CuGenDBv2

Gene ID	HG10002303
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	RECA_2 domain-containing protein
Genome location	Chr11:5378432..5385071
RNA-Seq Expression	HG10002303
Synteny	HG10002303
Gene Ontology terms	GO:0000725 - recombinational repair (biological process) GO:0003684 - damaged DNA binding (molecular function) GO:0005524 - ATP binding (molecular function) GO:0008094 - DNA-dependent ATPase activity (molecular function)
InterPro domains	IPR003593 - AAA+ ATPase domain IPR020568 - Ribosomal protein S5 domain 2-type fold IPR027417 - P-loop containing nucleoside triphosphate hydrolase

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG7018307.1 radA, partial [Cucurbita argyrosperma subsp. argyrosperma]

3.1e-263

85.01

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Query:  MQLLDMKSLRTIFNSRKHFLISTTSSSYTPSSISCRSRLNPNSSLFHYAGRFNTAQLSTIGVDAPNGDPVAISGTENGKAPDVWTVYDPVTSKLLTQRVR
        MQLLDMKSLRTIF SRKHFLIST         IS RSRLNPNSSLFH AGRF+  QLST GV APNGD +A SG  NGK+ DVWT+YDPVTSKLLTQRV+
Subjt:  MQLLDMKSLRTIFNSRKHFLISTTSSSYTPSSISCRSRLNPNSSLFHYAGRFNTAQLSTIGVDAPNGDPVAISGTENGKAPDVWTVYDPVTSKLLTQRVR

Query:  SSSDRKEPEPIIGTQTFGASSRNGDGAEDIFKEKTSESVRKVGLGGGSICRQNLGKVVGLKKKKSKVSWVCSNCGHNEGQWWGTCRSCDMVGTMKQFSEG
        SSSD        G +TFGASSRNGDGAE+   EKTSESVRKVGL GGS+ R NLGK+VG KKKKSKVSWVCS+CGH+EGQWWGTCRSCDMVGTMKQFSEG
Subjt:  SSSDRKEPEPIIGTQTFGASSRNGDGAEDIFKEKTSESVRKVGLGGGSICRQNLGKVVGLKKKKSKVSWVCSNCGHNEGQWWGTCRSCDMVGTMKQFSEG

Query:  NDSGGGSRGFEVSENVVRAWLPKQVTDEHPLRLTDVNRGINTLDWRLPLPGPFGNEVARVLGGGLVPGSLVLVGGDPGVGKSTLLLQ-------------
        +D+GGGSRGFEVSE +VRAWLPKQ TD HPLRLTDVNRGINTLDWRLPLPGPFGNEVARVLGGGLVPGSLVLVGGDPGVGKSTLLLQ             
Subjt:  NDSGGGSRGFEVSENVVRAWLPKQVTDEHPLRLTDVNRGINTLDWRLPLPGPFGNEVARVLGGGLVPGSLVLVGGDPGVGKSTLLLQ-------------

Query:  -----------SVEQIGNRADRLNIETENLFLYSSTDVEDIFEKIQLLSPRALIIDSIQTVYLQGVAGSAGGIGQVKECTSALLRFAKRTGIPILLIGHV
                   SVEQIGNRADRLNIETENLFLYSSTDVEDIFEKIQ LSPRALIIDSIQTVYLQGVAGSAGGIGQVKECTSALLRFAKRTGIPI LIGHV
Subjt:  -----------SVEQIGNRADRLNIETENLFLYSSTDVEDIFEKIQLLSPRALIIDSIQTVYLQGVAGSAGGIGQVKECTSALLRFAKRTGIPILLIGHV

Query:  NKSGEVAGPRVLEHIVDVVLYMEGEKCSSHRLLRPVKNRFGSTDELGVFEMLPSGLEVVSNPSEMFRRDHNANSNSEYLAGLAVAVIMDGTRTFLLEIQA
        NKSGEVAGPRVLEHIVDVVLYMEGEKCSSHRLLRPVKNRFGSTDELGVFEMLPSGLEVVSNPSEMFRRDHNAN +SEYLAGLAVAVIMDGTRTFLLEIQA
Subjt:  NKSGEVAGPRVLEHIVDVVLYMEGEKCSSHRLLRPVKNRFGSTDELGVFEMLPSGLEVVSNPSEMFRRDHNANSNSEYLAGLAVAVIMDGTRTFLLEIQA

Query:  LCLSRSSVARHVNGIQQSKADMIIAVLMKQAGLKLQDSVIFLNVVSGVTLTETAGDLAIAVAICSRH
        LCLSRSSV+RHVNGIQQSKADMII+VLMKQAGLKLQDSVIFLNVVSGVTLTETAGDLAIA+AICSRH
Subjt:  LCLSRSSVARHVNGIQQSKADMIIAVLMKQAGLKLQDSVIFLNVVSGVTLTETAGDLAIAVAICSRH

XP_022956185.1 uncharacterized protein LOC111457955 [Cucurbita moschata]

8.2e-264

84.29

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Query:  MQLLDMKSLRTIFNSRKHFLISTTSSSYTPSSISCRSRLNPNSSLFHYAGRFNTAQLSTIGVDAPNGDPVAISGTENGKAPDVWTVYDPVTSKLLTQRVR
        MQ  DMKSLRTIF SRKHFLIST         IS RSRLNPNSSLFH AGRF+ A+LSTIGV APNGD +A SG  NGK  DVWT+YDPVTSKLLTQRV+
Subjt:  MQLLDMKSLRTIFNSRKHFLISTTSSSYTPSSISCRSRLNPNSSLFHYAGRFNTAQLSTIGVDAPNGDPVAISGTENGKAPDVWTVYDPVTSKLLTQRVR

Query:  SSSDRKEPEPIIGTQTFGASSRNGDGAEDIFKEKTSE--------SVRKVGLGGGSICRQNLGKVVGLKKKKSKVSWVCSNCGHNEGQWWGTCRSCDMVG
        SSSD KEPEP  G +TFGASSRNGDGAE+   EKTSE        SVRKVGL GGS+ R NLGK+VG KKKKSKVSWVCS+CGH+EGQWWGTCRSCDMVG
Subjt:  SSSDRKEPEPIIGTQTFGASSRNGDGAEDIFKEKTSE--------SVRKVGLGGGSICRQNLGKVVGLKKKKSKVSWVCSNCGHNEGQWWGTCRSCDMVG

Query:  TMKQFSEGNDSGGGSRGFEVSENVVRAWLPKQVTDEHPLRLTDVNRGINTLDWRLPLPGPFGNEVARVLGGGLVPGSLVLVGGDPGVGKSTLLLQ-----
        TMKQFSEG+D+GGGSRGFEVSE +VRAWLPKQ TD HPLRLTDVNRGINTLDWRLPLPGPFGNEVARVLGGGLVPGSLVLVGGDPGVGKSTLLLQ     
Subjt:  TMKQFSEGNDSGGGSRGFEVSENVVRAWLPKQVTDEHPLRLTDVNRGINTLDWRLPLPGPFGNEVARVLGGGLVPGSLVLVGGDPGVGKSTLLLQ-----

Query:  -------------------SVEQIGNRADRLNIETENLFLYSSTDVEDIFEKIQLLSPRALIIDSIQTVYLQGVAGSAGGIGQVKECTSALLRFAKRTGI
                           SVEQIGNRADRLNIETENLFLYSSTDVEDIFEKIQ LSPRALI+DSIQTVYLQGVAGSAGGIGQVKECTSALLRFAKRTGI
Subjt:  -------------------SVEQIGNRADRLNIETENLFLYSSTDVEDIFEKIQLLSPRALIIDSIQTVYLQGVAGSAGGIGQVKECTSALLRFAKRTGI

Query:  PILLIGHVNKSGEVAGPRVLEHIVDVVLYMEGEKCSSHRLLRPVKNRFGSTDELGVFEMLPSGLEVVSNPSEMFRRDHNANSNSEYLAGLAVAVIMDGTR
        PI LIGHVNKSGEVAGPRVLEHIVDVVLYMEGEKCSSHRLLRPVKNRFGSTDELGVFEMLPSGLEVVSNPSEMFRRDHNAN +SEYLAGLAVAVIMDGTR
Subjt:  PILLIGHVNKSGEVAGPRVLEHIVDVVLYMEGEKCSSHRLLRPVKNRFGSTDELGVFEMLPSGLEVVSNPSEMFRRDHNANSNSEYLAGLAVAVIMDGTR

