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HG10002325 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10002325
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionGlutamate receptor
Genome locationChr11:5588590..5588775
RNA-Seq ExpressionHG10002325
SyntenyHG10002325
Gene Ontology termsGO:0034220 - ion transmembrane transport (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0015276 - ligand-gated ion channel activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004146855.2 glutamate receptor 2.7 isoform X1 [Cucumis sativus]8.6e-2189.09Show/hide
Query:  MTSPALRKNRRDENPEVKDVRFEPHPSPSCDSSYRNGGLSPCNLDDFHGDQSATP
        M+SPALRK R+DE PEVKDVRFEPHPSPSCDSSYRNGGLSPCN DDFHGDQ+ATP
Subjt:  MTSPALRKNRRDENPEVKDVRFEPHPSPSCDSSYRNGGLSPCNLDDFHGDQSATP

XP_008447592.1 PREDICTED: glutamate receptor 2.7-like [Cucumis melo]1.4e-1885.71Show/hide
Query:  MTSPALRKNRRDENPEVKDVRFEP-HPSPSCDSSYRNGGLSPCNLDDFHGDQSATP
        M+SPALRK R+DE PEVKDVRFEP HPSPSCDSSYRNGGLSPCN DDFHGDQ+ TP
Subjt:  MTSPALRKNRRDENPEVKDVRFEP-HPSPSCDSSYRNGGLSPCNLDDFHGDQSATP

XP_022148291.1 glutamate receptor 2.7-like [Momordica charantia]7.3e-2084.75Show/hide
Query:  SPALRKNRRDENPEVKDVRFEPHPSPSCDSSYRNGGLSPCNLDDFHGDQSATPQPSPSR
        SPALRKNR DE+PEVKDVRFEPHPSPSCDSSY N GLSPCN DDFHG+QS TP PS SR
Subjt:  SPALRKNRRDENPEVKDVRFEPHPSPSCDSSYRNGGLSPCNLDDFHGDQSATPQPSPSR

XP_031738896.1 glutamate receptor 2.7 isoform X2 [Cucumis sativus]8.6e-2189.09Show/hide
Query:  MTSPALRKNRRDENPEVKDVRFEPHPSPSCDSSYRNGGLSPCNLDDFHGDQSATP
        M+SPALRK R+DE PEVKDVRFEPHPSPSCDSSYRNGGLSPCN DDFHGDQ+ATP
Subjt:  MTSPALRKNRRDENPEVKDVRFEPHPSPSCDSSYRNGGLSPCNLDDFHGDQSATP

XP_038898636.1 glutamate receptor 2.7-like [Benincasa hispida]2.0e-2593.44Show/hide
Query:  MTSPALRKNRRDENPEVKDVRFEPHPSPSCDSSYRNGGLSPCNLDDFHGDQSATPQPSPSR
        +TSPALRKNR+DENPEVKDVRFEPHPSPSCDSSYRNGGLSPCN DDFH DQSATPQPSPSR
Subjt:  MTSPALRKNRRDENPEVKDVRFEPHPSPSCDSSYRNGGLSPCNLDDFHGDQSATPQPSPSR

TrEMBL top hitse value%identityAlignment
A0A0A0LFU4 Glutamate receptor4.2e-2189.09Show/hide
Query:  MTSPALRKNRRDENPEVKDVRFEPHPSPSCDSSYRNGGLSPCNLDDFHGDQSATP
        M+SPALRK R+DE PEVKDVRFEPHPSPSCDSSYRNGGLSPCN DDFHGDQ+ATP
Subjt:  MTSPALRKNRRDENPEVKDVRFEPHPSPSCDSSYRNGGLSPCNLDDFHGDQSATP

A0A1S3BHT8 Glutamate receptor6.6e-1985.71Show/hide
Query:  MTSPALRKNRRDENPEVKDVRFEP-HPSPSCDSSYRNGGLSPCNLDDFHGDQSATP
        M+SPALRK R+DE PEVKDVRFEP HPSPSCDSSYRNGGLSPCN DDFHGDQ+ TP
Subjt:  MTSPALRKNRRDENPEVKDVRFEP-HPSPSCDSSYRNGGLSPCNLDDFHGDQSATP

A0A5A7V5V8 Glutamate receptor6.6e-1985.71Show/hide
Query:  MTSPALRKNRRDENPEVKDVRFEP-HPSPSCDSSYRNGGLSPCNLDDFHGDQSATP
        M+SPALRK R+DE PEVKDVRFEP HPSPSCDSSYRNGGLSPCN DDFHGDQ+ TP
Subjt:  MTSPALRKNRRDENPEVKDVRFEP-HPSPSCDSSYRNGGLSPCNLDDFHGDQSATP

A0A6J1D4Y3 Glutamate receptor3.5e-2084.75Show/hide
Query:  SPALRKNRRDENPEVKDVRFEPHPSPSCDSSYRNGGLSPCNLDDFHGDQSATPQPSPSR
        SPALRKNR DE+PEVKDVRFEPHPSPSCDSSY N GLSPCN DDFHG+QS TP PS SR
Subjt:  SPALRKNRRDENPEVKDVRFEPHPSPSCDSSYRNGGLSPCNLDDFHGDQSATPQPSPSR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACTTCACCGGCATTGAGAAAGAATCGTCGAGACGAAAACCCAGAAGTTAAAGATGTCAGATTTGAACCCCATCCCAGCCCATCCTGTGATTCAAGCTACAGAAATGG
AGGACTTTCACCTTGTAACTTAGATGATTTTCATGGTGATCAGAGTGCAACTCCTCAGCCATCACCAAGCAGGTAA
mRNA sequenceShow/hide mRNA sequence
ATGACTTCACCGGCATTGAGAAAGAATCGTCGAGACGAAAACCCAGAAGTTAAAGATGTCAGATTTGAACCCCATCCCAGCCCATCCTGTGATTCAAGCTACAGAAATGG
AGGACTTTCACCTTGTAACTTAGATGATTTTCATGGTGATCAGAGTGCAACTCCTCAGCCATCACCAAGCAGGTAA
Protein sequenceShow/hide protein sequence
MTSPALRKNRRDENPEVKDVRFEPHPSPSCDSSYRNGGLSPCNLDDFHGDQSATPQPSPSR