CuGenDBv2

Gene ID	HG10002280
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	Bet1-like SNARE 1-1
Genome location	Chr11:5115720..5117083
RNA-Seq Expression	HG10002280
Synteny	HG10002280
Gene Ontology terms	GO:0015031 - protein transport (biological process) GO:0030173 - integral component of Golgi membrane (cellular component)
InterPro domains	IPR000727 - Target SNARE coiled-coil homology domain IPR039897 - BET1-like protein IPR039899 - BET1, SNARE domain

Homology

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GenBank top hits

e value

%identity

Alignment

XP_004151397.1 bet1-like SNARE 1-2 [Cucumis sativus]

7.9e-28

97.06

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Query:  QREHRSSRSALFDDIEEGGLRTSSSVEIKEHDNDKALHTLEDRVSILKRLTGDIHEEVESHNHLLDRM
        +REHRSSRSALFDD+EEGGLRTSSSVEIKEHDNDKALHTLEDRVSILKRLTGDIHEEVESHNHLLDRM
Subjt:  QREHRSSRSALFDDIEEGGLRTSSSVEIKEHDNDKALHTLEDRVSILKRLTGDIHEEVESHNHLLDRM

XP_008447527.1 PREDICTED: bet1-like SNARE 1-2 [Cucumis melo]

7.9e-28

97.06

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Query:  QREHRSSRSALFDDIEEGGLRTSSSVEIKEHDNDKALHTLEDRVSILKRLTGDIHEEVESHNHLLDRM
        +REHRSSRSALFDD+EEGGLRTSSSVEIKEHDNDKALHTLEDRVSILKRLTGDIHEEVESHNHLLDRM
Subjt:  QREHRSSRSALFDDIEEGGLRTSSSVEIKEHDNDKALHTLEDRVSILKRLTGDIHEEVESHNHLLDRM

XP_038906833.1 bet1-like SNARE 1-2 isoform X1 [Benincasa hispida]

1.8e-27

91.67

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Query:  VFVQ-REHRSSRSALFDDIEEGGLRTSSSVEIKEHDNDKALHTLEDRVSILKRLTGDIHEEVESHNHLLDRM
        +FV  +EHRSSRSALFDD+EEGGLRTSSSVEIKEHDNDKALHTLEDR+SILKRLTGDIHEEVESHNHLLDRM
Subjt:  VFVQ-REHRSSRSALFDDIEEGGLRTSSSVEIKEHDNDKALHTLEDRVSILKRLTGDIHEEVESHNHLLDRM

XP_038906834.1 bet1-like SNARE 1-2 isoform X2 [Benincasa hispida]

1.0e-27

95.59

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Query:  QREHRSSRSALFDDIEEGGLRTSSSVEIKEHDNDKALHTLEDRVSILKRLTGDIHEEVESHNHLLDRM
        +REHRSSRSALFDD+EEGGLRTSSSVEIKEHDNDKALHTLEDR+SILKRLTGDIHEEVESHNHLLDRM
Subjt:  QREHRSSRSALFDDIEEGGLRTSSSVEIKEHDNDKALHTLEDRVSILKRLTGDIHEEVESHNHLLDRM

XP_038906835.1 bet1-like SNARE 1-2 isoform X3 [Benincasa hispida]

3.9e-27

96.97

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Query:  EHRSSRSALFDDIEEGGLRTSSSVEIKEHDNDKALHTLEDRVSILKRLTGDIHEEVESHNHLLDRM
        EHRSSRSALFDD+EEGGLRTSSSVEIKEHDNDKALHTLEDR+SILKRLTGDIHEEVESHNHLLDRM
Subjt:  EHRSSRSALFDDIEEGGLRTSSSVEIKEHDNDKALHTLEDRVSILKRLTGDIHEEVESHNHLLDRM

TrEMBL top hits

e value

%identity

Alignment

A0A0A0L808 t-SNARE coiled-coil homology domain-containing protein

3.8e-28

97.06

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Query:  QREHRSSRSALFDDIEEGGLRTSSSVEIKEHDNDKALHTLEDRVSILKRLTGDIHEEVESHNHLLDRM
        +REHRSSRSALFDD+EEGGLRTSSSVEIKEHDNDKALHTLEDRVSILKRLTGDIHEEVESHNHLLDRM
Subjt:  QREHRSSRSALFDDIEEGGLRTSSSVEIKEHDNDKALHTLEDRVSILKRLTGDIHEEVESHNHLLDRM

A0A1S3BHN2 bet1-like SNARE 1-2

3.8e-28

97.06

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Query:  QREHRSSRSALFDDIEEGGLRTSSSVEIKEHDNDKALHTLEDRVSILKRLTGDIHEEVESHNHLLDRM
        +REHRSSRSALFDD+EEGGLRTSSSVEIKEHDNDKALHTLEDRVSILKRLTGDIHEEVESHNHLLDRM
Subjt:  QREHRSSRSALFDDIEEGGLRTSSSVEIKEHDNDKALHTLEDRVSILKRLTGDIHEEVESHNHLLDRM

