CuGenDBv2

Gene ID	HG10002366
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	Ankyrin repeat-containing protein
Genome location	Chr11:6072417..6072950
RNA-Seq Expression	HG10002366
Synteny	HG10002366
Gene Ontology terms	GO:0016020 - membrane (cellular component)
InterPro domains	IPR026961 - PGG domain

Homology

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GenBank top hits

e value

%identity

Alignment

KAA0051191.1 ankyrin repeat-containing protein [Cucumis melo var. makuwa]

2.6e-46

63.64

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Query:  KTRNPKKQRVEFARLRT-----GRWKSLKKKLKYKGDWVQEVQGTMMLVATVIATVTFQGGVNPSDGVWQQDTQFTYSSSFNNTTYPSHEYDMAFGLYSD
        KTRN K QR E   L T     GRWK  +KKLKY+GDWVQEVQGTMMLVATVIATVTFQGGVNP  GVWQQDT F YSS  N T     E+   FGLY +
Subjt:  KTRNPKKQRVEFARLRT-----GRWKSLKKKLKYKGDWVQEVQGTMMLVATVIATVTFQGGVNPSDGVWQQDTQFTYSSSFNNTTYPSHEYDMAFGLYSD

Query:  LAGI--NKTIVFPAGTAVLRYQQFELYWAYLWINTISFFTSMSVILMIVGRCPLKNRLCSLLLAMAMCIAVVFLAI
         + +  N +++FPAGT V+R+QQ  L   YLW+NT+SF  SMSVILMIV R PLKNR+CS LL + MCIAVV LAI
Subjt:  LAGI--NKTIVFPAGTAVLRYQQFELYWAYLWINTISFFTSMSVILMIVGRCPLKNRLCSLLLAMAMCIAVVFLAI

TYK03713.1 receptor-interacting serine/threonine-protein kinase 4-like [Cucumis melo var. makuwa]

2.6e-46

63.64

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Query:  KTRNPKKQRVEFARLRT-----GRWKSLKKKLKYKGDWVQEVQGTMMLVATVIATVTFQGGVNPSDGVWQQDTQFTYSSSFNNTTYPSHEYDMAFGLYSD
        KTRN K QR E   L T     GRWK  +KKLKY+GDWVQEVQGTMMLVATVIATVTFQGGVNP  GVWQQDT F YSS  N T     E+   FGLY +
Subjt:  KTRNPKKQRVEFARLRT-----GRWKSLKKKLKYKGDWVQEVQGTMMLVATVIATVTFQGGVNPSDGVWQQDTQFTYSSSFNNTTYPSHEYDMAFGLYSD

Query:  LAGI--NKTIVFPAGTAVLRYQQFELYWAYLWINTISFFTSMSVILMIVGRCPLKNRLCSLLLAMAMCIAVVFLAI
         + +  N +++FPAGT V+R+QQ  L   YLW+NT+SF  SMSVILMIV R PLKNR+CS LL + MCIAVV LAI
Subjt:  LAGI--NKTIVFPAGTAVLRYQQFELYWAYLWINTISFFTSMSVILMIVGRCPLKNRLCSLLLAMAMCIAVVFLAI

XP_008447612.1 PREDICTED: uncharacterized protein LOC103490026 [Cucumis melo]

5.3e-47

63.48

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Query:  KTRNPKKQRVEFARLRT-----GRWKSLKKKLKYKGDWVQEVQGTMMLVATVIATVTFQGGVNPSDGVWQQDTQFTYSSSFNNTTYPSHEYDMAFGLYSD
        KTRN K QR E   L T     GRWK  +KKLKY+GDWVQEVQGTMMLVATVIATVTFQGGVNP  GVWQQDT F YSS  N T     E+   FGLY +
Subjt:  KTRNPKKQRVEFARLRT-----GRWKSLKKKLKYKGDWVQEVQGTMMLVATVIATVTFQGGVNPSDGVWQQDTQFTYSSSFNNTTYPSHEYDMAFGLYSD

Query:  LAGI--NKTIVFPAGTAVLRYQQFELYWAYLWINTISFFTSMSVILMIVGRCPLKNRLCSLLLAMAMCIAVVFLAIEY
         + +  N +++FPAGT V+R+QQ  L   YLW+NT+SF  SMSVILMIV R PLKNR+CS LL + MCIAVV LAI Y
Subjt:  LAGI--NKTIVFPAGTAVLRYQQFELYWAYLWINTISFFTSMSVILMIVGRCPLKNRLCSLLLAMAMCIAVVFLAIEY

