; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

HG10002335 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10002335
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionRNase III domain-containing protein
Genome locationChr11:5695022..5699203
RNA-Seq ExpressionHG10002335
SyntenyHG10002335
Gene Ontology termsGO:0006396 - RNA processing (biological process)
GO:0090502 - RNA phosphodiester bond hydrolysis, endonucleolytic (biological process)
GO:0004525 - ribonuclease III activity (molecular function)
InterPro domainsIPR000999 - Ribonuclease III domain
IPR036389 - Ribonuclease III, endonuclease domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004146824.1 uncharacterized protein LOC101205919 [Cucumis sativus]2.7e-12295.8Show/hide
Query:  MVTLSATSTSIVASWDTQQRLSYNPNAPRNPNKKPNSLSLSPTSQATGNAALTATNIRTNQIVTDLLNRRNPSSIEGCKLVEPDGLYLGYEQWLPDPPKV
        MVTLSATSTSIVASWDTQQRLSYNPNAPRNPNKKP S S SPTSQATGNA LTATNIRTNQIV+DLLNRRNPSSIEGCKL EPDGLYLGY+QWLPDPPKV
Subjt:  MVTLSATSTSIVASWDTQQRLSYNPNAPRNPNKKPNSLSLSPTSQATGNAALTATNIRTNQIVTDLLNRRNPSSIEGCKLVEPDGLYLGYEQWLPDPPKV

Query:  QKPRSVFNAASLAYIGDCIYELYARRHFLFPPLSIEEFNDRVMAVVRCEAQDVLLQKLLNDNILTEAERDILRWGKNVGSSSKTRTKKRAGAAVYNRASS
        QKPRSVFNAASLAYIGDCIYELYARRHFLFPPLSIEE+NDRVMAVVRCEAQDVLLQKLLNDN LTEAERDILRWGKNVGSSSKTRTKKRAGAAVYNRASS
Subjt:  QKPRSVFNAASLAYIGDCIYELYARRHFLFPPLSIEEFNDRVMAVVRCEAQDVLLQKLLNDNILTEAERDILRWGKNVGSSSKTRTKKRAGAAVYNRASS

Query:  LETLIGYLYLNNVKRLDEIMQKLGFSTDSSLQLISEES
        LETLIGYLYLNNVKRLDEIMQKLGFSTDSSLQ+ISEES
Subjt:  LETLIGYLYLNNVKRLDEIMQKLGFSTDSSLQLISEES

XP_008447605.1 PREDICTED: uncharacterized protein LOC103490018 [Cucumis melo]9.2e-12395.04Show/hide
Query:  MVTLSATSTSIVASWDTQQRLSYNPNAPRNPNKKPNSLSLSPTSQATGNAALTATNIRTNQIVTDLLNRRNPSSIEGCKLVEPDGLYLGYEQWLPDPPKV
        MVTLSATSTSIVASWDTQQRLSYNPNAPRNPNKKPNSLS SPTSQ+TGNA LTATNIRT+QIV+DLLNRRN SSIEGCKL EPDGLYLGY+QWLPDPPKV
Subjt:  MVTLSATSTSIVASWDTQQRLSYNPNAPRNPNKKPNSLSLSPTSQATGNAALTATNIRTNQIVTDLLNRRNPSSIEGCKLVEPDGLYLGYEQWLPDPPKV

Query:  QKPRSVFNAASLAYIGDCIYELYARRHFLFPPLSIEEFNDRVMAVVRCEAQDVLLQKLLNDNILTEAERDILRWGKNVGSSSKTRTKKRAGAAVYNRASS
        QKPRSVFNAASLAYIGDCIYELYARRHFLFPPLSIEE+NDRVMAVVRCEAQDVLLQKLLNDN LT AERDILRWGKNVGSSSKTRTKKRAGAAVYNRASS
Subjt:  QKPRSVFNAASLAYIGDCIYELYARRHFLFPPLSIEEFNDRVMAVVRCEAQDVLLQKLLNDNILTEAERDILRWGKNVGSSSKTRTKKRAGAAVYNRASS

Query:  LETLIGYLYLNNVKRLDEIMQKLGFSTDSSLQLISEESNSPQ
        LETLIGYLYLNNVKRLDEIMQKLGFSTDSSLQLISEESNS Q
Subjt:  LETLIGYLYLNNVKRLDEIMQKLGFSTDSSLQLISEESNSPQ

XP_023526365.1 uncharacterized protein LOC111789879 [Cucurbita pepo subsp. pepo]5.3e-11891.32Show/hide
Query:  MVTLSATSTSIVASWDTQQRLSYNPNAPRNPNKKPNSLSLSPTSQATGNAALTATNIRTNQIVTDLLNRRNPSSIEGCKLVEPDGLYLGYEQWLPDPPKV
        M+TLSATSTSIVASWDTQQRL+YNPNAPRNPNKKP SLS+SPTSQ+TGNA LTATNIRTNQIV+DLL RR+P S EG K VEPDGLYLGYEQWLP+PPKV
Subjt:  MVTLSATSTSIVASWDTQQRLSYNPNAPRNPNKKPNSLSLSPTSQATGNAALTATNIRTNQIVTDLLNRRNPSSIEGCKLVEPDGLYLGYEQWLPDPPKV

Query:  QKPRSVFNAASLAYIGDCIYELYARRHFLFPPLSIEEFNDRVMAVVRCEAQDVLLQKLLNDNILTEAERDILRWGKNVGSSSKTRTKKRAGAAVYNRASS
        QKPRSVFNAASLAY+GDCIYELYARRHFLFP LSIEE+NDRVMAVVRCEAQDVLLQKLLNDN LTEAERDILRWGKNVGSSSKTRTKKRAGAAVYNRASS
Subjt:  QKPRSVFNAASLAYIGDCIYELYARRHFLFPPLSIEEFNDRVMAVVRCEAQDVLLQKLLNDNILTEAERDILRWGKNVGSSSKTRTKKRAGAAVYNRASS

Query:  LETLIGYLYLNNVKRLDEIMQKLGFSTDSSLQLISEESNSPQ
        LETLIGYLYLNNVKRLDEIM+KLGFSTDSSLQLI EESNS Q
Subjt:  LETLIGYLYLNNVKRLDEIMQKLGFSTDSSLQLISEESNSPQ

XP_038881983.1 uncharacterized protein LOC120073279 isoform X1 [Benincasa hispida]1.2e-12295.82Show/hide
Query:  MVTLSATSTSIVASWDTQQRLSYNPNAPRNPNKKPNSLSLSPTSQATGNAALTATNIRTNQIVTDLLNRRNPSSIEGCKLVEPDGLYLGYEQWLPDPPKV
        MVTLSATSTSIVASWDTQQRLSYNPNAP+NPNKKPNSLSLSPTSQ TGNA LTATNIRTNQIV+DLLNRRNPSSIEG KLVEPDGLYLGY+QWLPDPPKV
Subjt:  MVTLSATSTSIVASWDTQQRLSYNPNAPRNPNKKPNSLSLSPTSQATGNAALTATNIRTNQIVTDLLNRRNPSSIEGCKLVEPDGLYLGYEQWLPDPPKV

Query:  QKPRSVFNAASLAYIGDCIYELYARRHFLFPPLSIEEFNDRVMAVVRCEAQDVLLQKLLNDNILTEAERDILRWGKNVGSSSKTRTKKRAGAAVYNRASS
        QKPRSVFNAASLAYIGDCIYELYARRHFLFPPLSIEE+NDRVMAVVRCEAQDVLLQKLL DN LTE ERDILRWGKNVGSSSKTRTKKRAGAAVYNRASS
Subjt:  QKPRSVFNAASLAYIGDCIYELYARRHFLFPPLSIEEFNDRVMAVVRCEAQDVLLQKLLNDNILTEAERDILRWGKNVGSSSKTRTKKRAGAAVYNRASS

Query:  LETLIGYLYLNNVKRLDEIMQKLGFSTDSSLQLISEESN
        LETLIGYLYLNNVKRLDEIMQKLGFSTDSSLQLISEESN
Subjt:  LETLIGYLYLNNVKRLDEIMQKLGFSTDSSLQLISEESN

XP_038882062.1 uncharacterized protein LOC120073279 isoform X2 [Benincasa hispida]3.2e-12395.04Show/hide
Query:  MVTLSATSTSIVASWDTQQRLSYNPNAPRNPNKKPNSLSLSPTSQATGNAALTATNIRTNQIVTDLLNRRNPSSIEGCKLVEPDGLYLGYEQWLPDPPKV
        MVTLSATSTSIVASWDTQQRLSYNPNAP+NPNKKPNSLSLSPTSQ TGNA LTATNIRTNQIV+DLLNRRNPSSIEG KLVEPDGLYLGY+QWLPDPPKV
Subjt:  MVTLSATSTSIVASWDTQQRLSYNPNAPRNPNKKPNSLSLSPTSQATGNAALTATNIRTNQIVTDLLNRRNPSSIEGCKLVEPDGLYLGYEQWLPDPPKV

