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HG10002360 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10002360
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionEpidermal patterning factor-like protein
Genome locationChr11:5984616..5985202
RNA-Seq ExpressionHG10002360
SyntenyHG10002360
Gene Ontology termsGO:0010052 - guard cell differentiation (biological process)
GO:0005576 - extracellular region (cellular component)
InterPro domainsIPR039455 - EPIDERMAL PATTERNING FACTOR-like protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004146810.1 EPIDERMAL PATTERNING FACTOR-like protein 3 [Cucumis sativus]3.0e-5486.67Show/hide
Query:  MKAAYWCFILILQLTCWVSAAARTFAPNHALLPHKQQGLISGSLDSKEAVKGVNEEAFYRGMRKIGSSPPSCEHKCYGCIPCEAIQVP-TINRRSHVGVQ
        MK  YWCFI ILQL CWVSAAAR FAPN AL PHKQQGLI    DSK+AVKGV EE FYRGMRKIGSSPPSCEHKCYGCIPCEAIQVP T NRRSHVGVQ
Subjt:  MKAAYWCFILILQLTCWVSAAARTFAPNHALLPHKQQGLISGSLDSKEAVKGVNEEAFYRGMRKIGSSPPSCEHKCYGCIPCEAIQVP-TINRRSHVGVQ

Query:  YTNYEPEGWKCKCGPSFYSP
        YTNYEPEGWKCKCGPSFYSP
Subjt:  YTNYEPEGWKCKCGPSFYSP

XP_008447616.1 PREDICTED: EPIDERMAL PATTERNING FACTOR-like protein 3 [Cucumis melo]2.6e-5383.33Show/hide
Query:  MKAAYWCFILILQLTCWVSAAARTFAPNHALLPHKQQGLISGSLDSKEAVKGVNEEAFYRGMRKIGSSPPSCEHKCYGCIPCEAIQVP-TINRRSHVGVQ
        MK  YWCFI ILQL CWVSAAARTFAPN ALLPHKQ     G ++SK+AVKG+ EE FYRGMRKIGSSPPSCEHKCYGCIPCEAIQVP T NRRSH+GVQ
Subjt:  MKAAYWCFILILQLTCWVSAAARTFAPNHALLPHKQQGLISGSLDSKEAVKGVNEEAFYRGMRKIGSSPPSCEHKCYGCIPCEAIQVP-TINRRSHVGVQ

Query:  YTNYEPEGWKCKCGPSFYSP
        YTNYEPEGWKCKCGPSFYSP
Subjt:  YTNYEPEGWKCKCGPSFYSP

XP_022152671.1 EPIDERMAL PATTERNING FACTOR-like protein 3 [Momordica charantia]1.3e-4474.8Show/hide
Query:  MKAAYWCFILILQL--TCWVSAAARTFAPNHA--LLPHKQQGLISGSLDSKEAVKGVNEEAFYRGMRKIGSSPPSCEHKCYGCIPCEAIQVPTINRRSHV
        MK  + CFIL LQ+  +CWVSAA R FAPNHA  LLPHK QGLISGS DSKE  + VN     RGMR+IGSSPPSC+HKCYGC PCEAIQVPT +R SH+
Subjt:  MKAAYWCFILILQL--TCWVSAAARTFAPNHA--LLPHKQQGLISGSLDSKEAVKGVNEEAFYRGMRKIGSSPPSCEHKCYGCIPCEAIQVPTINRRSHV

Query:  GVQYTNYEPEGWKCKCGPSFYSP
        GVQYTNYEPEGWKCKCGPSFYSP
Subjt:  GVQYTNYEPEGWKCKCGPSFYSP

XP_023526549.1 EPIDERMAL PATTERNING FACTOR-like protein 2 [Cucurbita pepo subsp. pepo]4.5e-4273.39Show/hide
Query:  MKAAY---WCFILILQLTCWVSAAARTFAPNHALLPHKQQGLISGSLDSKEAVKG--VNEEAFYRGMRKIGSSPPSCEHKCYGCIPCEAIQVPTINRRSH
        MK  Y    CFIL LQL CWVSAA  TF    ALLPHKQQG    ++DS +AV+   V E   YRGMRKIGSSPPSCEHKCYGC PCEAIQVPT NRRSH
Subjt:  MKAAY---WCFILILQLTCWVSAAARTFAPNHALLPHKQQGLISGSLDSKEAVKG--VNEEAFYRGMRKIGSSPPSCEHKCYGCIPCEAIQVPTINRRSH

Query:  VGVQYTNYEPEGWKCKCGPSFYSP
        VG+QYTNYEPEGWKCKCGPSFYSP
Subjt:  VGVQYTNYEPEGWKCKCGPSFYSP

XP_038904354.1 EPIDERMAL PATTERNING FACTOR-like protein 3 isoform X1 [Benincasa hispida]3.3e-6194.17Show/hide
Query:  MKAAYWCFILILQLTCWVSAAARTFAPNHALLPHKQQGLISGSLDSKEAVKGVNEEAFYRGMRKIGSSPPSCEHKCYGCIPCEAIQVPT-INRRSHVGVQ
        MK  YWCFILILQL CWVSAAARTFAPNHALLPHKQQGLISGSLDSKEA KGVNEEAFYRGMRKIGSSPPSCEHKCYGCIPCEAIQVPT  NR SHVGVQ
Subjt:  MKAAYWCFILILQLTCWVSAAARTFAPNHALLPHKQQGLISGSLDSKEAVKGVNEEAFYRGMRKIGSSPPSCEHKCYGCIPCEAIQVPT-INRRSHVGVQ

Query:  YTNYEPEGWKCKCGPSFYSP
        YTNYEPEGWKCKCGPSFYSP
Subjt:  YTNYEPEGWKCKCGPSFYSP

TrEMBL top hitse value%identityAlignment
A0A1S3BIS6 Epidermal patterning factor-like protein1.2e-5383.33Show/hide
Query:  MKAAYWCFILILQLTCWVSAAARTFAPNHALLPHKQQGLISGSLDSKEAVKGVNEEAFYRGMRKIGSSPPSCEHKCYGCIPCEAIQVP-TINRRSHVGVQ
        MK  YWCFI ILQL CWVSAAARTFAPN ALLPHKQ     G ++SK+AVKG+ EE FYRGMRKIGSSPPSCEHKCYGCIPCEAIQVP T NRRSH+GVQ
Subjt:  MKAAYWCFILILQLTCWVSAAARTFAPNHALLPHKQQGLISGSLDSKEAVKGVNEEAFYRGMRKIGSSPPSCEHKCYGCIPCEAIQVP-TINRRSHVGVQ

Query:  YTNYEPEGWKCKCGPSFYSP
        YTNYEPEGWKCKCGPSFYSP
Subjt:  YTNYEPEGWKCKCGPSFYSP

A0A5D3BVF6 Epidermal patterning factor-like protein1.2e-5383.33Show/hide
Query:  MKAAYWCFILILQLTCWVSAAARTFAPNHALLPHKQQGLISGSLDSKEAVKGVNEEAFYRGMRKIGSSPPSCEHKCYGCIPCEAIQVP-TINRRSHVGVQ
        MK  YWCFI ILQL CWVSAAARTFAPN ALLPHKQ     G ++SK+AVKG+ EE FYRGMRKIGSSPPSCEHKCYGCIPCEAIQVP T NRRSH+GVQ
Subjt:  MKAAYWCFILILQLTCWVSAAARTFAPNHALLPHKQQGLISGSLDSKEAVKGVNEEAFYRGMRKIGSSPPSCEHKCYGCIPCEAIQVP-TINRRSHVGVQ

Query:  YTNYEPEGWKCKCGPSFYSP
        YTNYEPEGWKCKCGPSFYSP
Subjt:  YTNYEPEGWKCKCGPSFYSP

A0A6J1DIF6 Epidermal patterning factor-like protein6.2e-4574.8Show/hide
Query:  MKAAYWCFILILQL--TCWVSAAARTFAPNHA--LLPHKQQGLISGSLDSKEAVKGVNEEAFYRGMRKIGSSPPSCEHKCYGCIPCEAIQVPTINRRSHV
        MK  + CFIL LQ+  +CWVSAA R FAPNHA  LLPHK QGLISGS DSKE  + VN     RGMR+IGSSPPSC+HKCYGC PCEAIQVPT +R SH+
Subjt:  MKAAYWCFILILQL--TCWVSAAARTFAPNHA--LLPHKQQGLISGSLDSKEAVKGVNEEAFYRGMRKIGSSPPSCEHKCYGCIPCEAIQVPTINRRSHV

Query:  GVQYTNYEPEGWKCKCGPSFYSP
        GVQYTNYEPEGWKCKCGPSFYSP
Subjt:  GVQYTNYEPEGWKCKCGPSFYSP

A0A6J1GTM4 Epidermal patterning factor-like protein1.9e-4172.58Show/hide
Query:  MKAAY---WCFILILQLTCWVSAAARTFAPNHALLPHKQQGLISGSLDSKEAVKG--VNEEAFYRGMRKIGSSPPSCEHKCYGCIPCEAIQVPTINRRSH
        MK  Y    CFIL LQL CWVSAA  TF    ALLPHKQQG    + DS +AV+   V     YRGMRKIGSSPPSCEHKCYGC PCEAIQVPT NRRSH
Subjt:  MKAAY---WCFILILQLTCWVSAAARTFAPNHALLPHKQQGLISGSLDSKEAVKG--VNEEAFYRGMRKIGSSPPSCEHKCYGCIPCEAIQVPTINRRSH

Query:  VGVQYTNYEPEGWKCKCGPSFYSP
        VG+QYTNYEPEGWKCKCGPSFYSP
Subjt:  VGVQYTNYEPEGWKCKCGPSFYSP

A0A6J1IUG9 Epidermal patterning factor-like protein3.7e-4273.39Show/hide
Query:  MKAAY---WCFILILQLTCWVSAAARTFAPNHALLPHKQQGLISGSLDSKEAVKG--VNEEAFYRGMRKIGSSPPSCEHKCYGCIPCEAIQVPTINRRSH
        MK  Y    CFIL LQL CWVSAA  TF    ALLPHKQQG    + DS +AV+   V E   YRGMRKIGSSPPSCEHKCYGC PCEAIQVPT NRRSH
Subjt:  MKAAY---WCFILILQLTCWVSAAARTFAPNHALLPHKQQGLISGSLDSKEAVKG--VNEEAFYRGMRKIGSSPPSCEHKCYGCIPCEAIQVPTINRRSH

Query:  VGVQYTNYEPEGWKCKCGPSFYSP
        VG+QYTNYEPEGWKCKCGPSFYSP
Subjt:  VGVQYTNYEPEGWKCKCGPSFYSP

SwissProt top hitse value%identityAlignment
C4B8C4 EPIDERMAL PATTERNING FACTOR-like protein 36.2e-1859.02Show/hide
Query:  NEEAFYRGMRKIGSSPPSCEHKCYGCIPCEAIQVPTINRRSHVGVQYTNYEPEGWKCKCGP
        N+E   +  R+IGS PPSCE KCYGC PCEAIQ PTI+   H+   Y NY+PEGW+C C P
Subjt:  NEEAFYRGMRKIGSSPPSCEHKCYGCIPCEAIQVPTINRRSHVGVQYTNYEPEGWKCKCGP

Q1PEY6 EPIDERMAL PATTERNING FACTOR-like protein 63.4e-0842.42Show/hide
Query:  EEAFYRGMRKIGSSPPSCEHKCYGCIPCEAIQVPTINRRSHVGVQYT-NYEPEGWKCKCGPSFYSP
        E    R +R +GSSPP C  KC  C PC+ + VP        G   T  Y PE W+CKCG   Y P
Subjt:  EEAFYRGMRKIGSSPPSCEHKCYGCIPCEAIQVPTINRRSHVGVQYT-NYEPEGWKCKCGPSFYSP

Q2V3I3 EPIDERMAL PATTERNING FACTOR-like protein 42.4e-0642.59Show/hide
Query:  GSSPPSCEHKCYGCIPCEAIQVPTINRRSHVGVQYTNYEPEGWKCKCGPSFYSP
        GSSPP+C  KC  C PC+ + VP     S        Y PE W+CKCG   + P
Subjt:  GSSPPSCEHKCYGCIPCEAIQVPTINRRSHVGVQYTNYEPEGWKCKCGPSFYSP

Q9LFT5 EPIDERMAL PATTERNING FACTOR-like protein 13.3e-1142.11Show/hide
Query:  KIGSSPPSCEHKCYGCIPCEAIQVPTINRRSH--------------------VGVQYTNYEPEGWKCKCGPSFYSP
        ++GS+PPSC ++C  C PC AIQVPT+  RS                     V  QY+NY+P GWKC C   FY+P
Subjt:  KIGSSPPSCEHKCYGCIPCEAIQVPTINRRSH--------------------VGVQYTNYEPEGWKCKCGPSFYSP

Q9LUH9 EPIDERMAL PATTERNING FACTOR-like protein 51.2e-0540.74Show/hide
Query:  GSSPPSCEHKCYGCIPCEAIQVPTINRRSHVGVQYTNYEPEGWKCKCGPSFYSP
        GS PP C  KC  C PC+A+ VP         +    Y PE W+CKCG   + P
Subjt:  GSSPPSCEHKCYGCIPCEAIQVPTINRRSHVGVQYTNYEPEGWKCKCGPSFYSP

Arabidopsis top hitse value%identityAlignment
AT2G30370.1 allergen-related2.4e-0942.42Show/hide
Query:  EEAFYRGMRKIGSSPPSCEHKCYGCIPCEAIQVPTINRRSHVGVQYT-NYEPEGWKCKCGPSFYSP
        E    R +R +GSSPP C  KC  C PC+ + VP        G   T  Y PE W+CKCG   Y P
Subjt:  EEAFYRGMRKIGSSPPSCEHKCYGCIPCEAIQVPTINRRSHVGVQYT-NYEPEGWKCKCGPSFYSP

AT2G30370.2 allergen-related2.4e-0942.42Show/hide
Query:  EEAFYRGMRKIGSSPPSCEHKCYGCIPCEAIQVPTINRRSHVGVQYT-NYEPEGWKCKCGPSFYSP
        E    R +R +GSSPP C  KC  C PC+ + VP        G   T  Y PE W+CKCG   Y P
Subjt:  EEAFYRGMRKIGSSPPSCEHKCYGCIPCEAIQVPTINRRSHVGVQYT-NYEPEGWKCKCGPSFYSP

AT3G13898.1 unknown protein4.4e-1959.02Show/hide
Query:  NEEAFYRGMRKIGSSPPSCEHKCYGCIPCEAIQVPTINRRSHVGVQYTNYEPEGWKCKCGP
        N+E   +  R+IGS PPSCE KCYGC PCEAIQ PTI+   H+   Y NY+PEGW+C C P
Subjt:  NEEAFYRGMRKIGSSPPSCEHKCYGCIPCEAIQVPTINRRSHVGVQYTNYEPEGWKCKCGP

AT4G14723.1 BEST Arabidopsis thaliana protein match is: allergen-related (TAIR:AT3G22820.1)1.7e-0742.59Show/hide
Query:  GSSPPSCEHKCYGCIPCEAIQVPTINRRSHVGVQYTNYEPEGWKCKCGPSFYSP
        GSSPP+C  KC  C PC+ + VP     S        Y PE W+CKCG   + P
Subjt:  GSSPPSCEHKCYGCIPCEAIQVPTINRRSHVGVQYTNYEPEGWKCKCGPSFYSP

AT5G10310.1 unknown protein2.3e-1242.11Show/hide
Query:  KIGSSPPSCEHKCYGCIPCEAIQVPTINRRSH--------------------VGVQYTNYEPEGWKCKCGPSFYSP
        ++GS+PPSC ++C  C PC AIQVPT+  RS                     V  QY+NY+P GWKC C   FY+P
Subjt:  KIGSSPPSCEHKCYGCIPCEAIQVPTINRRSH--------------------VGVQYTNYEPEGWKCKCGPSFYSP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAAGCAGCATACTGGTGTTTTATATTGATTCTGCAATTAACCTGTTGGGTTTCTGCTGCAGCCAGAACTTTTGCTCCAAATCATGCTCTCCTTCCTCATAAACAACA
AGGTCTTATCTCAGGCTCTTTGGATTCAAAAGAGGCTGTTAAAGGTGTAAATGAAGAAGCATTCTATAGAGGGATGAGGAAAATAGGGTCAAGTCCGCCAAGCTGTGAGC
ACAAATGCTATGGATGCATTCCATGTGAAGCCATTCAAGTGCCTACCATCAACAGGCGCAGCCATGTGGGGGTCCAATACACTAACTATGAACCTGAGGGATGGAAATGC
AAGTGTGGCCCTTCCTTTTACAGCCCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGAAAGCAGCATACTGGTGTTTTATATTGATTCTGCAATTAACCTGTTGGGTTTCTGCTGCAGCCAGAACTTTTGCTCCAAATCATGCTCTCCTTCCTCATAAACAACA
AGGTCTTATCTCAGGCTCTTTGGATTCAAAAGAGGCTGTTAAAGGTGTAAATGAAGAAGCATTCTATAGAGGGATGAGGAAAATAGGGTCAAGTCCGCCAAGCTGTGAGC
ACAAATGCTATGGATGCATTCCATGTGAAGCCATTCAAGTGCCTACCATCAACAGGCGCAGCCATGTGGGGGTCCAATACACTAACTATGAACCTGAGGGATGGAAATGC
AAGTGTGGCCCTTCCTTTTACAGCCCTTGA
Protein sequenceShow/hide protein sequence
MKAAYWCFILILQLTCWVSAAARTFAPNHALLPHKQQGLISGSLDSKEAVKGVNEEAFYRGMRKIGSSPPSCEHKCYGCIPCEAIQVPTINRRSHVGVQYTNYEPEGWKC
KCGPSFYSP