XP_011649355.1 uncharacterized protein LOC101212496 [Cucumis sativus]

2.0e-46

63.07

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Query:  KTRNPKKQRVEFARLRT-----GRWKSLKKKLKYKGDWVQEVQGTMMLVATVIATVTFQGGVNPSDGVWQQDTQFTYSSSFNNTTYPSHEYDMAFGLYSD
        K RN K +R E   L T     G WK  KKKLKYKGDWVQEVQGTMMLVATVIATVTFQGGVNP  GVWQQDT F YSS  + T    +E+ M FGLY  
Subjt:  KTRNPKKQRVEFARLRT-----GRWKSLKKKLKYKGDWVQEVQGTMMLVATVIATVTFQGGVNPSDGVWQQDTQFTYSSSFNNTTYPSHEYDMAFGLYSD

Query:  LAGINKTIVFPAGTAVLRYQQFELYWAYLWINTISFFTSMSVILMIVGRCPLKNRLCSLLLAMAMCIAVVFLAIEY
         +  N T++F AGT V++ QQ E+Y  Y+W+NT+SF  SM+VILMIV R PLKNR+CS LLA AMCIAV+ LAI Y
Subjt:  LAGINKTIVFPAGTAVLRYQQFELYWAYLWINTISFFTSMSVILMIVGRCPLKNRLCSLLLAMAMCIAVVFLAIEY

XP_016903124.1 PREDICTED: uncharacterized protein LOC107992044 [Cucumis melo]

4.4e-41

57.63

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Query:  KTRNPKKQRVE----FARLRTGRWKSLKKK-LKYKGDWVQEVQGTMMLVATVIATVTFQGGVNPSDGVWQQDTQFTYSSSFNNTTYPSHEYDMAFGLYSD
        K RN K++R E    + +  TG+WK  +KK LKYKG+W++EVQ TMMLVATVIATVTFQ GVN   GVWQQDT F+Y+S   N+T+         GLYS 
Subjt:  KTRNPKKQRVE----FARLRTGRWKSLKKK-LKYKGDWVQEVQGTMMLVATVIATVTFQGGVNPSDGVWQQDTQFTYSSSFNNTTYPSHEYDMAFGLYSD

Query:  LAGI-NKTIVFPAGTAVLRYQQFELYWAYLWINTISFFTSMSVILMIVGRCPLKNRLCSLLLAMAMCIAVVFLAIEY
        L+   N+T+V PAGT+++ YQQ E YW YLWINT+SF  SMS++LMIV R  L+NR+CS LL +A CIAVV LAI Y
Subjt:  LAGI-NKTIVFPAGTAVLRYQQFELYWAYLWINTISFFTSMSVILMIVGRCPLKNRLCSLLLAMAMCIAVVFLAIEY

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LMQ1 ANK_REP_REGION domain-containing protein

4.9e-46

63.22

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Query:  KTRNPKKQRVEFARLRT-----GRWKSLKKKLKYKGDWVQEVQGTMMLVATVIATVTFQGGVNPSDGVWQQDTQFTYSSSFNNTTYPSHEYDMAFGLYSD
        K RN K +R E   L T     G WK  KKKLKYKGDWVQEVQGTMMLVATVIATVTFQGGVNP  GVWQQDT F YSS  + T    +E+ M FGLY  
Subjt:  KTRNPKKQRVEFARLRT-----GRWKSLKKKLKYKGDWVQEVQGTMMLVATVIATVTFQGGVNPSDGVWQQDTQFTYSSSFNNTTYPSHEYDMAFGLYSD

Query:  LAGINKTIVFPAGTAVLRYQQFELYWAYLWINTISFFTSMSVILMIVGRCPLKNRLCSLLLAMAMCIAVVFLAI
         +  N T++F AGT V++ QQ E+Y  Y+W+NT+SF  SM+VILMIV R PLKNR+CS LLA AMCIAV+ LAI
Subjt:  LAGINKTIVFPAGTAVLRYQQFELYWAYLWINTISFFTSMSVILMIVGRCPLKNRLCSLLLAMAMCIAVVFLAI

