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HG10002289 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10002289
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionUnknown protein
Genome locationChr11:5204099..5204263
RNA-Seq ExpressionHG10002289
SyntenyHG10002289
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAA2616491.1 unnamed protein product [Spirodela intermedia]3.8e-1282Show/hide
Query:  AESPLILSAATSCARAAISAVVKVPSQIRDFFLGCRISDTHLPQLLLRTP
        A+ PLI+SAATSCARAAISAV KVPSQIRDFFLG RISDTH P L +RTP
Subjt:  AESPLILSAATSCARAAISAVVKVPSQIRDFFLGCRISDTHLPQLLLRTP

CAA7410804.1 unnamed protein product [Spirodela intermedia]2.1e-1078.43Show/hide
Query:  FAESPLILSAATSCARAAISAVVKVPSQIRDFFLGCRISDTHLPQLLLRTP
        +A SPLI+SAATS ARAAISAV KVPSQI DFFLG RISDTH PQ  +RTP
Subjt:  FAESPLILSAATSCARAAISAVVKVPSQIRDFFLGCRISDTHLPQLLLRTP

KAF5776266.1 hypothetical protein HanXRQr2_Chr12g0522381 [Helianthus annuus]1.2e-1072.22Show/hide
Query:  MAFAESPLILSAATSCARAAISAVVKVPSQIRDFFLGCRISDTHLPQLLLRTPL
        +  A+ PL+ SAATSCARAAIS + KVPSQIRDFFLG RISDTHLP   +RTPL
Subjt:  MAFAESPLILSAATSCARAAISAVVKVPSQIRDFFLGCRISDTHLPQLLLRTPL

PPD82210.1 hypothetical protein GOBAR_DD20833 [Gossypium barbadense]1.1e-1177.36Show/hide
Query:  MAFAESPLILSAATSCARAAISAVVKVPSQIRDFFLGCRISDTHLPQLLLRTP
        +  AE PLIL AATSCARAAIS V KVPSQ+RDF  G RISDTHLPQLL+RTP
Subjt:  MAFAESPLILSAATSCARAAISAVVKVPSQIRDFFLGCRISDTHLPQLLLRTP

VVV77779.1 unnamed protein product, partial [Nymphaea colorata]2.7e-1078Show/hide
Query:  AESPLILSAATSCARAAISAVVKVPSQIRDFFLGCRISDTHLPQLLLRTP
        A+ PLI+SAATSCARAAIS V  VPSQI DF  G RISDTHLPQLL+RTP
Subjt:  AESPLILSAATSCARAAISAVVKVPSQIRDFFLGCRISDTHLPQLLLRTP

TrEMBL top hitse value%identityAlignment
A0A0A0L8D6 Uncharacterized protein1.6e-1694.23Show/hide
Query:  MAFAESPLILSAATSCARAAISAVVKVPSQIRDFFLGCRISDTHLPQLLLRT
        MA AESPLILSAATSCARAAISAVVKVPSQIRDFFLGCRISDTHLPQLLL +
Subjt:  MAFAESPLILSAATSCARAAISAVVKVPSQIRDFFLGCRISDTHLPQLLLRT

A0A1J3K9H9 Uncharacterized protein (Fragment)4.5e-1175.47Show/hide
Query:  MAFAESPLILSAATSCARAAISAVVKVPSQIRDFFLGCRISDTHLPQLLLRTP
        +  AE PL+L AATSCAR AISAV KVPSQI DFF G RISDTH PQLL+RTP
Subjt:  MAFAESPLILSAATSCARAAISAVVKVPSQIRDFFLGCRISDTHLPQLLLRTP

A0A251SY65 Uncharacterized protein5.9e-1172.22Show/hide
Query:  MAFAESPLILSAATSCARAAISAVVKVPSQIRDFFLGCRISDTHLPQLLLRTPL
        +  A+ PL+ SAATSCARAAIS + KVPSQIRDFFLG RISDTHLP   +RTPL
Subjt:  MAFAESPLILSAATSCARAAISAVVKVPSQIRDFFLGCRISDTHLPQLLLRTPL

A0A7C9DWE3 Uncharacterized protein3.5e-1171.7Show/hide
Query:  MAFAESPLILSAATSCARAAISAVVKVPSQIRDFFLGCRISDTHLPQLLLRTP
        +  AESPL+L+AATSCARAAIS + KVPSQ+RDFF G RISDTH P  L+RTP
Subjt:  MAFAESPLILSAATSCARAAISAVVKVPSQIRDFFLGCRISDTHLPQLLLRTP

A0A7I8K3J4 Hypothetical protein1.8e-1282Show/hide
Query:  AESPLILSAATSCARAAISAVVKVPSQIRDFFLGCRISDTHLPQLLLRTP
        A+ PLI+SAATSCARAAISAV KVPSQIRDFFLG RISDTH P L +RTP
Subjt:  AESPLILSAATSCARAAISAVVKVPSQIRDFFLGCRISDTHLPQLLLRTP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTTTGCCGAATCACCTTTGATACTGAGCGCCGCCACATCGTGTGCACGCGCCGCCATCTCCGCCGTCGTGAAAGTCCCAAGCCAAATCCGAGATTTCTTCCTCGG
CTGCCGGATCTCCGACACCCATTTGCCCCAACTCCTCCTCCGTACGCCTCTGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCTTTTGCCGAATCACCTTTGATACTGAGCGCCGCCACATCGTGTGCACGCGCCGCCATCTCCGCCGTCGTGAAAGTCCCAAGCCAAATCCGAGATTTCTTCCTCGG
CTGCCGGATCTCCGACACCCATTTGCCCCAACTCCTCCTCCGTACGCCTCTGTAA
Protein sequenceShow/hide protein sequence
MAFAESPLILSAATSCARAAISAVVKVPSQIRDFFLGCRISDTHLPQLLLRTPL