Query:  QKPRSVFNAASLAYIGDCIYELYARRHFLFPPLSIEEFNDRVMAVVRCEAQDVLLQKLLNDNILTEAERDILRWGKNVGSSSKTRTKKRAGAAVYNRASS
        QKPRSVFNAASLAYIGDCIYELYARRHFLFPPLSIEE+NDRVMAVVRCEAQDVLLQKLL DN LTE ERDILRWGKNVGSSSKTRTKKRAGAAVYNRASS
Subjt:  QKPRSVFNAASLAYIGDCIYELYARRHFLFPPLSIEEFNDRVMAVVRCEAQDVLLQKLLNDNILTEAERDILRWGKNVGSSSKTRTKKRAGAAVYNRASS

Query:  LETLIGYLYLNNVKRLDEIMQKLGFSTDSSLQLISEESNSPQ
        LETLIGYLYLNNVKRLDEIMQKLGFSTDSSLQLISEESN+ Q
Subjt:  LETLIGYLYLNNVKRLDEIMQKLGFSTDSSLQLISEESNSPQ

TrEMBL top hitse value%identityAlignment
A0A0A0LDF2 RNase III domain-containing protein1.3e-12295.8Show/hide
Query:  MVTLSATSTSIVASWDTQQRLSYNPNAPRNPNKKPNSLSLSPTSQATGNAALTATNIRTNQIVTDLLNRRNPSSIEGCKLVEPDGLYLGYEQWLPDPPKV
        MVTLSATSTSIVASWDTQQRLSYNPNAPRNPNKKP S S SPTSQATGNA LTATNIRTNQIV+DLLNRRNPSSIEGCKL EPDGLYLGY+QWLPDPPKV
Subjt:  MVTLSATSTSIVASWDTQQRLSYNPNAPRNPNKKPNSLSLSPTSQATGNAALTATNIRTNQIVTDLLNRRNPSSIEGCKLVEPDGLYLGYEQWLPDPPKV

Query:  QKPRSVFNAASLAYIGDCIYELYARRHFLFPPLSIEEFNDRVMAVVRCEAQDVLLQKLLNDNILTEAERDILRWGKNVGSSSKTRTKKRAGAAVYNRASS
        QKPRSVFNAASLAYIGDCIYELYARRHFLFPPLSIEE+NDRVMAVVRCEAQDVLLQKLLNDN LTEAERDILRWGKNVGSSSKTRTKKRAGAAVYNRASS
Subjt:  QKPRSVFNAASLAYIGDCIYELYARRHFLFPPLSIEEFNDRVMAVVRCEAQDVLLQKLLNDNILTEAERDILRWGKNVGSSSKTRTKKRAGAAVYNRASS

Query:  LETLIGYLYLNNVKRLDEIMQKLGFSTDSSLQLISEES
        LETLIGYLYLNNVKRLDEIMQKLGFSTDSSLQ+ISEES
Subjt:  LETLIGYLYLNNVKRLDEIMQKLGFSTDSSLQLISEES

A0A1S3BIG3 uncharacterized protein LOC1034900184.5e-12395.04Show/hide
Query:  MVTLSATSTSIVASWDTQQRLSYNPNAPRNPNKKPNSLSLSPTSQATGNAALTATNIRTNQIVTDLLNRRNPSSIEGCKLVEPDGLYLGYEQWLPDPPKV
        MVTLSATSTSIVASWDTQQRLSYNPNAPRNPNKKPNSLS SPTSQ+TGNA LTATNIRT+QIV+DLLNRRN SSIEGCKL EPDGLYLGY+QWLPDPPKV
Subjt:  MVTLSATSTSIVASWDTQQRLSYNPNAPRNPNKKPNSLSLSPTSQATGNAALTATNIRTNQIVTDLLNRRNPSSIEGCKLVEPDGLYLGYEQWLPDPPKV

Query:  QKPRSVFNAASLAYIGDCIYELYARRHFLFPPLSIEEFNDRVMAVVRCEAQDVLLQKLLNDNILTEAERDILRWGKNVGSSSKTRTKKRAGAAVYNRASS
        QKPRSVFNAASLAYIGDCIYELYARRHFLFPPLSIEE+NDRVMAVVRCEAQDVLLQKLLNDN LT AERDILRWGKNVGSSSKTRTKKRAGAAVYNRASS
Subjt:  QKPRSVFNAASLAYIGDCIYELYARRHFLFPPLSIEEFNDRVMAVVRCEAQDVLLQKLLNDNILTEAERDILRWGKNVGSSSKTRTKKRAGAAVYNRASS