A0A1S3BIS1 uncharacterized protein LOC103490026

2.6e-47

63.48

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Query:  KTRNPKKQRVEFARLRT-----GRWKSLKKKLKYKGDWVQEVQGTMMLVATVIATVTFQGGVNPSDGVWQQDTQFTYSSSFNNTTYPSHEYDMAFGLYSD
        KTRN K QR E   L T     GRWK  +KKLKY+GDWVQEVQGTMMLVATVIATVTFQGGVNP  GVWQQDT F YSS  N T     E+   FGLY +
Subjt:  KTRNPKKQRVEFARLRT-----GRWKSLKKKLKYKGDWVQEVQGTMMLVATVIATVTFQGGVNPSDGVWQQDTQFTYSSSFNNTTYPSHEYDMAFGLYSD

Query:  LAGI--NKTIVFPAGTAVLRYQQFELYWAYLWINTISFFTSMSVILMIVGRCPLKNRLCSLLLAMAMCIAVVFLAIEY
         + +  N +++FPAGT V+R+QQ  L   YLW+NT+SF  SMSVILMIV R PLKNR+CS LL + MCIAVV LAI Y
Subjt:  LAGI--NKTIVFPAGTAVLRYQQFELYWAYLWINTISFFTSMSVILMIVGRCPLKNRLCSLLLAMAMCIAVVFLAIEY

A0A1S4E4H3 uncharacterized protein LOC107992044

2.1e-41

57.63

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Query:  KTRNPKKQRVE----FARLRTGRWKSLKKK-LKYKGDWVQEVQGTMMLVATVIATVTFQGGVNPSDGVWQQDTQFTYSSSFNNTTYPSHEYDMAFGLYSD
        K RN K++R E    + +  TG+WK  +KK LKYKG+W++EVQ TMMLVATVIATVTFQ GVN   GVWQQDT F+Y+S   N+T+         GLYS 
Subjt:  KTRNPKKQRVE----FARLRTGRWKSLKKK-LKYKGDWVQEVQGTMMLVATVIATVTFQGGVNPSDGVWQQDTQFTYSSSFNNTTYPSHEYDMAFGLYSD

Query:  LAGI-NKTIVFPAGTAVLRYQQFELYWAYLWINTISFFTSMSVILMIVGRCPLKNRLCSLLLAMAMCIAVVFLAIEY
        L+   N+T+V PAGT+++ YQQ E YW YLWINT+SF  SMS++LMIV R  L+NR+CS LL +A CIAVV LAI Y
Subjt:  LAGI-NKTIVFPAGTAVLRYQQFELYWAYLWINTISFFTSMSVILMIVGRCPLKNRLCSLLLAMAMCIAVVFLAIEY

A0A5A7UCE2 Ankyrin repeat-containing protein

1.3e-46

63.64

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Query:  KTRNPKKQRVEFARLRT-----GRWKSLKKKLKYKGDWVQEVQGTMMLVATVIATVTFQGGVNPSDGVWQQDTQFTYSSSFNNTTYPSHEYDMAFGLYSD
        KTRN K QR E   L T     GRWK  +KKLKY+GDWVQEVQGTMMLVATVIATVTFQGGVNP  GVWQQDT F YSS  N T     E+   FGLY +
Subjt:  KTRNPKKQRVEFARLRT-----GRWKSLKKKLKYKGDWVQEVQGTMMLVATVIATVTFQGGVNPSDGVWQQDTQFTYSSSFNNTTYPSHEYDMAFGLYSD

Query:  LAGI--NKTIVFPAGTAVLRYQQFELYWAYLWINTISFFTSMSVILMIVGRCPLKNRLCSLLLAMAMCIAVVFLAI
         + +  N +++FPAGT V+R+QQ  L   YLW+NT+SF  SMSVILMIV R PLKNR+CS LL + MCIAVV LAI
Subjt:  LAGI--NKTIVFPAGTAVLRYQQFELYWAYLWINTISFFTSMSVILMIVGRCPLKNRLCSLLLAMAMCIAVVFLAI

A0A5D3BVH5 Receptor-interacting serine/threonine-protein kinase 4-like

1.3e-46

63.64

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Query:  KTRNPKKQRVEFARLRT-----GRWKSLKKKLKYKGDWVQEVQGTMMLVATVIATVTFQGGVNPSDGVWQQDTQFTYSSSFNNTTYPSHEYDMAFGLYSD
        KTRN K QR E   L T     GRWK  +KKLKY+GDWVQEVQGTMMLVATVIATVTFQGGVNP  GVWQQDT F YSS  N T     E+   FGLY +
Subjt:  KTRNPKKQRVEFARLRT-----GRWKSLKKKLKYKGDWVQEVQGTMMLVATVIATVTFQGGVNPSDGVWQQDTQFTYSSSFNNTTYPSHEYDMAFGLYSD

Query:  LAGI--NKTIVFPAGTAVLRYQQFELYWAYLWINTISFFTSMSVILMIVGRCPLKNRLCSLLLAMAMCIAVVFLAI
         + +  N +++FPAGT V+R+QQ  L   YLW+NT+SF  SMSVILMIV R PLKNR+CS LL + MCIAVV LAI
Subjt:  LAGI--NKTIVFPAGTAVLRYQQFELYWAYLWINTISFFTSMSVILMIVGRCPLKNRLCSLLLAMAMCIAVVFLAI

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT3G13950.1 unknown protein

4.8e-14

35.33

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Query:  KKLKYKGDWVQEVQGTMMLVATVIATVTFQGGVNPSDGVWQQDTQFTYSSSFNNTTYPSHEYDMAFGLYSDLAGINKTIVFPAGTAVLRYQQFE--LYWA
        K LK +GDW+++ +G +M+ ATVIA ++FQ  VNP  GVWQ D     + SF N T                 G        AGTAVL Y+  +   Y  
Subjt:  KKLKYKGDWVQEVQGTMMLVATVIATVTFQGGVNPSDGVWQQDTQFTYSSSFNNTTYPSHEYDMAFGLYSDLAGINKTIVFPAGTAVLRYQQFE--LYWA

Query:  YLWINTISFFTSMSVILMIVGRCPLKNRLCSLLLAMAMCIAVVFLAIEYF
         +  +T+SF TSMS+IL+++    L+NR+   +L   M +AV+ ++  +F
Subjt:  YLWINTISFFTSMSVILMIVGRCPLKNRLCSLLLAMAMCIAVVFLAIEYF

AT4G13266.1 unknown protein

6.1e-09

27.7

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Query:  LKYKGDWVQEVQGTMMLVATVIATVTFQGGVNPSDGVWQQDTQFTYSSSFNNTTYPSHEYDMAFGLYSDLAGINKTIVFPAGTAVLRYQQFE--LYWAYL
        L ++GDW+++ +G +++ ATVIA ++F   VNP  GVWQ +      SS   TT+ +                 +T     GT++L +   +   Y   +
Subjt:  LKYKGDWVQEVQGTMMLVATVIATVTFQGGVNPSDGVWQQDTQFTYSSSFNNTTYPSHEYDMAFGLYSDLAGINKTIVFPAGTAVLRYQQFE--LYWAYL

Query:  WINTISFFTSMSVILMIVGRCPLKNRLCSLLLAMAMCIAVVFLAIEYF
          N +SF  SM +I +++     +NRL   ++ M M +AV+ ++  +F
Subjt:  WINTISFFTSMSVILMIVGRCPLKNRLCSLLLAMAMCIAVVFLAIEYF

Sequences

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CDS sequence

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ATGAAAAAGACAAGAAACCCCAAAAAACAAAGAGTAGAATTTGCACGGTTGAGAACAGGGCGGTGGAAGTCATTGAAGAAGAAACTAAAATACAAAGGGGATTGGGTTCA
AGAAGTGCAAGGCACAATGATGCTTGTGGCTACCGTGATTGCAACGGTAACTTTTCAAGGGGGAGTGAATCCTTCGGACGGCGTTTGGCAACAAGACACTCAATTCACTT
ATTCTTCGAGTTTCAACAATACTACATATCCTTCTCATGAATACGACATGGCCTTCGGCTTATATAGCGACCTTGCTGGCATTAACAAGACAATTGTATTTCCAGCTGGA
ACTGCAGTACTGAGATACCAACAATTCGAGCTATACTGGGCATACTTATGGATTAACACAATATCGTTCTTCACATCGATGAGCGTGATTTTGATGATCGTCGGCCGATG
TCCGCTAAAAAATAGGCTTTGTAGTTTGCTATTGGCCATGGCCATGTGCATAGCAGTGGTATTCTTAGCAATTGAGTACTTTCGGTATGGTTAA

mRNA sequence

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Protein sequence

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MKKTRNPKKQRVEFARLRTGRWKSLKKKLKYKGDWVQEVQGTMMLVATVIATVTFQGGVNPSDGVWQQDTQFTYSSSFNNTTYPSHEYDMAFGLYSDLAGINKTIVFPAG
TAVLRYQQFELYWAYLWINTISFFTSMSVILMIVGRCPLKNRLCSLLLAMAMCIAVVFLAIEYFRYG

HG10002366 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome