; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

HG10002198 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10002198
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionRibonuclease 3-like protein 1
Genome locationChr11:4419911..4422595
RNA-Seq ExpressionHG10002198
SyntenyHG10002198
Gene Ontology termsGO:0030422 - production of siRNA involved in RNA interference (biological process)
GO:0090502 - RNA phosphodiester bond hydrolysis, endonucleolytic (biological process)
GO:0005634 - nucleus (cellular component)
GO:0005737 - cytoplasm (cellular component)
GO:0003723 - RNA binding (molecular function)
GO:0004525 - ribonuclease III activity (molecular function)
InterPro domainsIPR014720 - Double-stranded RNA-binding domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004152191.1 uncharacterized protein LOC101212514 [Cucumis sativus]1.1e-9477.09Show/hide
Query:  MRQYTEIVEAERKNLGKQMENTRSC-PRRLNVNLKNLPPINNPRIGNENHPSIPAKFEKSRYIRRVPQFMPPNYRSEIRPNEYSGLPIKPACSDSARALN
        MR Y++IV  ERKN G QMEN  SC P RLN+NLKNLPPINNPR  + +H SIPAKFEKSRYIRRVPQFMP ++R EIR N+Y+GLP+K A SDSARALN
Subjt:  MRQYTEIVEAERKNLGKQMENTRSC-PRRLNVNLKNLPPINNPRIGNENHPSIPAKFEKSRYIRRVPQFMPPNYRSEIRPNEYSGLPIKPACSDSARALN

Query:  TKTIPEAPS-DSFVEKKDNCKEITSRCCCCRHGSTKEGTSEKISAKSLLFEICTANHWQPPLFECCEEEGPSHAKKYKFKVTVEMKGACGTILECYGNPQ
        TKT P APS DSFV KKD CK++ SRC CCRH STKEGT EK +AKSLLFEICTANHWQPPLFECCEEEGPSHAKKY+FKV +EMKG C  ++ECYGN Q
Subjt:  TKTIPEAPS-DSFVEKKDNCKEITSRCCCCRHGSTKEGTSEKISAKSLLFEICTANHWQPPLFECCEEEGPSHAKKYKFKVTVEMKGACGTILECYGNPQ

Query:  TRKKVAAEHAAEGALWYLKHLGYCFKR
        TRKKVAAEHAAEGALWYL HLGY FKR
Subjt:  TRKKVAAEHAAEGALWYLKHLGYCFKR

XP_008454206.1 PREDICTED: uncharacterized protein LOC103494682 isoform X1 [Cucumis melo]1.5e-9477.19Show/hide
Query:  MRQYTEIVEAERKNLGKQME-NTRSCPRRLNVNLKNLPPINNPRIGNENHPSIPAKFEKSRYIRRVPQFMPPNYRSEIRPNEYSGLP-IKPACSDSARAL
        MR YTEIV AERKN G QME N  SCP RLN+NLKNLPPINNPR     H SIPAKFEKSRYIRRVPQF+P ++R EIR N Y GLP +K ACSDSARA+
Subjt:  MRQYTEIVEAERKNLGKQME-NTRSCPRRLNVNLKNLPPINNPRIGNENHPSIPAKFEKSRYIRRVPQFMPPNYRSEIRPNEYSGLP-IKPACSDSARAL

Query:  NTKTIPEAPS-DSFVEKKDNCKEITSRCCCCRHGSTKEGTSEKISAKSLLFEICTANHWQPPLFECCEEEGPSHAKKYKFKVTVEMKGACGTILECYGNP
        NTKTIP APS D FV+KKDNCK++ SRC CCRHGSTKEGT EK +AKSLLFEICTANHWQPPLFECCEEEGPSHA+KY+FKV++EMKG C  ++ECYGN 
Subjt:  NTKTIPEAPS-DSFVEKKDNCKEITSRCCCCRHGSTKEGTSEKISAKSLLFEICTANHWQPPLFECCEEEGPSHAKKYKFKVTVEMKGACGTILECYGNP

Query:  QTRKKVAAEHAAEGALWYLKHLGYCFKR
        QTRKK+AAEHAAEGALWYLK+LGY F+R
Subjt:  QTRKKVAAEHAAEGALWYLKHLGYCFKR

XP_038878769.1 ribonuclease 3-like protein 1 isoform X1 [Benincasa hispida]1.8e-10082.81Show/hide
Query:  TEIVEAERKNLGKQMENTRSCPRRLNVNLKNLPPINNPRIGNENHPSIPAKFEKSRYIRRVPQFMPPNYRSEIRPNEYSGLPIKPACSDSARALNTKTIP
        TEIVEAERKN G QMENT SCPRRLN NLKNLPPINN  IG  NH SI AKFEKSRYIRRVPQF+P N+    RPNEY+GLP+KPACS SARALN+KTIP
Subjt:  TEIVEAERKNLGKQMENTRSCPRRLNVNLKNLPPINNPRIGNENHPSIPAKFEKSRYIRRVPQFMPPNYRSEIRPNEYSGLPIKPACSDSARALNTKTIP

Query:  EAPSDSFVEKKDNCKEITSRCCCCRHGSTKEGTSEKISAKSLLFEICTANHWQPPLFECCEEEGPSHAKKYKFKVTVEMKGACGTILECYGNPQTRKKVA
        EAPSDSFV+KKDN +EI SR  CC HGSTKEGT EK +AKSLLFEICTANHWQPPLFECCEEEGPSHAKKY+FKVTVEMKGA  T+LECYGN QTRKKVA
Subjt:  EAPSDSFVEKKDNCKEITSRCCCCRHGSTKEGTSEKISAKSLLFEICTANHWQPPLFECCEEEGPSHAKKYKFKVTVEMKGACGTILECYGNPQTRKKVA

Query:  AEHAAEGALWYLKHLGYCFKR
        AEHAAEGA+WYLK+LGYCFKR
Subjt:  AEHAAEGALWYLKHLGYCFKR

XP_038878786.1 ribonuclease 3-like protein 1 isoform X2 [Benincasa hispida]1.6e-9382.38Show/hide
Query:  TEIVEAERKNLGKQMENTRSCPRRLNVNLKNLPPINNPRIGNENHPSIPAKFEKSRYIRRVPQFMPPNYRSEIRPNEYSGLPIKPACSDSARALNTKTIP
        TEIVEAERKN G QMENT SCPRRLN NLKNLPPINN  IG  NH SI AKFEKSRYIRRVPQF+P N+    RPNEY+GLP+KPACS SARALN+KTIP
Subjt:  TEIVEAERKNLGKQMENTRSCPRRLNVNLKNLPPINNPRIGNENHPSIPAKFEKSRYIRRVPQFMPPNYRSEIRPNEYSGLPIKPACSDSARALNTKTIP

Query:  EAPSDSFVEKKDNCKEITSRCCCCRHGSTKEGTSEKISAKSLLFEICTANHWQPPLFECCEEEGPSHAKKYKFKVTVEMKGACGTILECYGNPQTRKKVA
        EAPSDSFV+KKDN +EI SR  CC HGSTKEGT EK +AKSLLFEICTANHWQPPLFECCEEEGPSHAKKY+FKVTVEMKGA  T+LECYGN QTRKKVA
Subjt:  EAPSDSFVEKKDNCKEITSRCCCCRHGSTKEGTSEKISAKSLLFEICTANHWQPPLFECCEEEGPSHAKKYKFKVTVEMKGACGTILECYGNPQTRKKVA

Query:  AEHAAEGALW
        AEHAAEGA+W
Subjt:  AEHAAEGALW

XP_038878793.1 ribonuclease 3-like protein 1 isoform X3 [Benincasa hispida]5.6e-9482.61Show/hide
Query:  MENTRSCPRRLNVNLKNLPPINNPRIGNENHPSIPAKFEKSRYIRRVPQFMPPNYRSEIRPNEYSGLPIKPACSDSARALNTKTIPEAPSDSFVEKKDNC
        MENT SCPRRLN NLKNLPPINN  IG  NH SI AKFEKSRYIRRVPQF+P N+    RPNEY+GLP+KPACS SARALN+KTIPEAPSDSFV+KKDN 
Subjt:  MENTRSCPRRLNVNLKNLPPINNPRIGNENHPSIPAKFEKSRYIRRVPQFMPPNYRSEIRPNEYSGLPIKPACSDSARALNTKTIPEAPSDSFVEKKDNC

Query:  KEITSRCCCCRHGSTKEGTSEKISAKSLLFEICTANHWQPPLFECCEEEGPSHAKKYKFKVTVEMKGACGTILECYGNPQTRKKVAAEHAAEGALWYLKH
        +EI SR  CC HGSTKEGT EK +AKSLLFEICTANHWQPPLFECCEEEGPSHAKKY+FKVTVEMKGA  T+LECYGN QTRKKVAAEHAAEGA+WYLK+
Subjt:  KEITSRCCCCRHGSTKEGTSEKISAKSLLFEICTANHWQPPLFECCEEEGPSHAKKYKFKVTVEMKGACGTILECYGNPQTRKKVAAEHAAEGALWYLKH

Query:  LGYCFKR
        LGYCFKR
Subjt:  LGYCFKR

TrEMBL top hitse value%identityAlignment
A0A0A0KYI7 DRBM domain-containing protein5.5e-9577.09Show/hide
Query:  MRQYTEIVEAERKNLGKQMENTRSC-PRRLNVNLKNLPPINNPRIGNENHPSIPAKFEKSRYIRRVPQFMPPNYRSEIRPNEYSGLPIKPACSDSARALN
        MR Y++IV  ERKN G QMEN  SC P RLN+NLKNLPPINNPR  + +H SIPAKFEKSRYIRRVPQFMP ++R EIR N+Y+GLP+K A SDSARALN
Subjt:  MRQYTEIVEAERKNLGKQMENTRSC-PRRLNVNLKNLPPINNPRIGNENHPSIPAKFEKSRYIRRVPQFMPPNYRSEIRPNEYSGLPIKPACSDSARALN

Query:  TKTIPEAPS-DSFVEKKDNCKEITSRCCCCRHGSTKEGTSEKISAKSLLFEICTANHWQPPLFECCEEEGPSHAKKYKFKVTVEMKGACGTILECYGNPQ
        TKT P APS DSFV KKD CK++ SRC CCRH STKEGT EK +AKSLLFEICTANHWQPPLFECCEEEGPSHAKKY+FKV +EMKG C  ++ECYGN Q
Subjt:  TKTIPEAPS-DSFVEKKDNCKEITSRCCCCRHGSTKEGTSEKISAKSLLFEICTANHWQPPLFECCEEEGPSHAKKYKFKVTVEMKGACGTILECYGNPQ

Query:  TRKKVAAEHAAEGALWYLKHLGYCFKR
        TRKKVAAEHAAEGALWYL HLGY FKR
Subjt:  TRKKVAAEHAAEGALWYLKHLGYCFKR

A0A1S3BXK0 uncharacterized protein LOC103494682 isoform X17.2e-9577.19Show/hide
Query:  MRQYTEIVEAERKNLGKQME-NTRSCPRRLNVNLKNLPPINNPRIGNENHPSIPAKFEKSRYIRRVPQFMPPNYRSEIRPNEYSGLP-IKPACSDSARAL
        MR YTEIV AERKN G QME N  SCP RLN+NLKNLPPINNPR     H SIPAKFEKSRYIRRVPQF+P ++R EIR N Y GLP +K ACSDSARA+
Subjt:  MRQYTEIVEAERKNLGKQME-NTRSCPRRLNVNLKNLPPINNPRIGNENHPSIPAKFEKSRYIRRVPQFMPPNYRSEIRPNEYSGLP-IKPACSDSARAL

Query:  NTKTIPEAPS-DSFVEKKDNCKEITSRCCCCRHGSTKEGTSEKISAKSLLFEICTANHWQPPLFECCEEEGPSHAKKYKFKVTVEMKGACGTILECYGNP
        NTKTIP APS D FV+KKDNCK++ SRC CCRHGSTKEGT EK +AKSLLFEICTANHWQPPLFECCEEEGPSHA+KY+FKV++EMKG C  ++ECYGN 
Subjt:  NTKTIPEAPS-DSFVEKKDNCKEITSRCCCCRHGSTKEGTSEKISAKSLLFEICTANHWQPPLFECCEEEGPSHAKKYKFKVTVEMKGACGTILECYGNP

Query:  QTRKKVAAEHAAEGALWYLKHLGYCFKR
        QTRKK+AAEHAAEGALWYLK+LGY F+R
Subjt:  QTRKKVAAEHAAEGALWYLKHLGYCFKR

A0A5D3E0Z9 Ribonuclease 3-like protein 17.2e-9577.19Show/hide
Query:  MRQYTEIVEAERKNLGKQME-NTRSCPRRLNVNLKNLPPINNPRIGNENHPSIPAKFEKSRYIRRVPQFMPPNYRSEIRPNEYSGLP-IKPACSDSARAL
        MR YTEIV AERKN G QME N  SCP RLN+NLKNLPPINNPR     H SIPAKFEKSRYIRRVPQF+P ++R EIR N Y GLP +K ACSDSARA+
Subjt:  MRQYTEIVEAERKNLGKQME-NTRSCPRRLNVNLKNLPPINNPRIGNENHPSIPAKFEKSRYIRRVPQFMPPNYRSEIRPNEYSGLP-IKPACSDSARAL

Query:  NTKTIPEAPS-DSFVEKKDNCKEITSRCCCCRHGSTKEGTSEKISAKSLLFEICTANHWQPPLFECCEEEGPSHAKKYKFKVTVEMKGACGTILECYGNP
        NTKTIP APS D FV+KKDNCK++ SRC CCRHGSTKEGT EK +AKSLLFEICTANHWQPPLFECCEEEGPSHA+KY+FKV++EMKG C  ++ECYGN 
Subjt:  NTKTIPEAPS-DSFVEKKDNCKEITSRCCCCRHGSTKEGTSEKISAKSLLFEICTANHWQPPLFECCEEEGPSHAKKYKFKVTVEMKGACGTILECYGNP

Query:  QTRKKVAAEHAAEGALWYLKHLGYCFKR
        QTRKK+AAEHAAEGALWYLK+LGY F+R
Subjt:  QTRKKVAAEHAAEGALWYLKHLGYCFKR

A0A6J1GVX2 ribonuclease 3-like protein 1 isoform X21.0e-8070.18Show/hide
Query:  YTEIVEAERKNLGKQMENTRSCPRRLNVNLKNLPPINNPRIGNENHPSIPAKFEKSRYIRRVPQFMPPNYRSEIRPNEYSGLPIKPACSDSARALNTKTI
        Y EIV  ERKN   QMENT SCPR +NVNLKNLPPI+NP +GN NH SIPAKFEKSRYI RVPQFMPPN+  ++RPNEY G+P+ PAC DSAR+ N +T 
Subjt:  YTEIVEAERKNLGKQMENTRSCPRRLNVNLKNLPPINNPRIGNENHPSIPAKFEKSRYIRRVPQFMPPNYRSEIRPNEYSGLPIKPACSDSARALNTKTI

Query:  PEAPSDSFVEKKDNCKEITSRCCCCRHGSTKEGTSEKISAKSLLFEICTANHWQPPLFECCEEEGPSHAKKYKFKVTVEMKGACGTILECYGNPQTRKKV
        P+       E+K+N  +  SR   C H STKE    K SAKSLL+EICTANHW+PPLFECCEEEGPSHAKKY FKV VEMKG CG  LECYG PQTRKKV
Subjt:  PEAPSDSFVEKKDNCKEITSRCCCCRHGSTKEGTSEKISAKSLLFEICTANHWQPPLFECCEEEGPSHAKKYKFKVTVEMKGACGTILECYGNPQTRKKV

Query:  AAEHAAEGALWYLKHLGY
        AAE AAEGA+WYLKHLGY
Subjt:  AAEHAAEGALWYLKHLGY

A0A6J1GW48 ribonuclease 3-like protein 1 isoform X14.4e-8471.56Show/hide
Query:  YTEIVEAERKNLGKQMENTRSCPRRLNVNLKNLPPINNPRIGNENHPSIPAKFEKSRYIRRVPQFMPPNYRSEIRPNEYSGLPIKPACSDSARALNTKTI
        Y EIV  ERKN   QMENT SCPR +NVNLKNLPPI+NP +GN NH SIPAKFEKSRYI RVPQFMPPN+  ++RPNEY G+P+ PAC DSAR+ N +T 
Subjt:  YTEIVEAERKNLGKQMENTRSCPRRLNVNLKNLPPINNPRIGNENHPSIPAKFEKSRYIRRVPQFMPPNYRSEIRPNEYSGLPIKPACSDSARALNTKTI

Query:  PEAPSDSFVEKKDNCKEITSRCCCCRHGSTKEGTSEKISAKSLLFEICTANHWQPPLFECCEEEGPSHAKKYKFKVTVEMKGACGTILECYGNPQTRKKV
        P+       E+K+N  +  SR   C H STKEGTS K SAKSLL+EICTANHW+PPLFECCEEEGPSHAKKY FKV VEMKG CG  LECYG PQTRKKV
Subjt:  PEAPSDSFVEKKDNCKEITSRCCCCRHGSTKEGTSEKISAKSLLFEICTANHWQPPLFECCEEEGPSHAKKYKFKVTVEMKGACGTILECYGNPQTRKKV

Query:  AAEHAAEGALWYLKHLGY
        AAE AAEGA+WYLKHLGY
Subjt:  AAEHAAEGALWYLKHLGY

SwissProt top hitse value%identityAlignment
A7LFZ6 Endoribonuclease Dicer homolog 46.4e-2457.5Show/hide
Query:  SAKSLLFEICTANHWQPPLFECCEEEGPSHAKKYKFKVTVEMKGACGTILECYGNPQTRKKVAAEHAAEGALWYLKHLGY
        +A+S LFE+C AN+W+PP F+ C+EEGPSH +K+ +KV VE+KGA  T+LEC+ + + +KK A EHAA+GALW LK LG+
Subjt:  SAKSLLFEICTANHWQPPLFECCEEEGPSHAKKYKFKVTVEMKGACGTILECYGNPQTRKKVAAEHAAEGALWYLKHLGY

P84634 Dicer-like protein 41.6e-2254.55Show/hide
Query:  KEGTSEKISAKSLLFEICTANHWQPPLFECCEEEGPSHAKKYKFKVTVEMKGACGTILECYGNPQTRKKVAAEHAAEGALWYLKHLGY
        K G     +AKSLL E C AN W+PP FECCEEEGP H K + +KV +E++ A    LECYG  +  KK AAEHAA+ A+W LKH G+
Subjt:  KEGTSEKISAKSLLFEICTANHWQPPLFECCEEEGPSHAKKYKFKVTVEMKGACGTILECYGNPQTRKKVAAEHAAEGALWYLKHLGY

Q8LMR2 Endoribonuclease Dicer homolog 12.3e-0533.33Show/hide
Query:  RHGSTKEGTSEKISAKSLLFEICTANHWQPPLFECCEEEGPSHAKKYKFKVTVEMKGACGTILECYGNPQTRKKVAAEHAA
        R G  K G   ++  +  L +IC    W  P + C  E GP+HAK++ + V V      G   EC G P    K A + AA
Subjt:  RHGSTKEGTSEKISAKSLLFEICTANHWQPPLFECCEEEGPSHAKKYKFKVTVEMKGACGTILECYGNPQTRKKVAAEHAA

Q9FKF0 Ribonuclease 3-like protein 31.5e-0433.8Show/hide
Query:  EKISAKSLLFEICTANHWQPPLFECCEEEGPSHAKKYKFKVTVEMKGACGTILECYGNPQTRKKVAAEHAA
        E ++ +  L EICT N W  P+F   EE+GP +  K+   V +E+    GT     G+ +++KK A    A
Subjt:  EKISAKSLLFEICTANHWQPPLFECCEEEGPSHAKKYKFKVTVEMKGACGTILECYGNPQTRKKVAAEHAA

Q9M8N2 Ribonuclease 3-like protein 17.1e-2332.67Show/hide
Query:  TRSCPRRLNVNLKNLPPINNPRIGNENHPSIPAKFEKSRYIRRVPQFMPPNYRSEIRPN---EYSGLPIKPACSDSARALNTKTIPEAPSDSFVEKKDNC
        T+   R + ++LK++PP++   I     PS+    +    +         +++ E   N    +S + I P  + S  +L  K  P+   +     K   
Subjt:  TRSCPRRLNVNLKNLPPINNPRIGNENHPSIPAKFEKSRYIRRVPQFMPPNYRSEIRPN---EYSGLPIKPACSDSARALNTKTIPEAPSDSFVEKKDNC

Query:  KEITSRCCCCRHGSTKEGTSEKISAKSLLFEICTANHWQPPLFECCEEEGPSHAKKYKFKVTVEMKGACG-TILECYGNPQTRKKVAAEHAAEGALWYLK
        K+  S+        T+ G     SAKS+L E+C +  W+PP++ECC  +GP H + + +KV VE++ + G T+LEC+G+P+ +KK AAEHAAEGALWYL+
Subjt:  KEITSRCCCCRHGSTKEGTSEKISAKSLLFEICTANHWQPPLFECCEEEGPSHAKKYKFKVTVEMKGACG-TILECYGNPQTRKKVAAEHAAEGALWYLK

Query:  HL
        H+
Subjt:  HL

Arabidopsis top hitse value%identityAlignment
AT1G80650.1 RNAse THREE-like protein 15.0e-2432.67Show/hide
Query:  TRSCPRRLNVNLKNLPPINNPRIGNENHPSIPAKFEKSRYIRRVPQFMPPNYRSEIRPN---EYSGLPIKPACSDSARALNTKTIPEAPSDSFVEKKDNC
        T+   R + ++LK++PP++   I     PS+    +    +         +++ E   N    +S + I P  + S  +L  K  P+   +     K   
Subjt:  TRSCPRRLNVNLKNLPPINNPRIGNENHPSIPAKFEKSRYIRRVPQFMPPNYRSEIRPN---EYSGLPIKPACSDSARALNTKTIPEAPSDSFVEKKDNC

Query:  KEITSRCCCCRHGSTKEGTSEKISAKSLLFEICTANHWQPPLFECCEEEGPSHAKKYKFKVTVEMKGACG-TILECYGNPQTRKKVAAEHAAEGALWYLK
        K+  S+        T+ G     SAKS+L E+C +  W+PP++ECC  +GP H + + +KV VE++ + G T+LEC+G+P+ +KK AAEHAAEGALWYL+
Subjt:  KEITSRCCCCRHGSTKEGTSEKISAKSLLFEICTANHWQPPLFECCEEEGPSHAKKYKFKVTVEMKGACG-TILECYGNPQTRKKVAAEHAAEGALWYLK

Query:  HL
        H+
Subjt:  HL

AT4G00420.2 Double-stranded RNA-binding domain (DsRBD)-containing protein8.0e-2254.44Show/hide
Query:  TKEGTSEKISAKSLLFEICTANHWQPPLFECCEEEGPSHAKKYKFKVTVEMK-GACGTILECYGNPQTRKKVAAEHAAEGALWYLKHLGY
        T E  +++ SAKS L+ +C+  HW+ PL+E    EGP H K +  KVTVEMK  +  T+LEC+GNPQ +KK+AAE AAE ALWYLK++GY
Subjt:  TKEGTSEKISAKSLLFEICTANHWQPPLFECCEEEGPSHAKKYKFKVTVEMK-GACGTILECYGNPQTRKKVAAEHAAEGALWYLKHLGY

AT4G00420.3 Double-stranded RNA-binding domain (DsRBD)-containing protein8.0e-2254.44Show/hide
Query:  TKEGTSEKISAKSLLFEICTANHWQPPLFECCEEEGPSHAKKYKFKVTVEMK-GACGTILECYGNPQTRKKVAAEHAAEGALWYLKHLGY
        T E  +++ SAKS L+ +C+  HW+ PL+E    EGP H K +  KVTVEMK  +  T+LEC+GNPQ +KK+AAE AAE ALWYLK++GY
Subjt:  TKEGTSEKISAKSLLFEICTANHWQPPLFECCEEEGPSHAKKYKFKVTVEMK-GACGTILECYGNPQTRKKVAAEHAAEGALWYLKHLGY

AT5G20320.1 dicer-like 41.1e-2354.55Show/hide
Query:  KEGTSEKISAKSLLFEICTANHWQPPLFECCEEEGPSHAKKYKFKVTVEMKGACGTILECYGNPQTRKKVAAEHAAEGALWYLKHLGY
        K G     +AKSLL E C AN W+PP FECCEEEGP H K + +KV +E++ A    LECYG  +  KK AAEHAA+ A+W LKH G+
Subjt:  KEGTSEKISAKSLLFEICTANHWQPPLFECCEEEGPSHAKKYKFKVTVEMKGACGTILECYGNPQTRKKVAAEHAAEGALWYLKHLGY

AT5G20320.2 dicer-like 41.1e-2354.55Show/hide
Query:  KEGTSEKISAKSLLFEICTANHWQPPLFECCEEEGPSHAKKYKFKVTVEMKGACGTILECYGNPQTRKKVAAEHAAEGALWYLKHLGY
        K G     +AKSLL E C AN W+PP FECCEEEGP H K + +KV +E++ A    LECYG  +  KK AAEHAA+ A+W LKH G+
Subjt:  KEGTSEKISAKSLLFEICTANHWQPPLFECCEEEGPSHAKKYKFKVTVEMKGACGTILECYGNPQTRKKVAAEHAAEGALWYLKHLGY


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGACAGTACACAGAGATCGTCGAAGCAGAGCGGAAGAATTTAGGAAAGCAGATGGAGAACACTCGTTCCTGTCCTCGAAGATTGAATGTCAATCTCAAAAATCTTCC
TCCAATTAATAACCCGCGCATTGGAAATGAAAATCACCCCTCGATTCCGGCTAAATTTGAGAAATCAAGGTATATTAGGCGCGTTCCTCAGTTTATGCCGCCTAATTACC
GGTCGGAAATAAGGCCGAACGAATATTCTGGCTTGCCGATCAAACCAGCGTGTTCTGATTCCGCTCGAGCTCTGAATACGAAGACGATTCCAGAGGCTCCGTCGGATTCC
TTCGTTGAAAAGAAAGACAATTGCAAGGAAATAACTTCGAGGTGCTGTTGTTGCAGACATGGCTCGACCAAAGAAGGTACTTCAGAAAAGATATCGGCAAAGTCCCTTCT
GTTTGAGATATGCACTGCAAATCACTGGCAGCCTCCTCTGTTTGAATGCTGCGAGGAAGAAGGTCCAAGCCATGCAAAAAAGTACAAATTCAAGGTTACTGTTGAGATGA
AGGGAGCTTGTGGAACAATTTTGGAATGCTATGGAAACCCTCAAACAAGAAAGAAAGTAGCAGCAGAGCATGCAGCAGAAGGAGCATTATGGTACTTAAAGCATTTGGGA
TATTGTTTTAAACGATAA
mRNA sequenceShow/hide mRNA sequence
ATGAGACAGTACACAGAGATCGTCGAAGCAGAGCGGAAGAATTTAGGAAAGCAGATGGAGAACACTCGTTCCTGTCCTCGAAGATTGAATGTCAATCTCAAAAATCTTCC
TCCAATTAATAACCCGCGCATTGGAAATGAAAATCACCCCTCGATTCCGGCTAAATTTGAGAAATCAAGGTATATTAGGCGCGTTCCTCAGTTTATGCCGCCTAATTACC
GGTCGGAAATAAGGCCGAACGAATATTCTGGCTTGCCGATCAAACCAGCGTGTTCTGATTCCGCTCGAGCTCTGAATACGAAGACGATTCCAGAGGCTCCGTCGGATTCC
TTCGTTGAAAAGAAAGACAATTGCAAGGAAATAACTTCGAGGTGCTGTTGTTGCAGACATGGCTCGACCAAAGAAGGTACTTCAGAAAAGATATCGGCAAAGTCCCTTCT
GTTTGAGATATGCACTGCAAATCACTGGCAGCCTCCTCTGTTTGAATGCTGCGAGGAAGAAGGTCCAAGCCATGCAAAAAAGTACAAATTCAAGGTTACTGTTGAGATGA
AGGGAGCTTGTGGAACAATTTTGGAATGCTATGGAAACCCTCAAACAAGAAAGAAAGTAGCAGCAGAGCATGCAGCAGAAGGAGCATTATGGTACTTAAAGCATTTGGGA
TATTGTTTTAAACGATAA
Protein sequenceShow/hide protein sequence
MRQYTEIVEAERKNLGKQMENTRSCPRRLNVNLKNLPPINNPRIGNENHPSIPAKFEKSRYIRRVPQFMPPNYRSEIRPNEYSGLPIKPACSDSARALNTKTIPEAPSDS
FVEKKDNCKEITSRCCCCRHGSTKEGTSEKISAKSLLFEICTANHWQPPLFECCEEEGPSHAKKYKFKVTVEMKGACGTILECYGNPQTRKKVAAEHAAEGALWYLKHLG
YCFKR