Query:  TFLLEIQALCLSRSSVARHVNGIQQSKADMIIAVLMKQAGLKLQDSVIFLNVVSGVTLTETAGDLAIAVAICS
        TFLLEIQALCLSRSSV+RHVNGIQQSKADMII+VLMKQAGLKLQDSVIFLNVVSGVTLTETAGDLAIA+AICS
Subjt:  TFLLEIQALCLSRSSVARHVNGIQQSKADMIIAVLMKQAGLKLQDSVIFLNVVSGVTLTETAGDLAIAVAICS

XP_022980476.1 uncharacterized protein LOC111479856 [Cucurbita maxima]

2.2e-269

86.37

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Query:  MQLLDMKSLRTIFNSRKHFLISTTSSSYTPSSISCRSRLNPNSSLFHYAGRFNTAQLSTIGVDAPNGDPVAISGTENGKAPDVWTVYDPVTSKLLTQRVR
        MQL DMKSLRTIF SRKHFLIST SSS TPS IS RSRLNP+SSLFH AGRFN AQLST  V APNG+ +A SG  NGK   VWT+YDPVTSKLLTQRV+
Subjt:  MQLLDMKSLRTIFNSRKHFLISTTSSSYTPSSISCRSRLNPNSSLFHYAGRFNTAQLSTIGVDAPNGDPVAISGTENGKAPDVWTVYDPVTSKLLTQRVR

Query:  SSSDRKEPEPIIGTQTFGASSRNGDGAEDIFKEKTSESVRKVGLGGGSICRQNLGKVVGLKKKKSKVSWVCSNCGHNEGQWWGTCRSCDMVGTMKQFSEG
        SSSDRK+PEP  G +TFGASSRNGDG E+   EKTSESVRKVGL GGS+ R  LGK+VG KKKKSKVSWVCS+CGH+EGQWWGTCRSCDMVGTMKQF+EG
Subjt:  SSSDRKEPEPIIGTQTFGASSRNGDGAEDIFKEKTSESVRKVGLGGGSICRQNLGKVVGLKKKKSKVSWVCSNCGHNEGQWWGTCRSCDMVGTMKQFSEG

Query:  NDSGGGSRGFEVSENVVRAWLPKQVTDEHPLRLTDVNRGINTLDWRLPLPGPFGNEVARVLGGGLVPGSLVLVGGDPGVGKSTLLLQ-------------
        +D+GGGSRGFEVSENVVRAWLPKQ TD HPLRLTDVNRGINTLDWRLPLPGPFGNEVARVLGGGLVPGSLVLVGGDPGVGKSTLLLQ             
Subjt:  NDSGGGSRGFEVSENVVRAWLPKQVTDEHPLRLTDVNRGINTLDWRLPLPGPFGNEVARVLGGGLVPGSLVLVGGDPGVGKSTLLLQ-------------

Query:  -----------SVEQIGNRADRLNIETENLFLYSSTDVEDIFEKIQLLSPRALIIDSIQTVYLQGVAGSAGGIGQVKECTSALLRFAKRTGIPILLIGHV
                   SV+QIGNRADRLNIETENLFLYSSTDVEDIFEKIQ LSPRALIIDSIQTVYLQGVAGSAGGIGQVKECTSALLRFAKRTGIPILLIGHV
Subjt:  -----------SVEQIGNRADRLNIETENLFLYSSTDVEDIFEKIQLLSPRALIIDSIQTVYLQGVAGSAGGIGQVKECTSALLRFAKRTGIPILLIGHV

Query:  NKSGEVAGPRVLEHIVDVVLYMEGEKCSSHRLLRPVKNRFGSTDELGVFEMLPSGLEVVSNPSEMFRRDHNANSNSEYLAGLAVAVIMDGTRTFLLEIQA
        NKSGEVAGPRVLEHIVDVVLYMEGEKCSSHRLLRPVKNRFGSTDELGVFEMLPSGLEVVSNPSEMFRRD+NANSNSEYLAGLAVAVIMDGTRTFLLEIQA
Subjt:  NKSGEVAGPRVLEHIVDVVLYMEGEKCSSHRLLRPVKNRFGSTDELGVFEMLPSGLEVVSNPSEMFRRDHNANSNSEYLAGLAVAVIMDGTRTFLLEIQA

Query:  LCLSRSSVARHVNGIQQSKADMIIAVLMKQAGLKLQDSVIFLNVVSGVTLTETAGDLAIAVAICS
        LCLSRSSV+RHVNGIQQSKADMII+VLMKQAGLKLQDSVIFLNVVSGVTLTETAGDLAIA+AICS
Subjt:  LCLSRSSVARHVNGIQQSKADMIIAVLMKQAGLKLQDSVIFLNVVSGVTLTETAGDLAIAVAICS

XP_023527681.1 uncharacterized protein LOC111790828 [Cucurbita pepo subsp. pepo]

1.9e-268

86.37

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Query:  MQLLDMKSLRTIFNSRKHFLISTTSSSYTPSSISCRSRLNPNSSLFHYAGRFNTAQLSTIGVDAPNGDPVAISGTENGKAPDVWTVYDPVTSKLLTQRVR
        MQL DMKSLRTIF SRKHFLI         S+IS RSRLNPNSSLFH AGRF+ AQLSTIGV APNGD +A SG  NGK  DVWT+YDPVTSKLLTQRV+
Subjt:  MQLLDMKSLRTIFNSRKHFLISTTSSSYTPSSISCRSRLNPNSSLFHYAGRFNTAQLSTIGVDAPNGDPVAISGTENGKAPDVWTVYDPVTSKLLTQRVR

Query:  SSSDRKEPEPIIGTQTFGASSRNGDGAEDIFKEKTSESVRKVGLGGGSICRQNLGKVVGLKKKKSKVSWVCSNCGHNEGQWWGTCRSCDMVGTMKQFSEG
        SSSDRKEPEP  G +TFGASSRNGDGAE+   EKTS SVRKVGL GGS+ R NLGK+VG KKKKSKVSWVC++CGH+EGQWWGTCRSCDMVGTMKQFSEG
Subjt:  SSSDRKEPEPIIGTQTFGASSRNGDGAEDIFKEKTSESVRKVGLGGGSICRQNLGKVVGLKKKKSKVSWVCSNCGHNEGQWWGTCRSCDMVGTMKQFSEG

Query:  NDSGGGSRGFEVSENVVRAWLPKQVTDEHPLRLTDVNRGINTLDWRLPLPGPFGNEVARVLGGGLVPGSLVLVGGDPGVGKSTLLLQ-------------
        +D+GGGSRGFEVSENVVRAWLPKQ TD HPLRLTDVNRGINTLDWRLPLPGPFGNEVARVLGGGLVPGSLVLVGGDPGVGKSTLLLQ             
Subjt:  NDSGGGSRGFEVSENVVRAWLPKQVTDEHPLRLTDVNRGINTLDWRLPLPGPFGNEVARVLGGGLVPGSLVLVGGDPGVGKSTLLLQ-------------

Query:  -----------SVEQIGNRADRLNIETENLFLYSSTDVEDIFEKIQLLSPRALIIDSIQTVYLQGVAGSAGGIGQVKECTSALLRFAKRTGIPILLIGHV
                   SVEQIGNRADRLNIETENLFLYSSTDVEDIFEKIQ LSPRALIIDSIQTVYLQGVAGSAGGIGQVKECTSALLRFAKRT IPILLIGHV
Subjt:  -----------SVEQIGNRADRLNIETENLFLYSSTDVEDIFEKIQLLSPRALIIDSIQTVYLQGVAGSAGGIGQVKECTSALLRFAKRTGIPILLIGHV

Query:  NKSGEVAGPRVLEHIVDVVLYMEGEKCSSHRLLRPVKNRFGSTDELGVFEMLPSGLEVVSNPSEMFRRDHNANSNSEYLAGLAVAVIMDGTRTFLLEIQA
        NKSGEVAGPRVLEHIVDVVLYMEGEKCSSHRLLRPVKNRFGSTDELGVFEMLPSGLEVVSNPSEMFRRDHNANSNSEYLAGLAVAVIMDGTRTFLLEIQA
Subjt:  NKSGEVAGPRVLEHIVDVVLYMEGEKCSSHRLLRPVKNRFGSTDELGVFEMLPSGLEVVSNPSEMFRRDHNANSNSEYLAGLAVAVIMDGTRTFLLEIQA

Query:  LCLSRSSVARHVNGIQQSKADMIIAVLMKQAGLKLQDSVIFLNVVSGVTLTETAGDLAIAVAICS
        LCLSRSSV+RHVNGIQQSKADMII+VLMKQAGLKLQDSVIFLNVVSGVTLTETAGDLAIA+AICS
Subjt:  LCLSRSSVARHVNGIQQSKADMIIAVLMKQAGLKLQDSVIFLNVVSGVTLTETAGDLAIAVAICS

XP_038906306.1 DNA repair protein RadA [Benincasa hispida]

5.1e-274

87.26

Show/hide

Query:  MQLLDMKSLRTIFNSRKHFLISTTSSSYTPSSISCRSRLNPNSSLFHYAGRFNTAQLSTIGVDAPNGDPVAISGTENGKAPDVWTVYDPVTSKLLTQRVR
        MQLLDMKS RTIF SRKHFLIS TSSSYT S IS RSRLNPNSSLFHYAGRFNTAQLSTIGVDAPNGDP+  SG+ENGK   VWT YDPVTS+LLTQRVR
Subjt:  MQLLDMKSLRTIFNSRKHFLISTTSSSYTPSSISCRSRLNPNSSLFHYAGRFNTAQLSTIGVDAPNGDPVAISGTENGKAPDVWTVYDPVTSKLLTQRVR

Query:  SSSDRKEPEPIIGTQTFGASSRNGDGAEDIFKEKTSESVRKVGLGGGSICRQNLGKVVGLKKKKSKVSWVCSNCGHNEGQWWGTCRSCDMVGTMKQFSEG
        S SDRKEPEP IG QTFGASSRNGDGA+D   EKTSESV KVGLG GS+CR NLGKVVG KKKKSKVSWVCSNCGHNEGQWWGTCRSCDMVGTMKQFSEG
Subjt:  SSSDRKEPEPIIGTQTFGASSRNGDGAEDIFKEKTSESVRKVGLGGGSICRQNLGKVVGLKKKKSKVSWVCSNCGHNEGQWWGTCRSCDMVGTMKQFSEG

Query:  NDSGGGSRGFEVSENVVRAWLPKQVTDEHPLRLTDVNRGINTLDWRLPLPGPFGNEVARVLGGGLVPGSLVLVGGDPGVGKSTLLLQ-------------
        +DSGGGSRGFEVSENVVRAWLPKQ TD +PLRLTDVNRGINT DWRLPLPGPFG+EVARVLGGGLVPGSLVL+GGDPGVGKSTLLLQ             
Subjt:  NDSGGGSRGFEVSENVVRAWLPKQVTDEHPLRLTDVNRGINTLDWRLPLPGPFGNEVARVLGGGLVPGSLVLVGGDPGVGKSTLLLQ-------------

Query:  -----------SVEQIGNRADRLNIETENLFLYSSTDVEDIFEKIQLLSPRALIIDSIQTVYLQGVAGSAGGIGQVKECTSALLRFAKRTGIPILLIGHV
                   SVEQIGNRADRLNIETENL+LYSSTDVEDIFEKIQ +SPRALIIDSIQTVYLQGVAGSAGGIGQVKECTSALLRFAKRTGIPILLIGHV
Subjt:  -----------SVEQIGNRADRLNIETENLFLYSSTDVEDIFEKIQLLSPRALIIDSIQTVYLQGVAGSAGGIGQVKECTSALLRFAKRTGIPILLIGHV

Query:  NKSGEVAGPRVLEHIVDVVLYMEGEKCSSHRLLRPVKNRFGSTDELGVFEMLPSGLEVVSNPSEMFRRDHNANSNSEYLAGLAVAVIMDGTRTFLLEIQA
        NKSGEVAGPRVLEHIVDVVLYMEG+KC SHRLLRPVKNRFGSTDELGVFEMLPSGLEVVSNPSEMFRRDHNANSNSEYLAGLAVAVIMDGTRTFLLEIQA
Subjt:  NKSGEVAGPRVLEHIVDVVLYMEGEKCSSHRLLRPVKNRFGSTDELGVFEMLPSGLEVVSNPSEMFRRDHNANSNSEYLAGLAVAVIMDGTRTFLLEIQA

Query:  LCLSRSSVARHVNGIQQSKADMIIAVLMKQAGLKLQDSVIFLNVVSGVTLTETAGDLAIAVAICS
        LCLSRSSV R VNGI QSKAD+II+VLMKQAGLKLQ+S IFLNVVSG+TLTETAGDLAIA+AICS
Subjt:  LCLSRSSVARHVNGIQQSKADMIIAVLMKQAGLKLQDSVIFLNVVSGVTLTETAGDLAIAVAICS

TrEMBL top hits

e value

%identity

Alignment

A0A1S3BHR0 DNA repair protein RadA isoform X1

1.9e-226

75.75

Show/hide

Query:  MQLLDMKSLRTIFNSRKHFLISTTSSSYTPSSISCRSRLNPNSSLFHYAGRFNTAQLSTIGVDAPNGDPVAISGTENGKAPDVWTVYDPVTSKLLTQRVR
        MQLLDMKSLRTIF SRKHFLIS++ SSY  S ISCRS L+PNSSLFHYA RFNTA LST   DA NGDP+A SG EN K  +VW++Y  V+SKL TQRV 
Subjt:  MQLLDMKSLRTIFNSRKHFLISTTSSSYTPSSISCRSRLNPNSSLFHYAGRFNTAQLSTIGVDAPNGDPVAISGTENGKAPDVWTVYDPVTSKLLTQRVR

Query:  SSSDRKEPEPIIGTQTFGASSRNGDGAEDIFKEKTSESVRKVGLGGGSICRQNLGKVVGLKKKKSKVSWVCSNCGHNEGQWWGTCRSCDMVGTMKQFSEG
        SSSD KEPE  +G         NGDGAED   EKTSESVRKVGL     C+ N GK+ GL KKKSKVSWVCS+CGH+EGQWWGTC+SC  VGTMKQFS G
Subjt:  SSSDRKEPEPIIGTQTFGASSRNGDGAEDIFKEKTSESVRKVGLGGGSICRQNLGKVVGLKKKKSKVSWVCSNCGHNEGQWWGTCRSCDMVGTMKQFSEG

Query:  NDSGGGSRGFEVSENVVRAWLPKQVTDEHPLRLTDVNRGINTLDWRLPLPGPFGNEVARVLGGGLVPGSLVLVGGDPGVGKSTLLLQ-------------
        NDS GGS          R WLPKQVT+ +P+RLTDVNRGIN  DWRLPLPGPFGNEVARVLGGGLVPGSLVL+GGDPGVGKSTLLLQ             
Subjt:  NDSGGGSRGFEVSENVVRAWLPKQVTDEHPLRLTDVNRGINTLDWRLPLPGPFGNEVARVLGGGLVPGSLVLVGGDPGVGKSTLLLQ-------------

Query:  -----------SVEQIGNRADRLNIETENLFLYSSTDVEDIFEKIQLLSPRALIIDSIQTVYLQGVAGSAGGIGQVKECTSALLRFAKRTGIPILLIGHV
                   SVEQIGNRADRL I+TENLFLYSSTDVEDIFEKIQ LSPRALIIDSIQTVYLQ VAGSAGGI QVKECTSA LR+AK TGIPI LIGHV
Subjt:  -----------SVEQIGNRADRLNIETENLFLYSSTDVEDIFEKIQLLSPRALIIDSIQTVYLQGVAGSAGGIGQVKECTSALLRFAKRTGIPILLIGHV

Query:  NKSGEVAGPRVLEHIVDVVLYMEGEKCSSHRLLRPVKNRFGSTDELGVFEMLPSGLEVVSNPSEMFRRDHNANSNSEYLAGLAVAVIMDGTRTFLLEIQA
        NKSGEVAGPR+LEHIVDVVLY+EGEKCS HRLLRPVKNRFGSTDELGVFEMLPSGLEVVSNPSEMFRRDHN N NSE+L GLAVAV+MDGT+TFLLEIQA
Subjt:  NKSGEVAGPRVLEHIVDVVLYMEGEKCSSHRLLRPVKNRFGSTDELGVFEMLPSGLEVVSNPSEMFRRDHNANSNSEYLAGLAVAVIMDGTRTFLLEIQA

Query:  LCLSRSSVARHVNGIQQSKADMIIAVLMKQAGLKLQDSVIFLNVVSGVTLTETAGDLAIAVAICS
        LC S SS   HVNGIQ  +ADMII+VLMKQAGLKLQ + IF+NVVSGVTLTETAGDLAIA+AICS
Subjt:  LCLSRSSVARHVNGIQQSKADMIIAVLMKQAGLKLQDSVIFLNVVSGVTLTETAGDLAIAVAICS

A0A5D3C9C8 DNA repair protein RadA isoform X1

1.9e-226

75.75

Show/hide

Query:  MQLLDMKSLRTIFNSRKHFLISTTSSSYTPSSISCRSRLNPNSSLFHYAGRFNTAQLSTIGVDAPNGDPVAISGTENGKAPDVWTVYDPVTSKLLTQRVR
        MQLLDMKSLRTIF SRKHFLIS++ SSY  S ISCRS L+PNSSLFHYA RFNTA LST   DA NGDP+A SG EN K  +VW++Y  V+SKL TQRV 
Subjt:  MQLLDMKSLRTIFNSRKHFLISTTSSSYTPSSISCRSRLNPNSSLFHYAGRFNTAQLSTIGVDAPNGDPVAISGTENGKAPDVWTVYDPVTSKLLTQRVR

Query:  SSSDRKEPEPIIGTQTFGASSRNGDGAEDIFKEKTSESVRKVGLGGGSICRQNLGKVVGLKKKKSKVSWVCSNCGHNEGQWWGTCRSCDMVGTMKQFSEG
        SSSD KEPE  +G         NGDGAED   EKTSESVRKVGL     C+ N GK+ GL KKKSKVSWVCS+CGH+EGQWWGTC+SC  VGTMKQFS G
Subjt:  SSSDRKEPEPIIGTQTFGASSRNGDGAEDIFKEKTSESVRKVGLGGGSICRQNLGKVVGLKKKKSKVSWVCSNCGHNEGQWWGTCRSCDMVGTMKQFSEG

Query:  NDSGGGSRGFEVSENVVRAWLPKQVTDEHPLRLTDVNRGINTLDWRLPLPGPFGNEVARVLGGGLVPGSLVLVGGDPGVGKSTLLLQ-------------
        NDS GGS          R WLPKQVT+ +P+RLTDVNRGIN  DWRLPLPGPFGNEVARVLGGGLVPGSLVL+GGDPGVGKSTLLLQ             
Subjt:  NDSGGGSRGFEVSENVVRAWLPKQVTDEHPLRLTDVNRGINTLDWRLPLPGPFGNEVARVLGGGLVPGSLVLVGGDPGVGKSTLLLQ-------------

Query:  -----------SVEQIGNRADRLNIETENLFLYSSTDVEDIFEKIQLLSPRALIIDSIQTVYLQGVAGSAGGIGQVKECTSALLRFAKRTGIPILLIGHV
                   SVEQIGNRADRL I+TENLFLYSSTDVEDIFEKIQ LSPRALIIDSIQTVYLQ VAGSAGGI QVKECTSA LR+AK TGIPI LIGHV
Subjt:  -----------SVEQIGNRADRLNIETENLFLYSSTDVEDIFEKIQLLSPRALIIDSIQTVYLQGVAGSAGGIGQVKECTSALLRFAKRTGIPILLIGHV

Query:  NKSGEVAGPRVLEHIVDVVLYMEGEKCSSHRLLRPVKNRFGSTDELGVFEMLPSGLEVVSNPSEMFRRDHNANSNSEYLAGLAVAVIMDGTRTFLLEIQA
        NKSGEVAGPR+LEHIVDVVLY+EGEKCS HRLLRPVKNRFGSTDELGVFEMLPSGLEVVSNPSEMFRRDHN N NSE+L GLAVAV+MDGT+TFLLEIQA
Subjt:  NKSGEVAGPRVLEHIVDVVLYMEGEKCSSHRLLRPVKNRFGSTDELGVFEMLPSGLEVVSNPSEMFRRDHNANSNSEYLAGLAVAVIMDGTRTFLLEIQA

Query:  LCLSRSSVARHVNGIQQSKADMIIAVLMKQAGLKLQDSVIFLNVVSGVTLTETAGDLAIAVAICS
        LC S SS   HVNGIQ  +ADMII+VLMKQAGLKLQ + IF+NVVSGVTLTETAGDLAIA+AICS
Subjt:  LCLSRSSVARHVNGIQQSKADMIIAVLMKQAGLKLQDSVIFLNVVSGVTLTETAGDLAIAVAICS

A0A6J1DHZ5 uncharacterized protein LOC111021088

1.2e-257

83.54

Show/hide

Query:  MQLLDMKSLRTIFNSRKHFLISTTSSSYTPSSISCRSRLNPNSSLFHYAGRFNTAQLSTIGVDAPNGDPVAISGTENGKAPDVWTVYDPVTSKLLTQRVR
        MQL DMKSLRTIF SRKHFL            ISCRSRLN NSSLFHYAG FN AQLST  VDAPNGD       EN    +VWT+YDPVTS+L  QRV+
Subjt:  MQLLDMKSLRTIFNSRKHFLISTTSSSYTPSSISCRSRLNPNSSLFHYAGRFNTAQLSTIGVDAPNGDPVAISGTENGKAPDVWTVYDPVTSKLLTQRVR

Query:  SSSDRKEPEPIIGTQTFGASSRNGDGAEDIFKEKTSESVRKVGLGGGSICRQNLGKVVGLKKKKSKVSWVCSNCGHNEGQWWGTCRSCDMVGTMKQFSEG
        SSSDR EPEP IG +TFG S RN +G ED+  EK  ES RKVG G GSICR NLGKVVG+KKKKSKVSWVCSNCGHNEGQWWGTCRSCDMVGTMKQFSEG
Subjt:  SSSDRKEPEPIIGTQTFGASSRNGDGAEDIFKEKTSESVRKVGLGGGSICRQNLGKVVGLKKKKSKVSWVCSNCGHNEGQWWGTCRSCDMVGTMKQFSEG

Query:  NDSGGGSRGFEVSENVVRAWLPKQVTDEHPLRLTDVNRGINTLDWRLPLPGPFGNEVARVLGGGLVPGSLVLVGGDPGVGKSTLLLQ-------------
         DSGGGSRGFEVSENVVRAWLPKQ TD HP RLTDVNRGINTLDWRLPLPGPFG+EVARVLGGGLVPGSLVLVGGDPGVGKSTLLLQ             
Subjt:  NDSGGGSRGFEVSENVVRAWLPKQVTDEHPLRLTDVNRGINTLDWRLPLPGPFGNEVARVLGGGLVPGSLVLVGGDPGVGKSTLLLQ-------------

Query:  -----------SVEQIGNRADRLNIETENLFLYSSTDVEDIFEKIQLLSPRALIIDSIQTVYLQGVAGSAGGIGQVKECTSALLRFAKRTGIPILLIGHV
                   SVEQIGNRADRL IE ENLFLYSSTDVEDIFEKIQ LSPRALIIDSIQTVYLQGVAGSAGGIGQVKECTSALLRFAKRTGIPILLIGHV
Subjt:  -----------SVEQIGNRADRLNIETENLFLYSSTDVEDIFEKIQLLSPRALIIDSIQTVYLQGVAGSAGGIGQVKECTSALLRFAKRTGIPILLIGHV

Query:  NKSGEVAGPRVLEHIVDVVLYMEGEKCSSHRLLRPVKNRFGSTDELGVFEMLPSGLEVVSNPSEMFRRDHNANSNSEYLAGLAVAVIMDGTRTFLLEIQA
        NKSGEVAGPRVLEHIVDVVLYMEGEKCS+HRLLRPVKNRFGSTDELGVFEMLPSGLEVVSNPSEMFRRDHNA+SNSEYLAGLAVAVIMDGTRTFLLEIQA
Subjt:  NKSGEVAGPRVLEHIVDVVLYMEGEKCSSHRLLRPVKNRFGSTDELGVFEMLPSGLEVVSNPSEMFRRDHNANSNSEYLAGLAVAVIMDGTRTFLLEIQA

Query:  LCLSRSSVARHVNGIQQSKADMIIAVLMKQAGLKLQDSVIFLNVVSGVTLTETAGDLAIAVAICS
        LCLSRSSV RHVNGIQQSKADMII+VLMKQAGLKLQ+SVIFLNVVSGVTLTETAGDLAIA+AICS
Subjt:  LCLSRSSVARHVNGIQQSKADMIIAVLMKQAGLKLQDSVIFLNVVSGVTLTETAGDLAIAVAICS

A0A6J1GX44 uncharacterized protein LOC111457955

4.0e-264

84.29

Show/hide

Query:  MQLLDMKSLRTIFNSRKHFLISTTSSSYTPSSISCRSRLNPNSSLFHYAGRFNTAQLSTIGVDAPNGDPVAISGTENGKAPDVWTVYDPVTSKLLTQRVR
        MQ  DMKSLRTIF SRKHFLIST         IS RSRLNPNSSLFH AGRF+ A+LSTIGV APNGD +A SG  NGK  DVWT+YDPVTSKLLTQRV+
Subjt:  MQLLDMKSLRTIFNSRKHFLISTTSSSYTPSSISCRSRLNPNSSLFHYAGRFNTAQLSTIGVDAPNGDPVAISGTENGKAPDVWTVYDPVTSKLLTQRVR

Query:  SSSDRKEPEPIIGTQTFGASSRNGDGAEDIFKEKTSE--------SVRKVGLGGGSICRQNLGKVVGLKKKKSKVSWVCSNCGHNEGQWWGTCRSCDMVG
        SSSD KEPEP  G +TFGASSRNGDGAE+   EKTSE        SVRKVGL GGS+ R NLGK+VG KKKKSKVSWVCS+CGH+EGQWWGTCRSCDMVG
Subjt:  SSSDRKEPEPIIGTQTFGASSRNGDGAEDIFKEKTSE--------SVRKVGLGGGSICRQNLGKVVGLKKKKSKVSWVCSNCGHNEGQWWGTCRSCDMVG

Query:  TMKQFSEGNDSGGGSRGFEVSENVVRAWLPKQVTDEHPLRLTDVNRGINTLDWRLPLPGPFGNEVARVLGGGLVPGSLVLVGGDPGVGKSTLLLQ-----
        TMKQFSEG+D+GGGSRGFEVSE +VRAWLPKQ TD HPLRLTDVNRGINTLDWRLPLPGPFGNEVARVLGGGLVPGSLVLVGGDPGVGKSTLLLQ     
Subjt:  TMKQFSEGNDSGGGSRGFEVSENVVRAWLPKQVTDEHPLRLTDVNRGINTLDWRLPLPGPFGNEVARVLGGGLVPGSLVLVGGDPGVGKSTLLLQ-----

Query:  -------------------SVEQIGNRADRLNIETENLFLYSSTDVEDIFEKIQLLSPRALIIDSIQTVYLQGVAGSAGGIGQVKECTSALLRFAKRTGI
                           SVEQIGNRADRLNIETENLFLYSSTDVEDIFEKIQ LSPRALI+DSIQTVYLQGVAGSAGGIGQVKECTSALLRFAKRTGI
Subjt:  -------------------SVEQIGNRADRLNIETENLFLYSSTDVEDIFEKIQLLSPRALIIDSIQTVYLQGVAGSAGGIGQVKECTSALLRFAKRTGI

Query:  PILLIGHVNKSGEVAGPRVLEHIVDVVLYMEGEKCSSHRLLRPVKNRFGSTDELGVFEMLPSGLEVVSNPSEMFRRDHNANSNSEYLAGLAVAVIMDGTR
        PI LIGHVNKSGEVAGPRVLEHIVDVVLYMEGEKCSSHRLLRPVKNRFGSTDELGVFEMLPSGLEVVSNPSEMFRRDHNAN +SEYLAGLAVAVIMDGTR
Subjt:  PILLIGHVNKSGEVAGPRVLEHIVDVVLYMEGEKCSSHRLLRPVKNRFGSTDELGVFEMLPSGLEVVSNPSEMFRRDHNANSNSEYLAGLAVAVIMDGTR

Query:  TFLLEIQALCLSRSSVARHVNGIQQSKADMIIAVLMKQAGLKLQDSVIFLNVVSGVTLTETAGDLAIAVAICS
        TFLLEIQALCLSRSSV+RHVNGIQQSKADMII+VLMKQAGLKLQDSVIFLNVVSGVTLTETAGDLAIA+AICS
Subjt:  TFLLEIQALCLSRSSVARHVNGIQQSKADMIIAVLMKQAGLKLQDSVIFLNVVSGVTLTETAGDLAIAVAICS

A0A6J1ITP4 uncharacterized protein LOC111479856

1.1e-269

86.37

Show/hide

Query:  MQLLDMKSLRTIFNSRKHFLISTTSSSYTPSSISCRSRLNPNSSLFHYAGRFNTAQLSTIGVDAPNGDPVAISGTENGKAPDVWTVYDPVTSKLLTQRVR
        MQL DMKSLRTIF SRKHFLIST SSS TPS IS RSRLNP+SSLFH AGRFN AQLST  V APNG+ +A SG  NGK   VWT+YDPVTSKLLTQRV+
Subjt:  MQLLDMKSLRTIFNSRKHFLISTTSSSYTPSSISCRSRLNPNSSLFHYAGRFNTAQLSTIGVDAPNGDPVAISGTENGKAPDVWTVYDPVTSKLLTQRVR

Query:  SSSDRKEPEPIIGTQTFGASSRNGDGAEDIFKEKTSESVRKVGLGGGSICRQNLGKVVGLKKKKSKVSWVCSNCGHNEGQWWGTCRSCDMVGTMKQFSEG
        SSSDRK+PEP  G +TFGASSRNGDG E+   EKTSESVRKVGL GGS+ R  LGK+VG KKKKSKVSWVCS+CGH+EGQWWGTCRSCDMVGTMKQF+EG
Subjt:  SSSDRKEPEPIIGTQTFGASSRNGDGAEDIFKEKTSESVRKVGLGGGSICRQNLGKVVGLKKKKSKVSWVCSNCGHNEGQWWGTCRSCDMVGTMKQFSEG

Query:  NDSGGGSRGFEVSENVVRAWLPKQVTDEHPLRLTDVNRGINTLDWRLPLPGPFGNEVARVLGGGLVPGSLVLVGGDPGVGKSTLLLQ-------------
        +D+GGGSRGFEVSENVVRAWLPKQ TD HPLRLTDVNRGINTLDWRLPLPGPFGNEVARVLGGGLVPGSLVLVGGDPGVGKSTLLLQ             
Subjt:  NDSGGGSRGFEVSENVVRAWLPKQVTDEHPLRLTDVNRGINTLDWRLPLPGPFGNEVARVLGGGLVPGSLVLVGGDPGVGKSTLLLQ-------------

Query:  -----------SVEQIGNRADRLNIETENLFLYSSTDVEDIFEKIQLLSPRALIIDSIQTVYLQGVAGSAGGIGQVKECTSALLRFAKRTGIPILLIGHV
                   SV+QIGNRADRLNIETENLFLYSSTDVEDIFEKIQ LSPRALIIDSIQTVYLQGVAGSAGGIGQVKECTSALLRFAKRTGIPILLIGHV
Subjt:  -----------SVEQIGNRADRLNIETENLFLYSSTDVEDIFEKIQLLSPRALIIDSIQTVYLQGVAGSAGGIGQVKECTSALLRFAKRTGIPILLIGHV

Query:  NKSGEVAGPRVLEHIVDVVLYMEGEKCSSHRLLRPVKNRFGSTDELGVFEMLPSGLEVVSNPSEMFRRDHNANSNSEYLAGLAVAVIMDGTRTFLLEIQA
        NKSGEVAGPRVLEHIVDVVLYMEGEKCSSHRLLRPVKNRFGSTDELGVFEMLPSGLEVVSNPSEMFRRD+NANSNSEYLAGLAVAVIMDGTRTFLLEIQA
Subjt:  NKSGEVAGPRVLEHIVDVVLYMEGEKCSSHRLLRPVKNRFGSTDELGVFEMLPSGLEVVSNPSEMFRRDHNANSNSEYLAGLAVAVIMDGTRTFLLEIQA

Query:  LCLSRSSVARHVNGIQQSKADMIIAVLMKQAGLKLQDSVIFLNVVSGVTLTETAGDLAIAVAICS
        LCLSRSSV+RHVNGIQQSKADMII+VLMKQAGLKLQDSVIFLNVVSGVTLTETAGDLAIA+AICS
Subjt:  LCLSRSSVARHVNGIQQSKADMIIAVLMKQAGLKLQDSVIFLNVVSGVTLTETAGDLAIAVAICS

SwissProt top hits

e value

%identity

Alignment

P37572 DNA repair protein RadA

2.8e-73

41.44

Show/hide

Query:  KSKVSWVCSNCGHNEGQWWGTCRSCDMVGTMKQFSEGNDSGGGSRGFEVSENVVRAWLPKQV----TDEHPLRLTDVNRGINTLDWRLPLPGPFGNEVAR
        K+K  ++C +CG+   +W G C  C    TM +  E       +R    S +V     P  +    T E P   T +                   E  R
Subjt:  KSKVSWVCSNCGHNEGQWWGTCRSCDMVGTMKQFSEGNDSGGGSRGFEVSENVVRAWLPKQV----TDEHPLRLTDVNRGINTLDWRLPLPGPFGNEVAR

Query:  VLGGGLVPGSLVLVGGDPGVGKSTLLLQ-------------------SVEQIGNRADRLNIETENLFLYSSTDVEDIFEKIQLLSPRALIIDSIQTVYLQ
        VLGGG+V GSLVL+GGDPG+GKSTLLLQ                   SV+Q   RADRL I   +L + S TD+E I   IQ ++P  +++DSIQTVY  
Subjt:  VLGGGLVPGSLVLVGGDPGVGKSTLLLQ-------------------SVEQIGNRADRLNIETENLFLYSSTDVEDIFEKIQLLSPRALIIDSIQTVYLQ

Query:  GVAGSAGGIGQVKECTSALLRFAKRTGIPILLIGHVNKSGEVAGPRVLEHIVDVVLYMEGEKCSSHRLLRPVKNRFGSTDELGVFEMLPSGLEVVSNPSE
         +  + G + QV+ECT+ L++ AK  GIPI ++GHV K G +AGPR+LEH+VD VLY EGE+  + R+LR VKNRFGST+E+G+FEM   GL  V NPSE
Subjt:  GVAGSAGGIGQVKECTSALLRFAKRTGIPILLIGHVNKSGEVAGPRVLEHIVDVVLYMEGEKCSSHRLLRPVKNRFGSTDELGVFEMLPSGLEVVSNPSE

Query:  MFRRDHNANSNSEYLAGLAVAVIMDGTRTFLLEIQALC--LSRSSVARHVNGIQQSKADMIIAVLMKQAGLKLQDSVIFLNVVSGVTLTETAGDLAIAVA
        +F  + +A S     AG ++   M+GTR  L+EIQAL    S  +  R   GI  ++  +++AVL K+ GL LQ+   +L V  GV L E A DLAI ++
Subjt:  MFRRDHNANSNSEYLAGLAVAVIMDGTRTFLLEIQALC--LSRSSVARHVNGIQQSKADMIIAVLMKQAGLKLQDSVIFLNVVSGVTLTETAGDLAIAVA

Query:  ICS
        I S
Subjt:  ICS

P74391 DNA repair protein RadA

2.5e-69

37.32

Show/hide

Query:  KSKVSWVCSNCGHNEGQWWGTCRSCDMVGTMKQFSEGNDSGG---GSRGFEVS-ENVVRAWLPKQVTDEHPLRLTDVNRGINTLDWRLPLPGPFGNEVAR
        K++  +VCS CG +  QW+G C  C   G++++      S G    S G + S  + V+   P+       +R  +  R ++              E+ R
Subjt:  KSKVSWVCSNCGHNEGQWWGTCRSCDMVGTMKQFSEGNDSGG---GSRGFEVS-ENVVRAWLPKQVTDEHPLRLTDVNRGINTLDWRLPLPGPFGNEVAR

Query:  VLGGGLVPGSLVLVGGDPGVGKSTLLLQ-------------------SVEQIGNRADRLNI-----------------ETENLFLYSSTDVEDIFEKIQL
        VLGGG+VPG+L+L+GGDPG+GKSTLLLQ                   S +QI  RA RL I                    NLF+   T+++DI  +++ 
Subjt:  VLGGGLVPGSLVLVGGDPGVGKSTLLLQ-------------------SVEQIGNRADRLNI-----------------ETENLFLYSSTDVEDIFEKIQL

Query:  LSPRALIIDSIQTVYLQGVAGSAGGIGQVKECTSALLRFAKRTGIPILLIGHVNKSGEVAGPRVLEHIVDVVLYMEGEKCSSHRLLRPVKNRFGSTDELG
        L P+  IIDSIQ +Y   ++ + G + QV+ECT  L++ AKR  I + ++GHV K G +AGP+VLEH+VD VLY +G++ +SHRLLR VKNRFG+T E+G
Subjt:  LSPRALIIDSIQTVYLQGVAGSAGGIGQVKECTSALLRFAKRTGIPILLIGHVNKSGEVAGPRVLEHIVDVVLYMEGEKCSSHRLLRPVKNRFGSTDELG

Query:  VFEMLPSGLEVVSNPSEMFRRDHNANSNSEYLAGLAVAVIMDGTRTFLLEIQALC--LSRSSVARHVNGIQQSKADMIIAVLMKQAGLKLQDSVIFLNVV
        +FEM+ SGL+ V NPS++F       S  E+++G A+ V  +GTR  ++E+QAL    S +S  R   G+  ++   ++AVL K+ G+ L     +L+V 
Subjt:  VFEMLPSGLEVVSNPSEMFRRDHNANSNSEYLAGLAVAVIMDGTRTFLLEIQALC--LSRSSVARHVNGIQQSKADMIIAVLMKQAGLKLQDSVIFLNVV

Query:  SGVTLTETAGDLAIAVAI
         G+ + E A DLA+A+A+
Subjt:  SGVTLTETAGDLAIAVAI

Q48761 DNA repair protein RadA

1.4e-72

40.25

Show/hide

Query:  LKKKKSKVSWVCSNCGHNEGQWWGTCRSCDMVGTMKQFSEGNDSGGGSRGFEVSENVVRAWLPKQVTDEHPLRLTDVNRGINTLDWRLPLPGPFGNEVAR
        + K K    +VC  CG+   +W G C +C+    M +  E +     +                  T E P + T + +  +  + R+    P   E+ R
Subjt:  LKKKKSKVSWVCSNCGHNEGQWWGTCRSCDMVGTMKQFSEGNDSGGGSRGFEVSENVVRAWLPKQVTDEHPLRLTDVNRGINTLDWRLPLPGPFGNEVAR

Query:  VLGGGLVPGSLVLVGGDPGVGKSTLLLQ-------------------SVEQIGNRADRLNIETENLFLYSSTDVEDIFEKIQLLSPRALIIDSIQTVYLQ
        VLGGG+VPGS+VLVGGDPG+GKSTLLLQ                   S++Q   RA+RL +  +NL++Y+ T++E + E I  + P  ++IDSIQTVY  
Subjt:  VLGGGLVPGSLVLVGGDPGVGKSTLLLQ-------------------SVEQIGNRADRLNIETENLFLYSSTDVEDIFEKIQLLSPRALIIDSIQTVYLQ

Query:  GVAGSAGGIGQVKECTSALLRFAKRTGIPILLIGHVNKSGEVAGPRVLEHIVDVVLYMEGEKCSSHRLLRPVKNRFGSTDELGVFEMLPSGLEVVSNPSE
         V  +AG + QV+ECT+ L+R AK   I I ++GHV K G +AGPR+LEH+VD VLY EGE+  ++R+LR VKNRFGST+E+G+FEM   GL  V+NPSE
Subjt:  GVAGSAGGIGQVKECTSALLRFAKRTGIPILLIGHVNKSGEVAGPRVLEHIVDVVLYMEGEKCSSHRLLRPVKNRFGSTDELGVFEMLPSGLEVVSNPSE

Query:  MFRRDHNANSNSEYLAGLAVAVIMDGTRTFLLEIQALCLSR--SSVARHVNGIQQSKADMIIAVLMKQAGLKLQDSVIFLNVVSGVTLTETAGDLAIAVA
        +F  +       E  +G  V   M+GTR  L+EIQAL       +  R   GI  +K  +I+AVL K+ GL LQ+   +L    GV L E A DLA+AV+
Subjt:  MFRRDHNANSNSEYLAGLAVAVIMDGTRTFLLEIQALCLSR--SSVARHVNGIQQSKADMIIAVLMKQAGLKLQDSVIFLNVVSGVTLTETAGDLAIAVA

Query:  ICSRH
        + S +
Subjt:  ICSRH

Q92F42 DNA repair protein RadA

5.7e-74

40.74

Show/hide

Query:  LKKKKSKVSWVCSNCGHNEGQWWGTCRSCDMVGTMKQFSEGNDSGGGSRGFEVSENVVRAWLPKQVTDEHPLRLTDVNRGINTLDWRLPLPGPFGNEVAR
        + K K    +VC +CG+   +W G C +C+    M +  E   S      F  +    +A    Q+  E   R          ++  +P       E+ R
Subjt:  LKKKKSKVSWVCSNCGHNEGQWWGTCRSCDMVGTMKQFSEGNDSGGGSRGFEVSENVVRAWLPKQVTDEHPLRLTDVNRGINTLDWRLPLPGPFGNEVAR

Query:  VLGGGLVPGSLVLVGGDPGVGKSTLLLQ-------------------SVEQIGNRADRLNIETENLFLYSSTDVEDIFEKIQLLSPRALIIDSIQTVYLQ
        VLGGG+VPGS+VLVGGDPG+GKSTLLLQ                   S++Q   RA+RL +  +NL++Y+ T++E + E I  + P  ++IDSIQTVY  
Subjt:  VLGGGLVPGSLVLVGGDPGVGKSTLLLQ-------------------SVEQIGNRADRLNIETENLFLYSSTDVEDIFEKIQLLSPRALIIDSIQTVYLQ

Query:  GVAGSAGGIGQVKECTSALLRFAKRTGIPILLIGHVNKSGEVAGPRVLEHIVDVVLYMEGEKCSSHRLLRPVKNRFGSTDELGVFEMLPSGLEVVSNPSE
         V  +AG + QV+ECT+AL+R AK   I I ++GHV K G +AGPR+LEH+VD VLY EGE+  ++R+LR VKNRFGST+E+G+FEM   GL  V+NPSE
Subjt:  GVAGSAGGIGQVKECTSALLRFAKRTGIPILLIGHVNKSGEVAGPRVLEHIVDVVLYMEGEKCSSHRLLRPVKNRFGSTDELGVFEMLPSGLEVVSNPSE

Query:  MFRRDHNANSNSEYLAGLAVAVIMDGTRTFLLEIQALCLSR--SSVARHVNGIQQSKADMIIAVLMKQAGLKLQDSVIFLNVVSGVTLTETAGDLAIAVA
        +F  +       E  +G  V   M+GTR  L+EIQAL       +  R   GI  +K  +I+AVL K+ GL LQ+   +L    GV L E A DLA+AV+
Subjt:  MFRRDHNANSNSEYLAGLAVAVIMDGTRTFLLEIQALCLSR--SSVARHVNGIQQSKADMIIAVLMKQAGLKLQDSVIFLNVVSGVTLTETAGDLAIAVA

Query:  ICSRH
        + S +
Subjt:  ICSRH

Q9KGG1 DNA repair protein RadA

6.7e-75

Show/hide

Query:  KSKVSWVCSNCGHNEGQWWGTCRSCDMVGTM-KQFSEGNDSGGGSRGFEVSENVVRAWLPKQVTDEHPLRLTDVNRGINTLDWRLPLPGPFGNEVARVLG
        K K  ++C  CG+   +W G C  C    +M ++F+            EV     R+++        P  +T V R       + P       E+ RVLG
Subjt:  KSKVSWVCSNCGHNEGQWWGTCRSCDMVGTM-KQFSEGNDSGGGSRGFEVSENVVRAWLPKQVTDEHPLRLTDVNRGINTLDWRLPLPGPFGNEVARVLG

Query:  GGLVPGSLVLVGGDPGVGKSTLLLQ-------------------SVEQIGNRADRLNIETENLFLYSSTDVEDIFEKIQLLSPRALIIDSIQTVYLQGVA
        GG+VPGSLVLVGGDPG+GKSTLLLQ                   SV+Q   R+DRL + +++L++ + TD+E I + I  + P  +IIDSIQTVY   + 
Subjt:  GGLVPGSLVLVGGDPGVGKSTLLLQ-------------------SVEQIGNRADRLNIETENLFLYSSTDVEDIFEKIQLLSPRALIIDSIQTVYLQGVA

Query:  GSAGGIGQVKECTSALLRFAKRTGIPILLIGHVNKSGEVAGPRVLEHIVDVVLYMEGEKCSSHRLLRPVKNRFGSTDELGVFEMLPSGLEVVSNPSEMFR
         + G + QV+ECT++ +R AK TG+ I ++GHV K G +AGP++LEH+VD VLY EGE+  ++R+LR VKNRFGST+E+G+FEM  SGLE V+NPSE+F 
Subjt:  GSAGGIGQVKECTSALLRFAKRTGIPILLIGHVNKSGEVAGPRVLEHIVDVVLYMEGEKCSSHRLLRPVKNRFGSTDELGVFEMLPSGLEVVSNPSEMFR

Query:  RDHNANSNSEYLAGLAVAVIMDGTRTFLLEIQALC--LSRSSVARHVNGIQQSKADMIIAVLMKQAGLKLQDSVIFLNVVSGVTLTETAGDLAIAVAICS
         D ++      +AG  V   M+GTR  L+E+QAL    S  +  R   G+  ++  +++AVL K+ G+ LQ+   ++NV  GV L E A DL IAV+I S
Subjt:  RDHNANSNSEYLAGLAVAVIMDGTRTFLLEIQALC--LSRSSVARHVNGIQQSKADMIIAVLMKQAGLKLQDSVIFLNVVSGVTLTETAGDLAIAVAICS

Arabidopsis top hits

e value

%identity

Alignment

AT5G50340.1 ATP-dependent peptidases;nucleotide binding;serine-type endopeptidases;DNA helicases;ATP binding;damaged DNA binding;nucleoside-triphosphatases

2.2e-145

57.32

Show/hide

Query:  DPVTSKLLTQRVRSSSDRKEPEPIIGTQTFGASSRNGDGAEDIFKEKTSESVRKVGLGGGSICRQNLGKVV--GLKKKKSKVSWVCSNCGHNEGQWWGTC
        +PVT  +   R R    R    P+       +S+++ +   +    K   S  K    G +  R N G+VV    KK KSK  WVC +CGH+EGQWWG+C
Subjt:  DPVTSKLLTQRVRSSSDRKEPEPIIGTQTFGASSRNGDGAEDIFKEKTSESVRKVGLGGGSICRQNLGKVV--GLKKKKSKVSWVCSNCGHNEGQWWGTC

Query:  RSCDMVGTMKQFSEGNDS-----GGGSRGFEVSENVVRAWLPKQVTDEHPLRLTDVNRGINTLDWRLPLPGPFGNEVARVLGGGLVPGSLVLVGGDPGVG
        R+C  VGTMK+FSEG++S     GG   G   +E    +WLP+Q T + P RLTDV  GI    WR+ LPG FGNEVARVLGGGL PGSL+L+GGDPG+G
Subjt:  RSCDMVGTMKQFSEGNDS-----GGGSRGFEVSENVVRAWLPKQVTDEHPLRLTDVNRGINTLDWRLPLPGPFGNEVARVLGGGLVPGSLVLVGGDPGVG

Query:  KSTLLLQ------------------------SVEQIGNRADRLNIETENLFLYSSTDVEDIFEKIQLLSPRALIIDSIQTVYLQGVAGSAGGIGQVKECT
        KSTLLLQ                        SVEQIG+RADR+ I+TE L+L+SS+D++DI  K   LSPRALIIDSIQTVYL+ V GSAGG+ QVKECT
Subjt:  KSTLLLQ------------------------SVEQIGNRADRLNIETENLFLYSSTDVEDIFEKIQLLSPRALIIDSIQTVYLQGVAGSAGGIGQVKECT

Query:  SALLRFAKRTGIPILLIGHVNKSGEVAGPRVLEHIVDVVLYMEGEKCSSHRLLRPVKNRFGSTDELGVFEMLPSGLEVVSNPSEMFRRDHNANSNSEYLA
        S LLRFAK++ IP+ L+GHV K+G++AGPRVLEHIVDVVLY+EGE+ S++RLLR VKNRFGSTDELGVFEM  SGLEVVSNPS ++      N +S+ LA
Subjt:  SALLRFAKRTGIPILLIGHVNKSGEVAGPRVLEHIVDVVLYMEGEKCSSHRLLRPVKNRFGSTDELGVFEMLPSGLEVVSNPSEMFRRDHNANSNSEYLA

Query:  GLAVAVIMDGTRTFLLEIQALCLSRSSVARHVNGIQQSKADMIIAVLMKQAGLKLQDSVIFLNVVSGVTLTETAGDLAIAVAICS
        GLAVAV+MDG+R+FL+E+QALC   S+V+RHVNG+Q S+ADMIIAVLMKQAGL++Q++ IFLNV +G+ L+ETAGDLAIA AICS
Subjt:  GLAVAVIMDGTRTFLLEIQALCLSRSSVARHVNGIQQSKADMIIAVLMKQAGLKLQDSVIFLNVVSGVTLTETAGDLAIAVAICS

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGCAGCTCTTAGACATGAAATCCCTCAGAACAATTTTCAATTCTCGAAAGCACTTTCTCATTTCCACAACTTCCTCTTCTTATACTCCATCGTCCATCTCCTGCCGATC
CCGCCTGAACCCCAACTCTTCCCTCTTTCATTACGCCGGCCGTTTCAACACCGCGCAACTTTCCACCATCGGCGTCGATGCCCCGAACGGCGACCCCGTCGCCATTTCCG
GTACAGAAAATGGAAAGGCCCCCGATGTTTGGACTGTTTACGACCCCGTTACGAGTAAGCTTCTTACTCAAAGGGTCAGAAGCAGTAGCGATAGAAAAGAGCCCGAACCG
ATCATTGGAACTCAAACCTTCGGGGCTTCGTCGAGAAATGGAGATGGGGCCGAGGATATCTTCAAGGAGAAGACTTCGGAGAGCGTGAGGAAAGTGGGTTTAGGAGGTGG
GTCGATTTGCAGGCAGAATTTGGGGAAGGTTGTGGGATTGAAGAAGAAGAAGAGCAAAGTTTCTTGGGTTTGTTCGAACTGTGGGCATAATGAGGGGCAGTGGTGGGGAA
CTTGTCGGTCCTGTGATATGGTTGGGACAATGAAGCAATTTTCGGAGGGGAATGATAGCGGAGGAGGGAGTCGAGGGTTTGAAGTTTCAGAAAATGTGGTTCGAGCATGG
CTTCCAAAGCAGGTCACCGACGAGCATCCTTTGCGGTTGACAGATGTGAACCGAGGGATCAATACTCTGGATTGGAGACTTCCTTTGCCTGGTCCCTTTGGAAATGAAGT
GGCAAGGGTGCTCGGTGGTGGGCTGGTACCAGGTTCTCTTGTTTTGGTTGGTGGTGATCCTGGTGTTGGCAAGAGTACATTGTTGTTGCAGAGTGTGGAGCAAATTGGAA
ATAGAGCTGACCGATTGAATATTGAAACCGAGAATCTTTTCTTGTATTCAAGTACTGATGTTGAGGATATATTTGAGAAGATTCAGCTTCTATCTCCTAGAGCCTTGATC
ATTGATTCTATTCAAACAGTTTATTTGCAAGGAGTAGCTGGAAGTGCTGGAGGGATTGGACAGGTGAAGGAATGCACCTCGGCCCTTCTCCGTTTTGCAAAGAGAACTGG
CATCCCCATTTTATTGATTGGACATGTGAACAAATCAGGAGAAGTTGCTGGACCTCGAGTTCTGGAGCACATTGTGGATGTTGTACTGTATATGGAAGGGGAGAAATGCT
CGTCGCATCGGCTTCTACGACCAGTGAAGAACAGATTTGGATCGACAGACGAGCTTGGAGTATTTGAAATGTTGCCATCGGGACTGGAAGTGGTGTCAAATCCGAGTGAG
ATGTTTAGAAGGGATCACAATGCGAATTCAAATTCTGAGTATTTGGCAGGACTTGCTGTTGCAGTGATCATGGATGGAACCCGCACCTTCCTGCTTGAAATTCAGGCATT
GTGTTTGTCCAGATCCTCTGTTGCTAGACACGTTAATGGGATTCAACAAAGCAAGGCTGATATGATCATAGCAGTTCTCATGAAGCAAGCTGGGTTGAAGCTACAAGATA
GTGTCATTTTTTTAAATGTTGTGAGCGGGGTGACATTGACAGAGACCGCAGGAGATCTTGCAATTGCAGTGGCAATTTGCAGCAGGCATGTGATTTCAACTAATTCCACT
TAA

mRNA sequence

Show/hide mRNA sequence

Protein sequence

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MQLLDMKSLRTIFNSRKHFLISTTSSSYTPSSISCRSRLNPNSSLFHYAGRFNTAQLSTIGVDAPNGDPVAISGTENGKAPDVWTVYDPVTSKLLTQRVRSSSDRKEPEP
IIGTQTFGASSRNGDGAEDIFKEKTSESVRKVGLGGGSICRQNLGKVVGLKKKKSKVSWVCSNCGHNEGQWWGTCRSCDMVGTMKQFSEGNDSGGGSRGFEVSENVVRAW
LPKQVTDEHPLRLTDVNRGINTLDWRLPLPGPFGNEVARVLGGGLVPGSLVLVGGDPGVGKSTLLLQSVEQIGNRADRLNIETENLFLYSSTDVEDIFEKIQLLSPRALI
IDSIQTVYLQGVAGSAGGIGQVKECTSALLRFAKRTGIPILLIGHVNKSGEVAGPRVLEHIVDVVLYMEGEKCSSHRLLRPVKNRFGSTDELGVFEMLPSGLEVVSNPSE
MFRRDHNANSNSEYLAGLAVAVIMDGTRTFLLEIQALCLSRSSVARHVNGIQQSKADMIIAVLMKQAGLKLQDSVIFLNVVSGVTLTETAGDLAIAVAICSRHVISTNST

HG10002303 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome