLALKKTKRRFANLIRNFTHHDQLLDDSKALVLVPK
STYAAKFLKRNKTFSVGKQQGRFLLTNGSPDPGLIWPRIHTFSGPILYDLPAEEKKEKQKEDGVEEIRWDTMFQDLKPT

HG10002190 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome