; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

HG10002197 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10002197
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptiondTMP kinase
Genome locationChr11:4412840..4413235
RNA-Seq ExpressionHG10002197
SyntenyHG10002197
Gene Ontology termsGO:0009165 - nucleotide biosynthetic process (biological process)
GO:0016301 - kinase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0044460.1 thymidylate kinase isoform X2 [Cucumis melo var. makuwa]5.4e-2071.96Show/hide
Query:  GGDRSGTGGGSENSGRGGEKVIKGVGVDNSGGGGNQVEGVGVDNSGGGEETRGGGNQVEGVGVDDN-GGGEGTKGGGTISEGVGVDCSGGGGEGTKGVGG
        GG RS TGGGS+N G GGE V K               GVGVDNSGGGEETRGGGNQVEGVGV+DN GGGEGTKGGGT+SEGVGVDC+GGGGEGT+GVG 
Subjt:  GGDRSGTGGGSENSGRGGEKVIKGVGVDNSGGGGNQVEGVGVDNSGGGEETRGGGNQVEGVGVDDN-GGGEGTKGGGTISEGVGVDCSGGGGEGTKGVGG

Query:  DEGGGDG
          GGGDG
Subjt:  DEGGGDG
XP_038890617.1 glycine-rich cell wall structural protein 1.0 [Benincasa hispida]1.5e-3077.1Show/hide
Query:  MGGDRSGTGGGSENSGRGGEKVIKGVGVDNSGGGGNQVEGVGVDNSGGGEETRGGGNQVEGVGVDDNGGGEGTKGGGTISEGVGVDCSGGGGEGTKGVGG
        MGG RSGTGGGS+NSGRGGE VIKG                GVD+SGGGEETRGGGNQ+EGVGVDDNGGGEGT GGG ISEGVGVD SGGGGEGTKGV  
Subjt:  MGGDRSGTGGGSENSGRGGEKVIKGVGVDNSGGGGNQVEGVGVDNSGGGEETRGGGNQVEGVGVDDNGGGEGTKGGGTISEGVGVDCSGGGGEGTKGVGG

Query:  DEGGGDGVSGEAKGGGGDAGRGGGEGTTGAG
           GGDGVSGEAKGGGGDAGRGGGEGT GAG
Subjt:  DEGGGDGVSGEAKGGGGDAGRGGGEGTTGAG
TrEMBL top hitse value%identityAlignment
A0A5D2DVX2 Uncharacterized protein7.6e-0450.38Show/hide
Query:  GGDRSGTGGGSENSGRGGEKVIKGVGVDNSGGGGNQVEGVGVDNSGGGEETRGGGNQVEGVGVDDNGGGEGTKGGGTISEGVGVDCSGGGGEGTKGVG--
        GG   GTGGG E +G GG+    G G + +GGG +   G G    GGGE T GGG+ + G G    GGGEGT GGG  + G G    GGGGEGT G G  
Subjt:  GGDRSGTGGGSENSGRGGEKVIKGVGVDNSGGGGNQVEGVGVDNSGGGEETRGGGNQVEGVGVDDNGGGEGTKGGGTISEGVGVDCSGGGGEGTKGVG--

Query:  -GDEGGGDGVSGEAKGGGGDAGRGGGEGTTGAG
         G  G G G  GE  GGGGD   GGGEGT G G
Subjt:  -GDEGGGDGVSGEAKGGGGDAGRGGGEGTTGAG
A0A5D3E0G4 dTMP kinase2.6e-2071.96Show/hide
Query:  GGDRSGTGGGSENSGRGGEKVIKGVGVDNSGGGGNQVEGVGVDNSGGGEETRGGGNQVEGVGVDDN-GGGEGTKGGGTISEGVGVDCSGGGGEGTKGVGG
        GG RS TGGGS+N G GGE V K               GVGVDNSGGGEETRGGGNQVEGVGV+DN GGGEGTKGGGT+SEGVGVDC+GGGGEGT+GVG 
Subjt:  GGDRSGTGGGSENSGRGGEKVIKGVGVDNSGGGGNQVEGVGVDNSGGGEETRGGGNQVEGVGVDDN-GGGEGTKGGGTISEGVGVDCSGGGGEGTKGVGG

Query:  DEGGGDG
          GGGDG
Subjt:  DEGGGDG
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAGGTGACAGATCAGGCACTGGTGGAGGTAGTGAAAATTCTGGCAGAGGTGGTGAGAAGGTTATTAAAGGTGTTGGAGTAGATAATAGTGGTGGTGGTGGAAACCA
GGTTGAAGGTGTTGGAGTAGATAATAGTGGTGGTGGTGAAGAAACTAGAGGTGGTGGAAACCAGGTTGAAGGTGTTGGAGTAGATGATAATGGTGGTGGTGAAGGCACCA
AAGGTGGTGGAACCATTTCTGAAGGAGTTGGAGTAGATTGCAGCGGTGGTGGCGGTGAAGGAACCAAGGGTGTTGGGGGAGATGAAGGAGGTGGAGATGGAGTTTCAGGT
GAAGCCAAGGGCGGTGGCGGTGATGCAGGAAGAGGAGGTGGAGAAGGAACTACGGGAGCTGGCTGA
mRNA sequenceShow/hide mRNA sequence
ATGGGAGGTGACAGATCAGGCACTGGTGGAGGTAGTGAAAATTCTGGCAGAGGTGGTGAGAAGGTTATTAAAGGTGTTGGAGTAGATAATAGTGGTGGTGGTGGAAACCA
GGTTGAAGGTGTTGGAGTAGATAATAGTGGTGGTGGTGAAGAAACTAGAGGTGGTGGAAACCAGGTTGAAGGTGTTGGAGTAGATGATAATGGTGGTGGTGAAGGCACCA
AAGGTGGTGGAACCATTTCTGAAGGAGTTGGAGTAGATTGCAGCGGTGGTGGCGGTGAAGGAACCAAGGGTGTTGGGGGAGATGAAGGAGGTGGAGATGGAGTTTCAGGT
GAAGCCAAGGGCGGTGGCGGTGATGCAGGAAGAGGAGGTGGAGAAGGAACTACGGGAGCTGGCTGA
Protein sequenceShow/hide protein sequence
MGGDRSGTGGGSENSGRGGEKVIKGVGVDNSGGGGNQVEGVGVDNSGGGEETRGGGNQVEGVGVDDNGGGEGTKGGGTISEGVGVDCSGGGGEGTKGVGGDEGGGDGVSG
EAKGGGGDAGRGGGEGTTGAG