Query:  LETLIGYLYLNNVKRLDEIMQKLGFSTDSSLQLISEESNSPQ
        LETLIGYLYLNNVKRLDEIMQKLGFSTDSSLQLISEESNS Q
Subjt:  LETLIGYLYLNNVKRLDEIMQKLGFSTDSSLQLISEESNSPQ

A0A6J1D2Y6 uncharacterized protein LOC111016851 isoform X16.1e-11286.29Show/hide
Query:  MVTLSATSTSIVASWDTQQRLSYNPNAPRNPNKKPNSLSLSPTSQATGNAALTATNIRTNQIVTDLLNRRNPSSIEGCKLVEPDGLYLGYEQWLPDPPKV
        M+TLSATSTS+VASWDTQQRLSYNPNAPR P KKP++L+LSPTSQATGN  L A N+R +QIV+DLL RR+PS IEG K VEP+GLYLG EQWLP+PPKV
Subjt:  MVTLSATSTSIVASWDTQQRLSYNPNAPRNPNKKPNSLSLSPTSQATGNAALTATNIRTNQIVTDLLNRRNPSSIEGCKLVEPDGLYLGYEQWLPDPPKV

Query:  QKPRSVFNAASLAYIGDCIYELYARRHFLFPPLSIEEFNDRVMAVVRCEAQDVLLQKLLNDNILTEAERDILRWGKNVGSSSKTRTKKRAGAAVYNRASS
        QKPRSVFNAASLAYIGDCIYELYARRHFLFPPL+IEE+NDRVMAVVRCEAQD+LLQKLLNDN LTEAERDILRWGKNVG SSKTRTKKRAGAAVYNRASS
Subjt:  QKPRSVFNAASLAYIGDCIYELYARRHFLFPPLSIEEFNDRVMAVVRCEAQDVLLQKLLNDNILTEAERDILRWGKNVGSSSKTRTKKRAGAAVYNRASS

Query:  LETLIGYLYLNNVKRLDEIMQKLGFSTDSSLQLISEESNSPQWTRVLD
        LETLIGYLYLNNVKRLDEIMQKLGFSTDSSLQLISEESNS Q  ++ D
Subjt:  LETLIGYLYLNNVKRLDEIMQKLGFSTDSSLQLISEESNSPQWTRVLD

A0A6J1GYR2 uncharacterized protein LOC1114580656.9e-11689.67Show/hide
Query:  MVTLSATSTSIVASWDTQQRLSYNPNAPRNPNKKPNSLSLSPTSQATGNAALTATNIRTNQIVTDLLNRRNPSSIEGCKLVEPDGLYLGYEQWLPDPPKV
        M TL+ATSTSIVASWDTQQRL+YNPNA RNPNKKP SLS+SPTSQ+TGNA LTATNIRTNQIV+DLL RR+P S EG K VEPDGLYLGYEQWLP+PPKV
Subjt:  MVTLSATSTSIVASWDTQQRLSYNPNAPRNPNKKPNSLSLSPTSQATGNAALTATNIRTNQIVTDLLNRRNPSSIEGCKLVEPDGLYLGYEQWLPDPPKV

Query:  QKPRSVFNAASLAYIGDCIYELYARRHFLFPPLSIEEFNDRVMAVVRCEAQDVLLQKLLNDNILTEAERDILRWGKNVGSSSKTRTKKRAGAAVYNRASS
        QKPRSVFNAASLAY+GDCIYELYARRHFLFP L+IEE+NDRVMAVVRCEAQDVLLQKLLNDN LTEAERDILRWGKNVGSSSKTRTKKRAGAAVYNRASS
Subjt:  QKPRSVFNAASLAYIGDCIYELYARRHFLFPPLSIEEFNDRVMAVVRCEAQDVLLQKLLNDNILTEAERDILRWGKNVGSSSKTRTKKRAGAAVYNRASS

Query:  LETLIGYLYLNNVKRLDEIMQKLGFSTDSSLQLISEESNSPQ
        LETLIGYLYLNNV+RLDEIM+KLGFSTDSSLQLI EESNS Q
Subjt:  LETLIGYLYLNNVKRLDEIMQKLGFSTDSSLQLISEESNSPQ

A0A6J1J002 uncharacterized protein LOC1114799934.8e-11790.5Show/hide
Query:  MVTLSATSTSIVASWDTQQRLSYNPNAPRNPNKKPNSLSLSPTSQATGNAALTATNIRTNQIVTDLLNRRNPSSIEGCKLVEPDGLYLGYEQWLPDPPKV
        M+TLSATSTSIVASWDTQQRL+YNPNAPRNPNKKP SLS+SPTSQ+TG A LTATNIRTNQIV+DLL RR+P S EG K VEPDGLYLGYEQWLP+PPKV
Subjt:  MVTLSATSTSIVASWDTQQRLSYNPNAPRNPNKKPNSLSLSPTSQATGNAALTATNIRTNQIVTDLLNRRNPSSIEGCKLVEPDGLYLGYEQWLPDPPKV

Query:  QKPRSVFNAASLAYIGDCIYELYARRHFLFPPLSIEEFNDRVMAVVRCEAQDVLLQKLLNDNILTEAERDILRWGKNVGSSSKTRTKKRAGAAVYNRASS
        QKPRSVFNAASLAY+GDCIYELYARRHFLFP L+IEE+NDRVMAVVRCEAQDVLLQKLLNDN LTEAERDILRWGKNVGSSSKTRTKKRAGAAVYNRASS
Subjt:  QKPRSVFNAASLAYIGDCIYELYARRHFLFPPLSIEEFNDRVMAVVRCEAQDVLLQKLLNDNILTEAERDILRWGKNVGSSSKTRTKKRAGAAVYNRASS

Query:  LETLIGYLYLNNVKRLDEIMQKLGFSTDSSLQLISEESNSPQ
        LETLIGYLYLNNVKRLDEIM+KLGFSTDSSLQLI EESNS Q
Subjt:  LETLIGYLYLNNVKRLDEIMQKLGFSTDSSLQLISEESNSPQ

SwissProt top hitse value%identityAlignment
P74327 Mini-ribonuclease 34.4e-1944Show/hide
Query:  DPPKVQKPRSVFNAASLAYIGDCIYELYARRHFLFPPLSIEEFNDRVMAVVRCEAQDVLLQKLLNDNILTEAERDILRWGKNVGSSSKTRTKKRAGAAVY
        D P VQ      +  +LAY+GD ++ELY R  +LFPP  I +F+ RV+A VR E Q  +L  LL    LT+ E++ +R G+N  +S    T +RA   +Y
Subjt:  DPPKVQKPRSVFNAASLAYIGDCIYELYARRHFLFPPLSIEEFNDRVMAVVRCEAQDVLLQKLLNDNILTEAERDILRWGKNVGSSSKTRTKKRAGAAVY

Query:  NRASSLETLIGYLYLNNVKRLDEIM
          AS LETL+GYLYL + +RLDE++
Subjt:  NRASSLETLIGYLYLNNVKRLDEIM

Q05370 Mini-ribonuclease 39.0e-1237.72Show/hide
Query:  ASLAYIGDCIYELYARRHFLFPPLSIEEFNDRVMAVVRCEAQDVLLQKLLNDNILTEAERDILRWGKNVGSSSKTRTKKRAGAAVYNRASSLETLIGYLY
        ++LAY GD +YEL+ R  FL PP  I  ++ +V+A VR E+Q   +  L      T AE  I R G+N  +       KR  A +Y +A+  E L+GYLY
Subjt:  ASLAYIGDCIYELYARRHFLFPPLSIEEFNDRVMAVVRCEAQDVLLQKLLNDNILTEAERDILRWGKNVGSSSKTRTKKRAGAAVYNRASSLETLIGYLY

Query:  LNNVKRLDEIMQKL
        L + +RL +++  L
Subjt:  LNNVKRLDEIMQKL

Q2RFM4 Mini-ribonuclease 33.2e-0937.29Show/hide
Query:  SLAYIGDCIYELYARRHFL-FPPLSIEEFNDRVMAVVRCEAQDVLLQKLLNDNILTEAERDILRWGKNVGSSSKTRTKKRAGAAVYNRASSLETLIGYLY
        +LAY+GD +YEL  R H +   P   E+ +   +  VR  AQ  ++  L  +  LT AE+DILR G+N       RT   A  A Y+ +++LE+L+GYLY
Subjt:  SLAYIGDCIYELYARRHFL-FPPLSIEEFNDRVMAVVRCEAQDVLLQKLLNDNILTEAERDILRWGKNVGSSSKTRTKKRAGAAVYNRASSLETLIGYLY

Query:  LN----NVKRLDEIMQKL
        L      V+ L  ++ KL
Subjt:  LN----NVKRLDEIMQKL

Q5N0K8 Mini-ribonuclease 36.9e-1238.05Show/hide
Query:  SLAYIGDCIYELYARRHFLFPPLSIEEFNDRVMAVVRCEAQDVLLQKLLNDNILTEAERDILRWGKNVGSSSKTRTKKRAGAAVYNRASSLETLIGYLYL
        +LAY+GD +YE + R   L P     + +  V+  VR E Q  LL  LL   +LT  E +I+R G+N       R  +R     Y +A+ LETL+GYLYL
Subjt:  SLAYIGDCIYELYARRHFLFPPLSIEEFNDRVMAVVRCEAQDVLLQKLLNDNILTEAERDILRWGKNVGSSSKTRTKKRAGAAVYNRASSLETLIGYLYL

Query:  NNVKRLDEIMQKL
         + +RL  ++Q+L
Subjt:  NNVKRLDEIMQKL

Q8DLQ0 Mini-ribonuclease 37.1e-1737.42Show/hide
Query:  LGYEQWLP-DPPKVQKPRSVFNAASLAYIGDCIYELYARRHFLFPPLSIEEFNDRVMAVVRCEAQDVLLQKLLNDNILTEAERDILRWGKNVGSSSKTRT
        L + + LP  PP +  P      A+LAY GD +YEL+ R  FL PP  I  ++ +V+A VR E+Q   +  L      TE ER I R G+N  +      
Subjt:  LGYEQWLP-DPPKVQKPRSVFNAASLAYIGDCIYELYARRHFLFPPLSIEEFNDRVMAVVRCEAQDVLLQKLLNDNILTEAERDILRWGKNVGSSSKTRT

Query:  KKRAGAAVYNRASSLETLIGYLYLNNVKRLDEIMQKLGFSTDSSLQLISEESNSP
         KR  A +Y +A+  E L+GYLYL N +RL EI Q L     S ++  +  + SP
Subjt:  KKRAGAAVYNRASSLETLIGYLYLNNVKRLDEIMQKLGFSTDSSLQLISEESNSP

Arabidopsis top hitse value%identityAlignment
AT1G55140.1 Ribonuclease III family protein1.4e-7162.24Show/hide
Query:  MVTLSATSTSIVASWDTQQRLSYNPNAPRNPNKKPNSLSLSPTSQATGNAALTATNIRTNQIVTDLLNRRNPSSI-EGCKLVEPDGLYLGYEQWLPDPPK
        M  LSA+ST + A+ DTQ +L YNPNAPRN  K  N  S  P S  + ++   ATN+  +  V+DLL R     I +G      D   +GYE+W P PPK
Subjt:  MVTLSATSTSIVASWDTQQRLSYNPNAPRNPNKKPNSLSLSPTSQATGNAALTATNIRTNQIVTDLLNRRNPSSI-EGCKLVEPDGLYLGYEQWLPDPPK

Query:  VQKPRSVFNAASLAYIGDCIYELYARRHFLFPPLSIEEFNDRVMAVVRCEAQDVLLQKLLNDNILTEAERDILRWGKNVGSSSKTRTKKRAGAAVYNRAS
        V+KPRSVFNAASLAYIGD IYE+YARRHFLFPPLSIEE+NDRV AVVRCEAQ  LLQKL++D+ LT+ ERDILRWGKNVG S KTR+ +RAG AVYN+AS
Subjt:  VQKPRSVFNAASLAYIGDCIYELYARRHFLFPPLSIEEFNDRVMAVVRCEAQDVLLQKLLNDNILTEAERDILRWGKNVGSSSKTRTKKRAGAAVYNRAS

Query:  SLETLIGYLYLNNVKRLDEIMQKLGFSTDSSLQLISEESNS
        SLETLIGYLYL+N KRL+E+MQKLGFS+ SS + + +E+ S
Subjt:  SLETLIGYLYLNNVKRLDEIMQKLGFSTDSSLQLISEESNS

AT1G55140.2 Ribonuclease III family protein8.3e-4557.63Show/hide
Query:  MVTLSATSTSIVASWDTQQRLSYNPNAPRNPNKKPNSLSLSPTSQATGNAALTATNIRTNQIVTDLLNRRNPSSI-EGCKLVEPDGLYLGYEQWLPDPPK
        M  LSA+ST + A+ DTQ +L YNPNAPRN  K  N  S  P S  + ++   ATN+  +  V+DLL R     I +G      D   +GYE+W P PPK
Subjt:  MVTLSATSTSIVASWDTQQRLSYNPNAPRNPNKKPNSLSLSPTSQATGNAALTATNIRTNQIVTDLLNRRNPSSI-EGCKLVEPDGLYLGYEQWLPDPPK

Query:  VQKPRSVFNAASLAYIGDCIYELYARRHFLFPPLSIEEFNDRVMAVVRCEAQDVLLQKLLNDNILTEAERDILRWGK
        V+KPRSVFNAASLAYIGD IYE+YARRHFLFPPLSIEE+NDRV AVVRCEAQ  LLQKL++D+ LT+ ER I   G+
Subjt:  VQKPRSVFNAASLAYIGDCIYELYARRHFLFPPLSIEEFNDRVMAVVRCEAQDVLLQKLLNDNILTEAERDILRWGK

AT3G13740.1 Ribonuclease III family protein1.0e-7161.92Show/hide
Query:  MVTLSATSTSIVASWDTQQRLSYNPNAPRNPNKKPNSLSLSPTSQATGNAALTATNIRTNQIVTDLLNRRNPSSIEGCKLVEPDGLYLGYEQWLPDPPKV
        MV LSA+ST + A+ DTQ RL YNPNAPR   K PN  S  P      +  ++ +       V DLL R  PSS E    V+ D  Y+GYE W P PPK+
Subjt:  MVTLSATSTSIVASWDTQQRLSYNPNAPRNPNKKPNSLSLSPTSQATGNAALTATNIRTNQIVTDLLNRRNPSSIEGCKLVEPDGLYLGYEQWLPDPPKV

Query:  QKPRSVFNAASLAYIGDCIYELYARRHFLFPPLSIEEFNDRVMAVVRCEAQDVLLQKLLNDNILTEAERDILRWGKNVGSSSKTRTKKRAGAAVYNRASS
        +KPRSVFN ASLA+IGD IYELYARRHFLFPPLSIE++NDRV AVVRCEAQ  LL KL++D+ LT+ ERDILRWGKN+G S++TRT++RAG AVYN+ASS
Subjt:  QKPRSVFNAASLAYIGDCIYELYARRHFLFPPLSIEEFNDRVMAVVRCEAQDVLLQKLLNDNILTEAERDILRWGKNVGSSSKTRTKKRAGAAVYNRASS

Query:  LETLIGYLYLNNVKRLDEIMQKLGFSTDSSLQLISEESN
        LETLIGYLYL N KRL++IM+KLGFS+DSS +++ EE+N
Subjt:  LETLIGYLYLNNVKRLDEIMQKLGFSTDSSLQLISEESN

AT3G13740.2 Ribonuclease III family protein2.9e-6659.41Show/hide
Query:  MVTLSATSTSIVASWDTQQRLSYNPNAPRNPNKKPNSLSLSPTSQATGNAALTATNIRTNQIVTDLLNRRNPSSIEGCKLVEPDGLYLGYEQWLPDPPKV
        MV LSA+ST + A+ DTQ RL YNPNAPR   K PN  S  P      +  ++ +       V DLL R  PSS E    V+ D  Y+GYE W P PPK+
Subjt:  MVTLSATSTSIVASWDTQQRLSYNPNAPRNPNKKPNSLSLSPTSQATGNAALTATNIRTNQIVTDLLNRRNPSSIEGCKLVEPDGLYLGYEQWLPDPPKV

Query:  QKPRSVFNAASLAYIGDCIYELYARRHFLFPPLSIEEFNDRVMAVVRCEAQDVLLQKLLNDNILTEAERDILRWGKNVGSSSKTRTKKRAGAAVYNRASS
        +KPRSVFN ASLA+IGD IYELYARRHFLFPPLSIE++NDRV AV        LL KL++D+ LT+ ERDILRWGKN+G S++TRT++RAG AVYN+ASS
Subjt:  QKPRSVFNAASLAYIGDCIYELYARRHFLFPPLSIEEFNDRVMAVVRCEAQDVLLQKLLNDNILTEAERDILRWGKNVGSSSKTRTKKRAGAAVYNRASS

Query:  LETLIGYLYLNNVKRLDEIMQKLGFSTDSSLQLISEESN
        LETLIGYLYL N KRL++IM+KLGFS+DSS +++ EE+N
Subjt:  LETLIGYLYLNNVKRLDEIMQKLGFSTDSSLQLISEESN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTAACTTTATCGGCGACTTCGACGAGCATCGTTGCTTCATGGGACACTCAACAAAGGCTTTCGTACAATCCCAATGCCCCAAGAAACCCCAACAAGAAACCCAATTC
TCTATCTCTTTCGCCGACCTCACAAGCCACCGGAAATGCTGCCTTAACCGCAACGAACATTCGAACCAACCAAATTGTTACCGACCTCCTCAACCGTCGCAATCCCAGCT
CAATTGAAGGCTGCAAATTAGTGGAGCCAGATGGTCTCTATTTGGGATATGAGCAGTGGTTGCCAGATCCACCAAAGGTGCAGAAGCCCCGATCTGTGTTCAATGCAGCT
TCATTAGCATATATTGGCGATTGCATCTATGAGCTATATGCTCGCAGGCACTTTCTGTTCCCTCCATTGAGTATTGAAGAATTCAATGACCGTGTTATGGCTGTTGTACG
ATGTGAAGCACAAGATGTTCTACTCCAGAAACTTCTAAATGATAATATCTTAACAGAGGCAGAGAGGGACATCCTTCGATGGGGGAAAAATGTTGGTTCCTCCTCTAAAA
CACGTACAAAAAAACGTGCTGGTGCTGCAGTTTATAATAGAGCATCTTCGCTAGAAACCTTAATTGGTTACCTTTACCTGAACAATGTGAAACGGTTGGATGAAATCATG
CAAAAGCTCGGCTTCTCAACTGATTCGTCCTTGCAATTAATTTCAGAGGAATCAAATAGCCCACAATGGACAAGAGTTTTGGATATGGCTTACTTCATTCAAAGATTAAC
ACCTCTCTTGAATGTGTGGCAATCTCATCCCAATTTCAAGGATAACTCTTACTCTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGTAACTTTATCGGCGACTTCGACGAGCATCGTTGCTTCATGGGACACTCAACAAAGGCTTTCGTACAATCCCAATGCCCCAAGAAACCCCAACAAGAAACCCAATTC
TCTATCTCTTTCGCCGACCTCACAAGCCACCGGAAATGCTGCCTTAACCGCAACGAACATTCGAACCAACCAAATTGTTACCGACCTCCTCAACCGTCGCAATCCCAGCT
CAATTGAAGGCTGCAAATTAGTGGAGCCAGATGGTCTCTATTTGGGATATGAGCAGTGGTTGCCAGATCCACCAAAGGTGCAGAAGCCCCGATCTGTGTTCAATGCAGCT
TCATTAGCATATATTGGCGATTGCATCTATGAGCTATATGCTCGCAGGCACTTTCTGTTCCCTCCATTGAGTATTGAAGAATTCAATGACCGTGTTATGGCTGTTGTACG
ATGTGAAGCACAAGATGTTCTACTCCAGAAACTTCTAAATGATAATATCTTAACAGAGGCAGAGAGGGACATCCTTCGATGGGGGAAAAATGTTGGTTCCTCCTCTAAAA
CACGTACAAAAAAACGTGCTGGTGCTGCAGTTTATAATAGAGCATCTTCGCTAGAAACCTTAATTGGTTACCTTTACCTGAACAATGTGAAACGGTTGGATGAAATCATG
CAAAAGCTCGGCTTCTCAACTGATTCGTCCTTGCAATTAATTTCAGAGGAATCAAATAGCCCACAATGGACAAGAGTTTTGGATATGGCTTACTTCATTCAAAGATTAAC
ACCTCTCTTGAATGTGTGGCAATCTCATCCCAATTTCAAGGATAACTCTTACTCTTAG
Protein sequenceShow/hide protein sequence
MVTLSATSTSIVASWDTQQRLSYNPNAPRNPNKKPNSLSLSPTSQATGNAALTATNIRTNQIVTDLLNRRNPSSIEGCKLVEPDGLYLGYEQWLPDPPKVQKPRSVFNAA
SLAYIGDCIYELYARRHFLFPPLSIEEFNDRVMAVVRCEAQDVLLQKLLNDNILTEAERDILRWGKNVGSSSKTRTKKRAGAAVYNRASSLETLIGYLYLNNVKRLDEIM
QKLGFSTDSSLQLISEESNSPQWTRVLDMAYFIQRLTPLLNVWQSHPNFKDNSYS