; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

HG10002364 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10002364
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionRibosomal protein
Genome locationChr11:6052937..6055436
RNA-Seq ExpressionHG10002364
SyntenyHG10002364
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0005840 - ribosome (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR000271 - Ribosomal protein L34


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6581832.1 hypothetical protein SDJN03_21834, partial [Cucurbita argyrosperma subsp. sororia]2.3e-3685.87Show/hide
Query:  MASKLLIRTGNSLINGLRLSSTHQKNRIWCNQALSHGHGVEVTPMLFPSVSKQETAHHLQQNDTESLRKLESEGIFFPFGLPSLRFFLPDAS
        MASKLLIRTGNSL+N LRLSSTHQ N IW +Q+LS GHGV+VTPMLFPSVSK +TAHHLQQNDTESLRKLESEGIFFPFGLPSLRFFLPD +
Subjt:  MASKLLIRTGNSLINGLRLSSTHQKNRIWCNQALSHGHGVEVTPMLFPSVSKQETAHHLQQNDTESLRKLESEGIFFPFGLPSLRFFLPDAS
KAG7018271.1 hypothetical protein SDJN02_20139, partial [Cucurbita argyrosperma subsp. argyrosperma]3.0e-3687.78Show/hide
Query:  MASKLLIRTGNSLINGLRLSSTHQKNRIWCNQALSHGHGVEVTPMLFPSVSKQETAHHLQQNDTESLRKLESEGIFFPFGLPSLRFFLPD
        MASKLLIRTGNSL+N LRLSSTHQ N IW +Q+LS GHGV+VTPMLFPSVSK +TAHHLQQNDTESLRKLESEGIFFPFGLPSLRFFLPD
Subjt:  MASKLLIRTGNSLINGLRLSSTHQKNRIWCNQALSHGHGVEVTPMLFPSVSKQETAHHLQQNDTESLRKLESEGIFFPFGLPSLRFFLPD
XP_022955351.1 uncharacterized protein LOC111457406 isoform X1 [Cucurbita moschata]3.0e-3687.78Show/hide
Query:  MASKLLIRTGNSLINGLRLSSTHQKNRIWCNQALSHGHGVEVTPMLFPSVSKQETAHHLQQNDTESLRKLESEGIFFPFGLPSLRFFLPD
        MASKLLIRTGNSL+N LRLSSTHQ N IW +Q+LS GHGV+VTPMLFPSVSK +TAHHLQQNDTESLRKLESEGIFFPFGLPSLRFFLPD
Subjt:  MASKLLIRTGNSLINGLRLSSTHQKNRIWCNQALSHGHGVEVTPMLFPSVSKQETAHHLQQNDTESLRKLESEGIFFPFGLPSLRFFLPD
XP_022955352.1 uncharacterized protein LOC111457406 isoform X2 [Cucurbita moschata]3.0e-3687.78Show/hide
Query:  MASKLLIRTGNSLINGLRLSSTHQKNRIWCNQALSHGHGVEVTPMLFPSVSKQETAHHLQQNDTESLRKLESEGIFFPFGLPSLRFFLPD
        MASKLLIRTGNSL+N LRLSSTHQ N IW +Q+LS GHGV+VTPMLFPSVSK +TAHHLQQNDTESLRKLESEGIFFPFGLPSLRFFLPD
Subjt:  MASKLLIRTGNSLINGLRLSSTHQKNRIWCNQALSHGHGVEVTPMLFPSVSKQETAHHLQQNDTESLRKLESEGIFFPFGLPSLRFFLPD
XP_038904887.1 uncharacterized protein LOC120091114 isoform X1 [Benincasa hispida]3.0e-3690Show/hide
Query:  MASKLLIRTGNSLINGLRLSSTHQKNRIWCNQALSHGHGVEVTPMLFPSVSKQETAHHLQQNDTESLRKLESEGIFFPFGLPSLRFFLPD
        MASKLLIRTGNSLIN LRLSSTHQ +RI  NQALS+GHGVEVTPMLFPSVSK +TAHHLQQNDTESLRKLE EGIFFPFGLPSLRFFLPD
Subjt:  MASKLLIRTGNSLINGLRLSSTHQKNRIWCNQALSHGHGVEVTPMLFPSVSKQETAHHLQQNDTESLRKLESEGIFFPFGLPSLRFFLPD
TrEMBL top hitse value%identityAlignment
A0A0A0LIB6 Uncharacterized protein9.3e-3686.67Show/hide
Query:  MASKLLIRTGNSLINGLRLSSTHQKNRIWCNQALSHGHGVEVTPMLFPSVSKQETAHHLQQNDTESLRKLESEGIFFPFGLPSLRFFLPD
        MASKLLIRTG+SL+N LRLSS HQ NRIW +QALSHGHGVEVTPMLFPSVSK +TAH LQQNDTESLR+L+SEGIFFPFGLPSLRFFLPD
Subjt:  MASKLLIRTGNSLINGLRLSSTHQKNRIWCNQALSHGHGVEVTPMLFPSVSKQETAHHLQQNDTESLRKLESEGIFFPFGLPSLRFFLPD
A0A6J1GTJ1 uncharacterized protein LOC111457406 isoform X11.4e-3687.78Show/hide
Query:  MASKLLIRTGNSLINGLRLSSTHQKNRIWCNQALSHGHGVEVTPMLFPSVSKQETAHHLQQNDTESLRKLESEGIFFPFGLPSLRFFLPD
        MASKLLIRTGNSL+N LRLSSTHQ N IW +Q+LS GHGV+VTPMLFPSVSK +TAHHLQQNDTESLRKLESEGIFFPFGLPSLRFFLPD
Subjt:  MASKLLIRTGNSLINGLRLSSTHQKNRIWCNQALSHGHGVEVTPMLFPSVSKQETAHHLQQNDTESLRKLESEGIFFPFGLPSLRFFLPD
A0A6J1GTQ0 uncharacterized protein LOC111457406 isoform X21.4e-3687.78Show/hide
Query:  MASKLLIRTGNSLINGLRLSSTHQKNRIWCNQALSHGHGVEVTPMLFPSVSKQETAHHLQQNDTESLRKLESEGIFFPFGLPSLRFFLPD
        MASKLLIRTGNSL+N LRLSSTHQ N IW +Q+LS GHGV+VTPMLFPSVSK +TAHHLQQNDTESLRKLESEGIFFPFGLPSLRFFLPD
Subjt:  MASKLLIRTGNSLINGLRLSSTHQKNRIWCNQALSHGHGVEVTPMLFPSVSKQETAHHLQQNDTESLRKLESEGIFFPFGLPSLRFFLPD
A0A6J1IS44 uncharacterized protein LOC111480019 isoform X12.7e-3586.67Show/hide
Query:  MASKLLIRTGNSLINGLRLSSTHQKNRIWCNQALSHGHGVEVTPMLFPSVSKQETAHHLQQNDTESLRKLESEGIFFPFGLPSLRFFLPD
        MASKLLIRTGNSL+N LRLSST Q N IW +Q+LS GHGV+VTPMLFPSVSK +TAHHLQQNDTESLRKLESEGIFFPFGLPSLRFFLPD
Subjt:  MASKLLIRTGNSLINGLRLSSTHQKNRIWCNQALSHGHGVEVTPMLFPSVSKQETAHHLQQNDTESLRKLESEGIFFPFGLPSLRFFLPD
A0A6J1IXD9 uncharacterized protein LOC111480019 isoform X22.7e-3586.67Show/hide
Query:  MASKLLIRTGNSLINGLRLSSTHQKNRIWCNQALSHGHGVEVTPMLFPSVSKQETAHHLQQNDTESLRKLESEGIFFPFGLPSLRFFLPD
        MASKLLIRTGNSL+N LRLSST Q N IW +Q+LS GHGV+VTPMLFPSVSK +TAHHLQQNDTESLRKLESEGIFFPFGLPSLRFFLPD
Subjt:  MASKLLIRTGNSLINGLRLSSTHQKNRIWCNQALSHGHGVEVTPMLFPSVSKQETAHHLQQNDTESLRKLESEGIFFPFGLPSLRFFLPD
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G13882.1 Ribosomal protein L341.0e-1037.76Show/hide
Query:  MASKLLIRTGNSLINGLRLSSTHQ--KNRIWCNQALSHGHGVEVTPMLFPSVSKQETAHHLQQNDTESLRKLESEGIFFPFGLPSLRFFLPDASILAE
        MA+K LIR+G SL+N      T    +N +  +       G E+ P  FPS+S  +++   + NDT SL++L   G  +P GLPSL FFLP+    +E
Subjt:  MASKLLIRTGNSLINGLRLSSTHQ--KNRIWCNQALSHGHGVEVTPMLFPSVSKQETAHHLQQNDTESLRKLESEGIFFPFGLPSLRFFLPDASILAE
AT3G13882.2 Ribosomal protein L341.1e-0746.15Show/hide
Query:  GVEVTPMLFPSVSKQETAHHLQQNDTESLRKLESEGIFFPFGLPSLRFFLPD
        G E+ P  FPS+S  +++   + NDT SL++L   G  +P GLPSL FFLP+
Subjt:  GVEVTPMLFPSVSKQETAHHLQQNDTESLRKLESEGIFFPFGLPSLRFFLPD

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGTCCAAACTTCTGATTCGAACGGGAAATTCTTTGATCAATGGATTGAGATTAAGTTCAACGCATCAGAAAAACAGGATTTGGTGTAACCAAGCTCTGTCCCATGG
CCATGGCGTTGAAGTCACTCCCATGCTTTTTCCTTCAGTCTCTAAGCAGGAGACTGCTCATCATTTGCAGCAGAATGATACCGAATCGTTGAGGAAGCTTGAATCGGAAG
GCATTTTCTTTCCTTTTGGGCTTCCGTCTCTCCGGTTCTTCTTGCCCGATGCATCGATCTTAGCCGAGCACACCTCTGAAAACGCGGGGGAAAACCAATCAAAGAGGCAA
ACGGGAAGGAAGGAAAGAGGAATTGTTGGCGAGGACAGAGTCGAAAAGCAACAACGCGAGAGAAGGGAGAACCTACCGACGAACCAATTGTCGAAGAGGCAAGGTAGCGT
GCAGACGAAGGAACTTGGAGGAAGAACTATTTGGTGGTCAAATGGTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCGTCCAAACTTCTGATTCGAACGGGAAATTCTTTGATCAATGGATTGAGATTAAGTTCAACGCATCAGAAAAACAGGATTTGGTGTAACCAAGCTCTGTCCCATGG
CCATGGCGTTGAAGTCACTCCCATGCTTTTTCCTTCAGTCTCTAAGCAGGAGACTGCTCATCATTTGCAGCAGAATGATACCGAATCGTTGAGGAAGCTTGAATCGGAAG
GCATTTTCTTTCCTTTTGGGCTTCCGTCTCTCCGGTTCTTCTTGCCCGATGCATCGATCTTAGCCGAGCACACCTCTGAAAACGCGGGGGAAAACCAATCAAAGAGGCAA
ACGGGAAGGAAGGAAAGAGGAATTGTTGGCGAGGACAGAGTCGAAAAGCAACAACGCGAGAGAAGGGAGAACCTACCGACGAACCAATTGTCGAAGAGGCAAGGTAGCGT
GCAGACGAAGGAACTTGGAGGAAGAACTATTTGGTGGTCAAATGGTTAG
Protein sequenceShow/hide protein sequence
MASKLLIRTGNSLINGLRLSSTHQKNRIWCNQALSHGHGVEVTPMLFPSVSKQETAHHLQQNDTESLRKLESEGIFFPFGLPSLRFFLPDASILAEHTSENAGENQSKRQ
TGRKERGIVGEDRVEKQQRERRENLPTNQLSKRQGSVQTKELGGRTIWWSNG