A0A6J1C943 bet1-like SNARE 1-2

7.2e-27

94.12

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Query:  QREHRSSRSALFDDIEEGGLRTSSSVEIKEHDNDKALHTLEDRVSILKRLTGDIHEEVESHNHLLDRM
        +REHRSSRSALFDD+EEGGLRTSSSVEIKEHDNDKALH+LEDRVSILKRLTGDIHEEVESHN+LLDRM
Subjt:  QREHRSSRSALFDDIEEGGLRTSSSVEIKEHDNDKALHTLEDRVSILKRLTGDIHEEVESHNHLLDRM

A0A6J1EPS6 bet1-like SNARE 1-2

2.2e-23

88.41

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Query:  QREHRSSRSALFDDIEEGGLRTS-SSVEIKEHDNDKALHTLEDRVSILKRLTGDIHEEVESHNHLLDRM
        +REHRSSRSALFDD+EEGGLR S S+VEIKEHDND+AL TLEDRVSILKRLTGDIHEEVESHN+LLDRM
Subjt:  QREHRSSRSALFDDIEEGGLRTS-SSVEIKEHDNDKALHTLEDRVSILKRLTGDIHEEVESHNHLLDRM

A0A6J1KMZ6 bet1-like SNARE 1-2

2.2e-23

88.41

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Query:  QREHRSSRSALFDDIEEGGLRTS-SSVEIKEHDNDKALHTLEDRVSILKRLTGDIHEEVESHNHLLDRM
        +REHRSSRSALFDD+EEGGLR S S+VEIKEHDND+AL TLEDRVSILKRLTGDIHEEVESHN+LLDRM
Subjt:  QREHRSSRSALFDDIEEGGLRTS-SSVEIKEHDNDKALHTLEDRVSILKRLTGDIHEEVESHNHLLDRM

SwissProt top hits

e value

%identity

Alignment

Q94CG2 Bet1-like SNARE 1-2

5.5e-16

61.97

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Query:  QREHRSSRSALF---DDIEEGGLRTSSSVEIKEHDNDKALHTLEDRVSILKRLTGDIHEEVESHNHLLDRM
        +RE+R+SR++LF   D +EEG LR SSS    E DND+AL  L+DRVS LKR+TGDIHEEVE+HN LLD++
Subjt:  QREHRSSRSALF---DDIEEGGLRTSSSVEIKEHDNDKALHTLEDRVSILKRLTGDIHEEVESHNHLLDRM

Q9M2J9 Bet1-like SNARE 1-1

1.9e-16

61.43

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Query:  QREHRSSRSALFDDIEEGGLRTSSSV--EIKEHDNDKALHTLEDRVSILKRLTGDIHEEVESHNHLLDRM
        +RE R  RS+LFD IEEGG+R +SS   EI EH+N++AL  L+DRV +LKRL+GDI+EEV++HN +LDRM
Subjt:  QREHRSSRSALFDDIEEGGLRTSSSV--EIKEHDNDKALHTLEDRVSILKRLTGDIHEEVESHNHLLDRM

Arabidopsis top hits

e value

%identity

Alignment

AT3G58170.1 BET1P/SFT1P-like protein 14A

1.3e-17

61.43

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Query:  QREHRSSRSALFDDIEEGGLRTSSSV--EIKEHDNDKALHTLEDRVSILKRLTGDIHEEVESHNHLLDRM
        +RE R  RS+LFD IEEGG+R +SS   EI EH+N++AL  L+DRV +LKRL+GDI+EEV++HN +LDRM
Subjt:  QREHRSSRSALFDDIEEGGLRTSSSV--EIKEHDNDKALHTLEDRVSILKRLTGDIHEEVESHNHLLDRM

AT4G14455.1 Target SNARE coiled-coil domain protein

3.9e-17

61.97

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Query:  QREHRSSRSALF---DDIEEGGLRTSSSVEIKEHDNDKALHTLEDRVSILKRLTGDIHEEVESHNHLLDRM
        +RE+R+SR++LF   D +EEG LR SSS    E DND+AL  L+DRVS LKR+TGDIHEEVE+HN LLD++
Subjt:  QREHRSSRSALF---DDIEEGGLRTSSSVEIKEHDNDKALHTLEDRVSILKRLTGDIHEEVESHNHLLDRM

Sequences

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CDS sequence

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GTTTTTGTTCAAAGGGAGCACCGTTCTTCTAGATCTGCTCTCTTTGATGACATCGAGGAGGGTGGTCTCAGGACTAGCTCTTCCGTTGAAATTAAAGAGCATGACAATGA
CAAAGCCCTCCATACTTTGGAAGATAGAGTTTCTATTCTGAAGAGGTTGACAGGTGACATTCACGAAGAAGTGGAGAGTCATAATCATTTACTTGACCGAATGGTATGTT
GGTTCTTCACGGTTATTTATTTATGTCTGACTGTCTTGCGAGTGGAAAATGATTGGAGCATGTTTCTTTATGTGGATTTTATTCTAATAAGGGAAATGGCATGGATGCTT
CAAGGGGTATAA

mRNA sequence

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Protein sequence

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VFVQREHRSSRSALFDDIEEGGLRTSSSVEIKEHDNDKALHTLEDRVSILKRLTGDIHEEVESHNHLLDRMVCWFFTVIYLCLTVLRVENDWSMFLYVDFILIREMAWML
QGV

HG10002280 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome