; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

HG10002233 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10002233
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionPeptide deformylase
Genome locationChr11:4727250..4728884
RNA-Seq ExpressionHG10002233
SyntenyHG10002233
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0018206 - peptidyl-methionine modification (biological process)
GO:0031365 - N-terminal protein amino acid modification (biological process)
GO:0043686 - co-translational protein modification (biological process)
GO:0005739 - mitochondrion (cellular component)
GO:0009507 - chloroplast (cellular component)
GO:0042586 - peptide deformylase activity (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR023635 - Peptide deformylase
IPR036821 - Peptide deformylase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0044431.1 peptide deformylase 1A [Cucumis melo var. makuwa]5.2e-13078.78Show/hide
Query:  METIHRFSFRLFPISLAERCLKPSSPTPNFRKLIYRATSSLHNIPKFIPASKTYSSSSTSIAKAGWFLGLGEQKKLSLPTIVKAGDPVLHEPAREVDPKE
        ME IHRFSFRLFPISLAERC KPS   PNFRKLI+R  SS  NIPKFIPA KTYSSSSTSIAKAGWFLGLGEQKK+SLP+IVKAGDPVLHEPAREVDPKE
Subjt:  METIHRFSFRLFPISLAERCLKPSSPTPNFRKLIYRATSSLHNIPKFIPASKTYSSSSTSIAKAGWFLGLGEQKKLSLPTIVKAGDPVLHEPAREVDPKE

Query:  IGSEKIQKIIDDMVLAMRKAPGVGLAAPQIGIPLRIIVLEDTKEYISYAPKEEIKAQDRRPFDLLVIINPRLKSKSNKTALFFEGCLRSFPVKAVPEVIG
        IGSEKIQKIIDDMVL MRKAPGVGLAAPQIGIPLRIIVLEDTKEYISYAPKEEIKAQDRRPFDLLVIINP+LKSKSNKTALFFEGCL             
Subjt:  IGSEKIQKIIDDMVLAMRKAPGVGLAAPQIGIPLRIIVLEDTKEYISYAPKEEIKAQDRRPFDLLVIINPRLKSKSNKTALFFEGCLRSFPVKAVPEVIG

Query:  EIAVVYLRISSSACVCSSMSSMIYSFILLPCSVDGFRAVVERYLDVEVTGLDRNGSPIKVDASGWQARILQHECDHLDGTLYVDKMVPRTFRAAENLSLP
                                       SVDGFRAVVERYLDVE+ G DRNG+PIKVDASGWQARILQHECDHLDGTLYVDKMVPRTFR AENL+LP
Subjt:  EIAVVYLRISSSACVCSSMSSMIYSFILLPCSVDGFRAVVERYLDVEVTGLDRNGSPIKVDASGWQARILQHECDHLDGTLYVDKMVPRTFRAAENLSLP

Query:  LAEGCPKLGAR
        LAEGCPKLG R
Subjt:  LAEGCPKLGAR

XP_004152208.2 peptide deformylase 1A, chloroplastic/mitochondrial [Cucumis sativus]1.1e-12777.49Show/hide
Query:  METIHRFSFRLFPISLAERCLKPSSPTPNFRKLIYRATSSLHNIPKFIPASKTYSSSSTSIAKAGWFLGLGEQKKLSLPTIVKAGDPVLHEPAREVDPKE
        ME IHRFSFRLFPISLAERC KPS   PNFRKLI+R  SS  NIPKFIP  KTYSSSSTSIAKAGWFLGLGEQKK+SLP+IVKAGDPVLHEPAREVDPKE
Subjt:  METIHRFSFRLFPISLAERCLKPSSPTPNFRKLIYRATSSLHNIPKFIPASKTYSSSSTSIAKAGWFLGLGEQKKLSLPTIVKAGDPVLHEPAREVDPKE

Query:  IGSEKIQKIIDDMVLAMRKAPGVGLAAPQIGIPLRIIVLEDTKEYISYAPKEEIKAQDRRPFDLLVIINPRLKSKSNKTALFFEGCLRSFPVKAVPEVIG
        IGSEK+QKIIDDM+L MRKAPGVGLAAPQIGIPLRIIVLEDTKEYISYAPKEEIKAQDRR FDLLVIINP+LKSKSNKTALFFEGCL             
Subjt:  IGSEKIQKIIDDMVLAMRKAPGVGLAAPQIGIPLRIIVLEDTKEYISYAPKEEIKAQDRRPFDLLVIINPRLKSKSNKTALFFEGCLRSFPVKAVPEVIG

Query:  EIAVVYLRISSSACVCSSMSSMIYSFILLPCSVDGFRAVVERYLDVEVTGLDRNGSPIKVDASGWQARILQHECDHLDGTLYVDKMVPRTFRAAENLSLP
                                       SVDGFRAVVERYLDVEV G DR+G+PIKVDASGWQARILQHECDHLDGTLYVDKMVPRTFR  ENL+LP
Subjt:  EIAVVYLRISSSACVCSSMSSMIYSFILLPCSVDGFRAVVERYLDVEVTGLDRNGSPIKVDASGWQARILQHECDHLDGTLYVDKMVPRTFRAAENLSLP

Query:  LAEGCPKLGAR
        LAEGCPKLGAR
Subjt:  LAEGCPKLGAR

XP_008454248.1 PREDICTED: LOW QUALITY PROTEIN: peptide deformylase 1A, chloroplastic/mitochondrial [Cucumis melo]5.2e-13078.78Show/hide
Query:  METIHRFSFRLFPISLAERCLKPSSPTPNFRKLIYRATSSLHNIPKFIPASKTYSSSSTSIAKAGWFLGLGEQKKLSLPTIVKAGDPVLHEPAREVDPKE
        ME IHRFSFRLFPISLAERC KPS   PNFRKLI+R  SS  NIPKFIPA KTYSSSSTSIAKAGWFLGLGEQKK+SLP+IVKAGDPVLHEPAREVDPKE
Subjt:  METIHRFSFRLFPISLAERCLKPSSPTPNFRKLIYRATSSLHNIPKFIPASKTYSSSSTSIAKAGWFLGLGEQKKLSLPTIVKAGDPVLHEPAREVDPKE

Query:  IGSEKIQKIIDDMVLAMRKAPGVGLAAPQIGIPLRIIVLEDTKEYISYAPKEEIKAQDRRPFDLLVIINPRLKSKSNKTALFFEGCLRSFPVKAVPEVIG
        IGSEKIQKIIDDMVL MRKAPGVGLAAPQIGIPLRIIVLEDTKEYISYAPKEEIKAQDRRPFDLLVIINP+LKSKSNKTALFFEGCL             
Subjt:  IGSEKIQKIIDDMVLAMRKAPGVGLAAPQIGIPLRIIVLEDTKEYISYAPKEEIKAQDRRPFDLLVIINPRLKSKSNKTALFFEGCLRSFPVKAVPEVIG

Query:  EIAVVYLRISSSACVCSSMSSMIYSFILLPCSVDGFRAVVERYLDVEVTGLDRNGSPIKVDASGWQARILQHECDHLDGTLYVDKMVPRTFRAAENLSLP
                                       SVDGFRAVVERYLDVE+ G DRNG+PIKVDASGWQARILQHECDHLDGTLYVDKMVPRTFR AENL+LP
Subjt:  EIAVVYLRISSSACVCSSMSSMIYSFILLPCSVDGFRAVVERYLDVEVTGLDRNGSPIKVDASGWQARILQHECDHLDGTLYVDKMVPRTFRAAENLSLP

Query:  LAEGCPKLGAR
        LAEGCPKLG R
Subjt:  LAEGCPKLGAR

XP_022153571.1 peptide deformylase 1A, chloroplastic/mitochondrial [Momordica charantia]8.6e-12576.04Show/hide
Query:  METIHRFSFRLFPISLAERCLKPSSPTPNFRKLIYRATSS--LHNIPKFIPASKTYSSSSTSIAKAGWFLGLGEQKKLSLPTIVKAGDPVLHEPAREVDP
        M+TIHRFSFRLFPISLA  CL PSS TP F KL +R TSS     IPKF+P  +TYSSSSTSIAKAGWFLGLGEQKK+SLPTIVKAGDPVLHEPAREVDP
Subjt:  METIHRFSFRLFPISLAERCLKPSSPTPNFRKLIYRATSS--LHNIPKFIPASKTYSSSSTSIAKAGWFLGLGEQKKLSLPTIVKAGDPVLHEPAREVDP

Query:  KEIGSEKIQKIIDDMVLAMRKAPGVGLAAPQIGIPLRIIVLEDTKEYISYAPKEEIKAQDRRPFDLLVIINPRLKSKSNKTALFFEGCLRSFPVKAVPEV
        KEIGSEKIQKIIDDMVLAMRKAPGVGLAAPQIGIPLRIIVLEDT+EYISYAPKEEIKAQDRRPFDLLVI+NP+LK KSNKTALFFEGCL           
Subjt:  KEIGSEKIQKIIDDMVLAMRKAPGVGLAAPQIGIPLRIIVLEDTKEYISYAPKEEIKAQDRRPFDLLVIINPRLKSKSNKTALFFEGCLRSFPVKAVPEV

Query:  IGEIAVVYLRISSSACVCSSMSSMIYSFILLPCSVDGFRAVVERYLDVEVTGLDRNGSPIKVDASGWQARILQHECDHLDGTLYVDKMVPRTFRAAENLS
                                         SVDGFRAVVER+LDVEV GLDR+G+PIKVDASGWQARILQHECDHLDGTLYVDKM+PRTFR AENL+
Subjt:  IGEIAVVYLRISSSACVCSSMSSMIYSFILLPCSVDGFRAVVERYLDVEVTGLDRNGSPIKVDASGWQARILQHECDHLDGTLYVDKMVPRTFRAAENLS

Query:  LPLAEGCPKLGAR
        LPLAEGCPKLGAR
Subjt:  LPLAEGCPKLGAR

XP_038878019.1 peptide deformylase 1A, chloroplastic/mitochondrial [Benincasa hispida]1.1e-13279.42Show/hide
Query:  METIHRFSFRLFPISLAERCLKPSSPTPNFRKLIYRATSSLHNIPKFIPASKTYSSSSTSIAKAGWFLGLGEQKKLSLPTIVKAGDPVLHEPAREVDPKE
        METIHRFSFRLFPISLAERCLKPSSPTPNFR  IYRA SS HNIPKFIP  KTY SSSTSIAKAGWFLGLGE+KK+ LPTIVKAGDPVLHEPAREVDPKE
Subjt:  METIHRFSFRLFPISLAERCLKPSSPTPNFRKLIYRATSSLHNIPKFIPASKTYSSSSTSIAKAGWFLGLGEQKKLSLPTIVKAGDPVLHEPAREVDPKE

Query:  IGSEKIQKIIDDMVLAMRKAPGVGLAAPQIGIPLRIIVLEDTKEYISYAPKEEIKAQDRRPFDLLVIINPRLKSKSNKTALFFEGCLRSFPVKAVPEVIG
        IGSEKIQKIID+MVLAMRKAPG+GLAAPQIGIPLRIIVLEDTKEYISYAPKEEIKAQDRRPFDLLVIINP+LKSKSNKTALFFEGC+             
Subjt:  IGSEKIQKIIDDMVLAMRKAPGVGLAAPQIGIPLRIIVLEDTKEYISYAPKEEIKAQDRRPFDLLVIINPRLKSKSNKTALFFEGCLRSFPVKAVPEVIG

Query:  EIAVVYLRISSSACVCSSMSSMIYSFILLPCSVDGFRAVVERYLDVEVTGLDRNGSPIKVDASGWQARILQHECDHLDGTLYVDKMVPRTFRAAENLSLP
                                       SVDGFRAVVERYL+VEV G DR+GSPIKVDASGWQARILQHECDHLDGTLYVDKMVPRTFR AENL+LP
Subjt:  EIAVVYLRISSSACVCSSMSSMIYSFILLPCSVDGFRAVVERYLDVEVTGLDRNGSPIKVDASGWQARILQHECDHLDGTLYVDKMVPRTFRAAENLSLP

Query:  LAEGCPKLGAR
        LAEGCPKLGAR
Subjt:  LAEGCPKLGAR

TrEMBL top hitse value%identityAlignment
A0A0A0KWR7 Peptide deformylase5.2e-12877.49Show/hide
Query:  METIHRFSFRLFPISLAERCLKPSSPTPNFRKLIYRATSSLHNIPKFIPASKTYSSSSTSIAKAGWFLGLGEQKKLSLPTIVKAGDPVLHEPAREVDPKE
        ME IHRFSFRLFPISLAERC KPS   PNFRKLI+R  SS  NIPKFIP  KTYSSSSTSIAKAGWFLGLGEQKK+SLP+IVKAGDPVLHEPAREVDPKE
Subjt:  METIHRFSFRLFPISLAERCLKPSSPTPNFRKLIYRATSSLHNIPKFIPASKTYSSSSTSIAKAGWFLGLGEQKKLSLPTIVKAGDPVLHEPAREVDPKE

Query:  IGSEKIQKIIDDMVLAMRKAPGVGLAAPQIGIPLRIIVLEDTKEYISYAPKEEIKAQDRRPFDLLVIINPRLKSKSNKTALFFEGCLRSFPVKAVPEVIG
        IGSEK+QKIIDDM+L MRKAPGVGLAAPQIGIPLRIIVLEDTKEYISYAPKEEIKAQDRR FDLLVIINP+LKSKSNKTALFFEGCL             
Subjt:  IGSEKIQKIIDDMVLAMRKAPGVGLAAPQIGIPLRIIVLEDTKEYISYAPKEEIKAQDRRPFDLLVIINPRLKSKSNKTALFFEGCLRSFPVKAVPEVIG

Query:  EIAVVYLRISSSACVCSSMSSMIYSFILLPCSVDGFRAVVERYLDVEVTGLDRNGSPIKVDASGWQARILQHECDHLDGTLYVDKMVPRTFRAAENLSLP
                                       SVDGFRAVVERYLDVEV G DR+G+PIKVDASGWQARILQHECDHLDGTLYVDKMVPRTFR  ENL+LP
Subjt:  EIAVVYLRISSSACVCSSMSSMIYSFILLPCSVDGFRAVVERYLDVEVTGLDRNGSPIKVDASGWQARILQHECDHLDGTLYVDKMVPRTFRAAENLSLP

Query:  LAEGCPKLGAR
        LAEGCPKLGAR
Subjt:  LAEGCPKLGAR

A0A1S3BY63 Peptide deformylase2.5e-13078.78Show/hide
Query:  METIHRFSFRLFPISLAERCLKPSSPTPNFRKLIYRATSSLHNIPKFIPASKTYSSSSTSIAKAGWFLGLGEQKKLSLPTIVKAGDPVLHEPAREVDPKE
        ME IHRFSFRLFPISLAERC KPS   PNFRKLI+R  SS  NIPKFIPA KTYSSSSTSIAKAGWFLGLGEQKK+SLP+IVKAGDPVLHEPAREVDPKE
Subjt:  METIHRFSFRLFPISLAERCLKPSSPTPNFRKLIYRATSSLHNIPKFIPASKTYSSSSTSIAKAGWFLGLGEQKKLSLPTIVKAGDPVLHEPAREVDPKE

Query:  IGSEKIQKIIDDMVLAMRKAPGVGLAAPQIGIPLRIIVLEDTKEYISYAPKEEIKAQDRRPFDLLVIINPRLKSKSNKTALFFEGCLRSFPVKAVPEVIG
        IGSEKIQKIIDDMVL MRKAPGVGLAAPQIGIPLRIIVLEDTKEYISYAPKEEIKAQDRRPFDLLVIINP+LKSKSNKTALFFEGCL             
Subjt:  IGSEKIQKIIDDMVLAMRKAPGVGLAAPQIGIPLRIIVLEDTKEYISYAPKEEIKAQDRRPFDLLVIINPRLKSKSNKTALFFEGCLRSFPVKAVPEVIG

Query:  EIAVVYLRISSSACVCSSMSSMIYSFILLPCSVDGFRAVVERYLDVEVTGLDRNGSPIKVDASGWQARILQHECDHLDGTLYVDKMVPRTFRAAENLSLP
                                       SVDGFRAVVERYLDVE+ G DRNG+PIKVDASGWQARILQHECDHLDGTLYVDKMVPRTFR AENL+LP
Subjt:  EIAVVYLRISSSACVCSSMSSMIYSFILLPCSVDGFRAVVERYLDVEVTGLDRNGSPIKVDASGWQARILQHECDHLDGTLYVDKMVPRTFRAAENLSLP

Query:  LAEGCPKLGAR
        LAEGCPKLG R
Subjt:  LAEGCPKLGAR

A0A5D3E1C7 Peptide deformylase2.5e-13078.78Show/hide
Query:  METIHRFSFRLFPISLAERCLKPSSPTPNFRKLIYRATSSLHNIPKFIPASKTYSSSSTSIAKAGWFLGLGEQKKLSLPTIVKAGDPVLHEPAREVDPKE
        ME IHRFSFRLFPISLAERC KPS   PNFRKLI+R  SS  NIPKFIPA KTYSSSSTSIAKAGWFLGLGEQKK+SLP+IVKAGDPVLHEPAREVDPKE
Subjt:  METIHRFSFRLFPISLAERCLKPSSPTPNFRKLIYRATSSLHNIPKFIPASKTYSSSSTSIAKAGWFLGLGEQKKLSLPTIVKAGDPVLHEPAREVDPKE

Query:  IGSEKIQKIIDDMVLAMRKAPGVGLAAPQIGIPLRIIVLEDTKEYISYAPKEEIKAQDRRPFDLLVIINPRLKSKSNKTALFFEGCLRSFPVKAVPEVIG
        IGSEKIQKIIDDMVL MRKAPGVGLAAPQIGIPLRIIVLEDTKEYISYAPKEEIKAQDRRPFDLLVIINP+LKSKSNKTALFFEGCL             
Subjt:  IGSEKIQKIIDDMVLAMRKAPGVGLAAPQIGIPLRIIVLEDTKEYISYAPKEEIKAQDRRPFDLLVIINPRLKSKSNKTALFFEGCLRSFPVKAVPEVIG

Query:  EIAVVYLRISSSACVCSSMSSMIYSFILLPCSVDGFRAVVERYLDVEVTGLDRNGSPIKVDASGWQARILQHECDHLDGTLYVDKMVPRTFRAAENLSLP
                                       SVDGFRAVVERYLDVE+ G DRNG+PIKVDASGWQARILQHECDHLDGTLYVDKMVPRTFR AENL+LP
Subjt:  EIAVVYLRISSSACVCSSMSSMIYSFILLPCSVDGFRAVVERYLDVEVTGLDRNGSPIKVDASGWQARILQHECDHLDGTLYVDKMVPRTFRAAENLSLP

Query:  LAEGCPKLGAR
        LAEGCPKLG R
Subjt:  LAEGCPKLGAR

A0A6J1DL13 Peptide deformylase4.1e-12576.04Show/hide
Query:  METIHRFSFRLFPISLAERCLKPSSPTPNFRKLIYRATSS--LHNIPKFIPASKTYSSSSTSIAKAGWFLGLGEQKKLSLPTIVKAGDPVLHEPAREVDP
        M+TIHRFSFRLFPISLA  CL PSS TP F KL +R TSS     IPKF+P  +TYSSSSTSIAKAGWFLGLGEQKK+SLPTIVKAGDPVLHEPAREVDP
Subjt:  METIHRFSFRLFPISLAERCLKPSSPTPNFRKLIYRATSS--LHNIPKFIPASKTYSSSSTSIAKAGWFLGLGEQKKLSLPTIVKAGDPVLHEPAREVDP

Query:  KEIGSEKIQKIIDDMVLAMRKAPGVGLAAPQIGIPLRIIVLEDTKEYISYAPKEEIKAQDRRPFDLLVIINPRLKSKSNKTALFFEGCLRSFPVKAVPEV
        KEIGSEKIQKIIDDMVLAMRKAPGVGLAAPQIGIPLRIIVLEDT+EYISYAPKEEIKAQDRRPFDLLVI+NP+LK KSNKTALFFEGCL           
Subjt:  KEIGSEKIQKIIDDMVLAMRKAPGVGLAAPQIGIPLRIIVLEDTKEYISYAPKEEIKAQDRRPFDLLVIINPRLKSKSNKTALFFEGCLRSFPVKAVPEV

Query:  IGEIAVVYLRISSSACVCSSMSSMIYSFILLPCSVDGFRAVVERYLDVEVTGLDRNGSPIKVDASGWQARILQHECDHLDGTLYVDKMVPRTFRAAENLS
                                         SVDGFRAVVER+LDVEV GLDR+G+PIKVDASGWQARILQHECDHLDGTLYVDKM+PRTFR AENL+
Subjt:  IGEIAVVYLRISSSACVCSSMSSMIYSFILLPCSVDGFRAVVERYLDVEVTGLDRNGSPIKVDASGWQARILQHECDHLDGTLYVDKMVPRTFRAAENLS

Query:  LPLAEGCPKLGAR
        LPLAEGCPKLGAR
Subjt:  LPLAEGCPKLGAR

A0A6J1G8Z1 Peptide deformylase1.1e-12073.95Show/hide
Query:  METIHRFSFRLFPISLAERCLKPSSPTPNFRKLIYRATSSLHNIPKFIPASKTYSSSSTSIAKAGWFLGLGEQKKLSLPTIVKAGDPVLHEPAREVDPKE
        MET+HRFSFRL P SLAERCLKPSS TP FR LI   TSS ++IPKFIPA K+YSSS + IAKAGWFLGLG++ K SLP IV AGDPVLHEPAREVDPKE
Subjt:  METIHRFSFRLFPISLAERCLKPSSPTPNFRKLIYRATSSLHNIPKFIPASKTYSSSSTSIAKAGWFLGLGEQKKLSLPTIVKAGDPVLHEPAREVDPKE

Query:  IGSEKIQKIIDDMVLAMRKAPGVGLAAPQIGIPLRIIVLEDTKEYISYAPKEEIKAQDRRPFDLLVIINPRLKSKSNKTALFFEGCLRSFPVKAVPEVIG
        IGS+KIQKIIDDMV+AMR APGVGLAA QIGIPLRIIVLEDTKEYISYAPKEEIKAQDRRPFDLLVIINP+LKSKSNKTALFFEGCL             
Subjt:  IGSEKIQKIIDDMVLAMRKAPGVGLAAPQIGIPLRIIVLEDTKEYISYAPKEEIKAQDRRPFDLLVIINPRLKSKSNKTALFFEGCLRSFPVKAVPEVIG

Query:  EIAVVYLRISSSACVCSSMSSMIYSFILLPCSVDGFRAVVERYLDVEVTGLDRNGSPIKVDASGWQARILQHECDHLDGTLYVDKMVPRTFRAAENLSLP
                                       SVDGFRAVVER+LDVEV GLDR GS IKVDASGWQARILQHECDHL+GTLYVDKMVPRTFR AENL+LP
Subjt:  EIAVVYLRISSSACVCSSMSSMIYSFILLPCSVDGFRAVVERYLDVEVTGLDRNGSPIKVDASGWQARILQHECDHLDGTLYVDKMVPRTFRAAENLSLP

Query:  LAEGCPKLGAR
        LAEGCP+LG R
Subjt:  LAEGCPKLGAR

SwissProt top hitse value%identityAlignment
B6RGY0 Peptide deformylase 1A, chloroplastic2.1e-8153.72Show/hide
Query:  LFPISLAERCLKPSSPTPNFRKLIYRATSSLHNIPKFIPASKTYSSSSTSIAKAGWFLGL-------GEQKKLSL-PTIVKAGDPVLHEPAREVDPKEIG
        L P+S A   L P++P P         T+   +  +  P  + +SS   S    GW  GL       G    +++ P  VKAGDPVLHEPA++V P +I 
Subjt:  LFPISLAERCLKPSSPTPNFRKLIYRATSSLHNIPKFIPASKTYSSSSTSIAKAGWFLGL-------GEQKKLSL-PTIVKAGDPVLHEPAREVDPKEIG

Query:  SEKIQKIIDDMVLAMRKAPGVGLAAPQIGIPLRIIVLEDTKEYISYAPKEEIKAQDRRPFDLLVIINPRLKSKSNKTALFFEGCLRSFPVKAVPEVIGEI
        SEK+Q +ID MV  MRKAPGVGLAAPQIG+PL+IIVLEDT+EYISYAPK++I+AQDRRPFDLLVIINP+LK+ S +TALFFEGCL               
Subjt:  SEKIQKIIDDMVLAMRKAPGVGLAAPQIGIPLRIIVLEDTKEYISYAPKEEIKAQDRRPFDLLVIINPRLKSKSNKTALFFEGCLRSFPVKAVPEVIGEI

Query:  AVVYLRISSSACVCSSMSSMIYSFILLPCSVDGFRAVVERYLDVEVTGLDRNGSPIKVDASGWQARILQHECDHLDGTLYVDKMVPRTFRAAENLSLPLA
                                     SVDG+RA+VER+LDVEV+GLDRNG PIKV+ASGWQARILQHECDHL+GTLYVD MVPRTFR  +NL LPL 
Subjt:  AVVYLRISSSACVCSSMSSMIYSFILLPCSVDGFRAVVERYLDVEVTGLDRNGSPIKVDASGWQARILQHECDHLDGTLYVDKMVPRTFRAAENLSLPLA

Query:  EGCPKLGAR
         GCP +GAR
Subjt:  EGCPKLGAR

Q7NJV3 Peptide deformylase 11.2e-3337.96Show/hide
Query:  IVKAGDPVLHEPAREVDPKEIGSEKIQKIIDDMVLAMRKAPGVGLAAPQIGIPLRIIVLEDTKEYISYAPKEEIKAQDRRPFDLLVIINPRLKSKSNKTA
        IVK GDPVL   A+ ++  EI SE IQ++I  M   MR+APGVGLAAPQ+G+ ++++V+ED  EYI      E + ++R P    V+INP L  +  ++A
Subjt:  IVKAGDPVLHEPAREVDPKEIGSEKIQKIIDDMVLAMRKAPGVGLAAPQIGIPLRIIVLEDTKEYISYAPKEEIKAQDRRPFDLLVIINPRLKSKSNKTA

Query:  LFFEGCLRSFPVKAVPEVIGEIAVVYLRISSSACVCSSMSSMIYSFILLPCSVDGFRAVVERYLDVEVTGLDRNGSPIKVDASGWQARILQHECDHLDGT
        +FFEGCL                                            S+ G++ +V R   V V  LD   +P+ + A GW ARILQHE DHL+G 
Subjt:  LFFEGCLRSFPVKAVPEVIGEIAVVYLRISSSACVCSSMSSMIYSFILLPCSVDGFRAVVERYLDVEVTGLDRNGSPIKVDASGWQARILQHECDHLDGT

Query:  LYVDKMVPRTFRAAEN
        L VD+M  +TF   EN
Subjt:  LYVDKMVPRTFRAAEN

Q825U9 Peptide deformylase 38.6e-2733.48Show/hide
Query:  IVKAGDPVLHEPAREVDPKEIGSEKIQKIIDDMVLAMRKAPGVGLAAPQIGIPLRIIVLEDTKEYISYAPKEEIKAQDRRPFDLLVIINPRLKSKSNKTA
        IV AGDPVL   A   D  ++G   + + ++ + L M  APGVGLAAPQ+G+ LRI V+ED     +  P+E    + R P    V++NP  ++  +  A
Subjt:  IVKAGDPVLHEPAREVDPKEIGSEKIQKIIDDMVLAMRKAPGVGLAAPQIGIPLRIIVLEDTKEYISYAPKEEIKAQDRRPFDLLVIINPRLKSKSNKTA

Query:  LFFEGCLRSFPVKAVPEVIGEIAVVYLRISSSACVCSSMSSMIYSFILLPCSVDGFRAVVERYLDVEVTGLDRNGSPIKVDASGWQARILQHECDHLDGT
         FFEGCL                                            SV G++AVV R   V +T LD +G  +  + +GW ARI+QHE DHLDG 
Subjt:  LFFEGCLRSFPVKAVPEVIGEIAVVYLRISSSACVCSSMSSMIYSFILLPCSVDGFRAVVERYLDVEVTGLDRNGSPIKVDASGWQARILQHECDHLDGT

Query:  LYVDKMVPRTFRAAENLSLPLAEGCPKLGA
        LY+D+   R+  + E ++L  ++  P+  A
Subjt:  LYVDKMVPRTFRAAENLSLPLAEGCPKLGA

Q9FUZ0 Peptide deformylase 1A, chloroplastic2.7e-8965.77Show/hide
Query:  ASKTYSSSSTSIAKAGWFLGLGEQKKLSLPTIVKAGDPVLHEPAREVDPKEIGSEKIQKIIDDMVLAMRKAPGVGLAAPQIGIPLRIIVLEDTKEYISYA
        + K YSS++   A+AGWFLGLGE+KK ++P IVKAGDPVLHEP++++  +EIGSE+IQKII++MV  MR APGVGLAAPQIGIPL+IIVLEDT EYISYA
Subjt:  ASKTYSSSSTSIAKAGWFLGLGEQKKLSLPTIVKAGDPVLHEPAREVDPKEIGSEKIQKIIDDMVLAMRKAPGVGLAAPQIGIPLRIIVLEDTKEYISYA

Query:  PKEEIKAQDRRPFDLLVIINPRLKSKSNKTALFFEGCLRSFPVKAVPEVIGEIAVVYLRISSSACVCSSMSSMIYSFILLPCSVDGFRAVVERYLDVEVT
        PK+E KAQDRRPF LLVIINP+LK K NKTALFFEGCL                                            SVDGFRAVVER+L+VEVT
Subjt:  PKEEIKAQDRRPFDLLVIINPRLKSKSNKTALFFEGCLRSFPVKAVPEVIGEIAVVYLRISSSACVCSSMSSMIYSFILLPCSVDGFRAVVERYLDVEVT

Query:  GLDRNGSPIKVDASGWQARILQHECDHLDGTLYVDKMVPRTFRAAENLSLPLAEGCPKLG
        GLDRNG  IKVDASGWQARILQHE DHLDGTLYVDKM PRTFR  ENL LPLA GCPKLG
Subjt:  GLDRNGSPIKVDASGWQARILQHECDHLDGTLYVDKMVPRTFRAAENLSLPLAEGCPKLG

Q9FV53 Peptide deformylase 1A, chloroplastic/mitochondrial3.8e-9159.62Show/hide
Query:  METIHRFSFRLFPISLAERCLKPSSPT--PNFRKLIYRATSSLHNIPKFIPASKTYSSSSTSIAKAGWFLGLGE-QKKLSLPTIVKAGDPVLHEPAREVD
        MET+ R S RL P+S A  C     P   P    L+ R    L+N+P         SSSS+   KAGW LGLGE +KK+ LP IV +GDPVLHE AREVD
Subjt:  METIHRFSFRLFPISLAERCLKPSSPT--PNFRKLIYRATSSLHNIPKFIPASKTYSSSSTSIAKAGWFLGLGE-QKKLSLPTIVKAGDPVLHEPAREVD

Query:  PKEIGSEKIQKIIDDMVLAMRKAPGVGLAAPQIGIPLRIIVLEDTKEYISYAPKEEIKAQDRRPFDLLVIINPRLKSKSNKTALFFEGCLRSFPVKAVPE
        P EIGSE+IQKIIDDM+  MR APGVGLAAPQIG+PLRIIVLEDTKEYISYAPKEEI AQ+RR FDL+V++NP LK +SNK ALFFEGCL          
Subjt:  PKEIGSEKIQKIIDDMVLAMRKAPGVGLAAPQIGIPLRIIVLEDTKEYISYAPKEEIKAQDRRPFDLLVIINPRLKSKSNKTALFFEGCLRSFPVKAVPE

Query:  VIGEIAVVYLRISSSACVCSSMSSMIYSFILLPCSVDGFRAVVERYLDVEVTGLDRNGSPIKVDASGWQARILQHECDHLDGTLYVDKMVPRTFRAAENL
                                          SVDGFRA VERYL+V VTG DR G  I+V+ASGWQARILQHECDHLDG LYVDKMVPRTFR  +NL
Subjt:  VIGEIAVVYLRISSSACVCSSMSSMIYSFILLPCSVDGFRAVVERYLDVEVTGLDRNGSPIKVDASGWQARILQHECDHLDGTLYVDKMVPRTFRAAENL

Query:  SLPLAEGCPKLG
         LPLAEGCPKLG
Subjt:  SLPLAEGCPKLG

Arabidopsis top hitse value%identityAlignment
AT1G15390.1 peptide deformylase 1A2.7e-9259.62Show/hide
Query:  METIHRFSFRLFPISLAERCLKPSSPT--PNFRKLIYRATSSLHNIPKFIPASKTYSSSSTSIAKAGWFLGLGE-QKKLSLPTIVKAGDPVLHEPAREVD
        MET+ R S RL P+S A  C     P   P    L+ R    L+N+P         SSSS+   KAGW LGLGE +KK+ LP IV +GDPVLHE AREVD
Subjt:  METIHRFSFRLFPISLAERCLKPSSPT--PNFRKLIYRATSSLHNIPKFIPASKTYSSSSTSIAKAGWFLGLGE-QKKLSLPTIVKAGDPVLHEPAREVD

Query:  PKEIGSEKIQKIIDDMVLAMRKAPGVGLAAPQIGIPLRIIVLEDTKEYISYAPKEEIKAQDRRPFDLLVIINPRLKSKSNKTALFFEGCLRSFPVKAVPE
        P EIGSE+IQKIIDDM+  MR APGVGLAAPQIG+PLRIIVLEDTKEYISYAPKEEI AQ+RR FDL+V++NP LK +SNK ALFFEGCL          
Subjt:  PKEIGSEKIQKIIDDMVLAMRKAPGVGLAAPQIGIPLRIIVLEDTKEYISYAPKEEIKAQDRRPFDLLVIINPRLKSKSNKTALFFEGCLRSFPVKAVPE

Query:  VIGEIAVVYLRISSSACVCSSMSSMIYSFILLPCSVDGFRAVVERYLDVEVTGLDRNGSPIKVDASGWQARILQHECDHLDGTLYVDKMVPRTFRAAENL
                                          SVDGFRA VERYL+V VTG DR G  I+V+ASGWQARILQHECDHLDG LYVDKMVPRTFR  +NL
Subjt:  VIGEIAVVYLRISSSACVCSSMSSMIYSFILLPCSVDGFRAVVERYLDVEVTGLDRNGSPIKVDASGWQARILQHECDHLDGTLYVDKMVPRTFRAAENL

Query:  SLPLAEGCPKLG
         LPLAEGCPKLG
Subjt:  SLPLAEGCPKLG

AT5G14660.1 peptide deformylase 1B2.2e-1428.16Show/hide
Query:  IVKAGDPVLHEPAREVDPKEIGSEKIQKIIDDMVLAMRKAPGVGLAAPQIGIPLRIIVLEDTKEYISYAPKEEIKAQDRRPFDLLVIINPRLKSKSNKTA
        IV+  DP+L    + +D   I  E ++ ++D M   M K  G+GL+APQ+G+ ++++V     E     P E  +         +V++NP++K  S+K  
Subjt:  IVKAGDPVLHEPAREVDPKEIGSEKIQKIIDDMVLAMRKAPGVGLAAPQIGIPLRIIVLEDTKEYISYAPKEEIKAQDRRPFDLLVIINPRLKSKSNKTA

Query:  LFFEGCLRSFPVKAVPEVIGEIAVVYLRISSSACVCSSMSSMIYSFILLPCSVDGFRAVVERYLDVEVTGLDRNGSPIKVDASGWQARILQHECDHLDGT
         F EGCL SFP                                           G  A V R   V++   D  G    +  S   ARI QHE DHL+G 
Subjt:  LFFEGCLRSFPVKAVPEVIGEIAVVYLRISSSACVCSSMSSMIYSFILLPCSVDGFRAVVERYLDVEVTGLDRNGSPIKVDASGWQARILQHECDHLDGT

Query:  LYVDKM
        L+ D+M
Subjt:  LYVDKM

AT5G14660.2 peptide deformylase 1B2.2e-1428.16Show/hide
Query:  IVKAGDPVLHEPAREVDPKEIGSEKIQKIIDDMVLAMRKAPGVGLAAPQIGIPLRIIVLEDTKEYISYAPKEEIKAQDRRPFDLLVIINPRLKSKSNKTA
        IV+  DP+L    + +D   I  E ++ ++D M   M K  G+GL+APQ+G+ ++++V     E     P E  +         +V++NP++K  S+K  
Subjt:  IVKAGDPVLHEPAREVDPKEIGSEKIQKIIDDMVLAMRKAPGVGLAAPQIGIPLRIIVLEDTKEYISYAPKEEIKAQDRRPFDLLVIINPRLKSKSNKTA

Query:  LFFEGCLRSFPVKAVPEVIGEIAVVYLRISSSACVCSSMSSMIYSFILLPCSVDGFRAVVERYLDVEVTGLDRNGSPIKVDASGWQARILQHECDHLDGT
         F EGCL SFP                                           G  A V R   V++   D  G    +  S   ARI QHE DHL+G 
Subjt:  LFFEGCLRSFPVKAVPEVIGEIAVVYLRISSSACVCSSMSSMIYSFILLPCSVDGFRAVVERYLDVEVTGLDRNGSPIKVDASGWQARILQHECDHLDGT

Query:  LYVDKM
        L+ D+M
Subjt:  LYVDKM


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGACCATTCACCGATTCTCCTTCCGTCTCTTCCCAATCTCTCTTGCCGAAAGGTGTCTCAAGCCTTCTTCACCCACACCCAATTTTCGAAAACTCATTTACAGAGC
CACTTCTTCATTGCACAATATTCCAAAATTCATTCCGGCCTCAAAAACCTACAGTTCCTCTTCAACTTCAATTGCGAAAGCCGGTTGGTTTCTGGGTCTCGGAGAGCAGA
AGAAACTGAGCTTACCGACGATTGTGAAGGCCGGAGACCCAGTTTTGCACGAGCCTGCTCGTGAGGTTGATCCTAAGGAAATAGGGTCGGAGAAGATTCAGAAGATAATC
GACGATATGGTTCTAGCCATGAGAAAGGCTCCTGGAGTCGGTCTTGCAGCTCCCCAGATTGGAATTCCGTTAAGGATAATTGTTTTGGAAGACACTAAGGAATATATCAG
TTATGCACCCAAGGAGGAGATCAAAGCACAAGATAGGCGCCCTTTTGATCTTCTGGTGATCATAAACCCAAGGCTAAAAAGTAAAAGCAACAAGACTGCACTGTTTTTTG
AAGGGTGCCTAAGATCGTTTCCAGTTAAAGCTGTACCTGAAGTCATTGGTGAAATAGCTGTTGTTTACTTAAGGATTTCTTCCTCTGCTTGTGTGTGTTCTTCCATGTCA
TCCATGATTTATTCCTTTATTCTTTTACCTTGTAGTGTTGATGGATTTAGAGCAGTGGTGGAGCGCTATCTTGATGTTGAGGTAACCGGTCTCGATCGAAATGGGAGTCC
TATCAAGGTGGATGCTTCAGGTTGGCAGGCTCGAATCTTACAGCACGAATGTGATCATTTGGACGGAACTCTTTATGTCGACAAGATGGTGCCTCGAACATTCAGAGCAG
CTGAAAATTTATCTTTACCTCTTGCTGAGGGTTGCCCCAAGCTTGGAGCTCGATAA
mRNA sequenceShow/hide mRNA sequence
ATGGAGACCATTCACCGATTCTCCTTCCGTCTCTTCCCAATCTCTCTTGCCGAAAGGTGTCTCAAGCCTTCTTCACCCACACCCAATTTTCGAAAACTCATTTACAGAGC
CACTTCTTCATTGCACAATATTCCAAAATTCATTCCGGCCTCAAAAACCTACAGTTCCTCTTCAACTTCAATTGCGAAAGCCGGTTGGTTTCTGGGTCTCGGAGAGCAGA
AGAAACTGAGCTTACCGACGATTGTGAAGGCCGGAGACCCAGTTTTGCACGAGCCTGCTCGTGAGGTTGATCCTAAGGAAATAGGGTCGGAGAAGATTCAGAAGATAATC
GACGATATGGTTCTAGCCATGAGAAAGGCTCCTGGAGTCGGTCTTGCAGCTCCCCAGATTGGAATTCCGTTAAGGATAATTGTTTTGGAAGACACTAAGGAATATATCAG
TTATGCACCCAAGGAGGAGATCAAAGCACAAGATAGGCGCCCTTTTGATCTTCTGGTGATCATAAACCCAAGGCTAAAAAGTAAAAGCAACAAGACTGCACTGTTTTTTG
AAGGGTGCCTAAGATCGTTTCCAGTTAAAGCTGTACCTGAAGTCATTGGTGAAATAGCTGTTGTTTACTTAAGGATTTCTTCCTCTGCTTGTGTGTGTTCTTCCATGTCA
TCCATGATTTATTCCTTTATTCTTTTACCTTGTAGTGTTGATGGATTTAGAGCAGTGGTGGAGCGCTATCTTGATGTTGAGGTAACCGGTCTCGATCGAAATGGGAGTCC
TATCAAGGTGGATGCTTCAGGTTGGCAGGCTCGAATCTTACAGCACGAATGTGATCATTTGGACGGAACTCTTTATGTCGACAAGATGGTGCCTCGAACATTCAGAGCAG
CTGAAAATTTATCTTTACCTCTTGCTGAGGGTTGCCCCAAGCTTGGAGCTCGATAA
Protein sequenceShow/hide protein sequence
METIHRFSFRLFPISLAERCLKPSSPTPNFRKLIYRATSSLHNIPKFIPASKTYSSSSTSIAKAGWFLGLGEQKKLSLPTIVKAGDPVLHEPAREVDPKEIGSEKIQKII
DDMVLAMRKAPGVGLAAPQIGIPLRIIVLEDTKEYISYAPKEEIKAQDRRPFDLLVIINPRLKSKSNKTALFFEGCLRSFPVKAVPEVIGEIAVVYLRISSSACVCSSMS
SMIYSFILLPCSVDGFRAVVERYLDVEVTGLDRNGSPIKVDASGWQARILQHECDHLDGTLYVDKMVPRTFRAAENLSLPLAEGCPKLGAR