; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

HG10002389 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10002389
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Descriptionleucine-rich repeat extensin-like protein 3
Genome locationChr11:6298901..6299422
RNA-Seq ExpressionHG10002389
SyntenyHG10002389
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008463997.1 PREDICTED: leucine-rich repeat extensin-like protein 3 [Cucumis melo]2.6e-4681.82Show/hide
Query:  MERPLTTLIFVISGFAFSVLSLLVESQTQDGANSTLSPPIVSPPIPSPPPPSPPPPPPLLSPPPPPPPPPP---PPLPSPSPPPFSPPPPFPPPPPPRRS
        MERPLTTLIFVISGFAFSVLSLLVESQT D AN TL     SPP+PSPPPPSP PPPP L PPPPPPPPPP    P PSPSPPPFSP PP PPP   RRS
Subjt:  MERPLTTLIFVISGFAFSVLSLLVESQTQDGANSTLSPPIVSPPIPSPPPPSPPPPPPLLSPPPPPPPPPP---PPLPSPSPPPFSPPPPFPPPPPPRRS

Query:  PPPSHASSIQNRKKSPPVPPNNINTNQGSKQSLNKGKKVGLFFVGIAAVLQICVVGFLVFKRRQLLRVKDRYEGFS
        PPP  ASS++ +KK PPVPP NINTNQ SK+SLNKGKKVGLFFVGIAAVLQICVVGFLVFKRRQLLRVKDRYEGFS
Subjt:  PPPSHASSIQNRKKSPPVPPNNINTNQGSKQSLNKGKKVGLFFVGIAAVLQICVVGFLVFKRRQLLRVKDRYEGFS

XP_011651738.2 LOW QUALITY PROTEIN: basic proline-rich protein [Cucumis sativus]5.2e-4781.82Show/hide
Query:  MERPLTTLIFVISGFAFSVLSLLVESQTQDGANSTLSPPIVSPPIPSPPPPSPPPPPPLLSPPPPPPPPPP---PPLPSPSPPPFSPPPPFPPPPPPRRS
        MERPLTTLIFVI+GFAFSVLSLLVESQT DGAN TL     SPP PS PPPSP PPPP L PPPPPP PPP   PP PSPSPPPFSPPPP PPP   RR+
Subjt:  MERPLTTLIFVISGFAFSVLSLLVESQTQDGANSTLSPPIVSPPIPSPPPPSPPPPPPLLSPPPPPPPPPP---PPLPSPSPPPFSPPPPFPPPPPPRRS

Query:  PPPSHASSIQNRKKSPPVPPNNINTNQGSKQSLNKGKKVGLFFVGIAAVLQICVVGFLVFKRRQLLRVKDRYEGFS
        PPP  ASS++ +KK PPVPP NINTNQGSK+SLNKGKKVGLFFVGIAAVLQICVVGFLVFKRRQLLRVKDRYEGFS
Subjt:  PPPSHASSIQNRKKSPPVPPNNINTNQGSKQSLNKGKKVGLFFVGIAAVLQICVVGFLVFKRRQLLRVKDRYEGFS

XP_022998566.1 leucine-rich repeat extensin-like protein 3 [Cucurbita maxima]1.3e-2964.88Show/hide
Query:  MERPLTTLIFVISGFAFSVLSLLVESQTQDGANSTLSPPIVSPPIPSPPPPSPPPPPPLLSPP------------------PPPPPP---PPPPLPSPSP
        MERPL+T IFVISGFAFS+LSLLVESQ +DGA S+ SPP   PP PSPPPPSPPPPPP LSPP                  PPPP P   PPPP+  P P
Subjt:  MERPLTTLIFVISGFAFSVLSLLVESQTQDGANSTLSPPIVSPPIPSPPPPSPPPPPPLLSPP------------------PPPPPP---PPPPLPSPSP

Query:  P---PFSPPPPFPPPPPP----RRS---PPPSHASSIQNRKKSPPVPPNNINTN-QGSKQSLNKGKKVGLFFVGIAAVLQICVVGFLVFKRRQLLRVKDR
        P   P SPPP FPPPP P     RS   PPP  ASS  N KK P V  NN + N +GSK+SLN GKKVGLFFVGIAAVLQICVVGFLVFKRRQLLR KD+
Subjt:  P---PFSPPPPFPPPPPP----RRS---PPPSHASSIQNRKKSPPVPPNNINTN-QGSKQSLNKGKKVGLFFVGIAAVLQICVVGFLVFKRRQLLRVKDR

Query:  YEGFS
        Y+GFS
Subjt:  YEGFS

XP_023523257.1 leucine-rich repeat extensin-like protein 3 [Cucurbita pepo subsp. pepo]2.2e-2963.78Show/hide
Query:  MERPLTTLIFVISGFAFSVLSLLVESQTQDGANSTLSPPIVSPPIPSPPPPSPPPPPPLLSPPPP--PPPPPPPPLPS--PSPPP--FSPPPPFPPPPPP
        MERP +TLIFVISGFAFS+LSLLVESQ +DGA S+ SPP   PP PSPPPPSPPPPPP   PPPP  PP  PPPP P+  P PPP    PPPP    PPP
Subjt:  MERPLTTLIFVISGFAFSVLSLLVESQTQDGANSTLSPPIVSPPIPSPPPPSPPPPPPLLSPPPP--PPPPPPPPLPS--PSPPP--FSPPPPFPPPPPP

Query:  RRSPPPSHASSIQNRKKSPPVPP-----------------NNINTNQGSKQSLNKGKKVGLFFVGIAAVLQICVVGFLVFKRRQLLRVKDRYEGFS
           PPP    S+Q+R   PP PP                 NN +  +GSK+SLN GKKVGLFFVGIAAVLQICVVGFLVFKRRQLLR KDRY+GFS
Subjt:  RRSPPPSHASSIQNRKKSPPVPP-----------------NNINTNQGSKQSLNKGKKVGLFFVGIAAVLQICVVGFLVFKRRQLLRVKDRYEGFS

XP_038900729.1 proline-rich receptor-like protein kinase PERK2 [Benincasa hispida]2.3e-5085.96Show/hide
Query:  MERPLTTLIFVISGFAFSVLSLLVESQTQDGANSTLSPPIVSPPIPSPPPPSPPPPPPLLSPPPPPPPP----PPPPLPSPSPPPFSPPPPFPPPPPPRR
        MERPLTTLIFVISGFAFSVLSLLVESQTQDGAN TLSPPI SPP PSPPPP PPP  PL  PPPPPPPP    PPPP  SPSPPPFSPPPPFP P PPRR
Subjt:  MERPLTTLIFVISGFAFSVLSLLVESQTQDGANSTLSPPIVSPPIPSPPPPSPPPPPPLLSPPPPPPPP----PPPPLPSPSPPPFSPPPPFPPPPPPRR

Query:  SPPPSHASSIQNRKKSPPVPPNNI-NTNQGSKQSLNKGKKVGLFFVGIAAVLQICVVGFLVFKRRQLLRVKDRYEGFS
         PPP HAS  +N KKSPPVPP NI NTNQGSK+SLNKGKKVGLFFVGIAAVLQICVVGFLVFKRRQLLRVKDRYEGFS
Subjt:  SPPPSHASSIQNRKKSPPVPPNNI-NTNQGSKQSLNKGKKVGLFFVGIAAVLQICVVGFLVFKRRQLLRVKDRYEGFS

TrEMBL top hitse value%identityAlignment
A0A0A0LC75 Uncharacterized protein3.0e-4882.39Show/hide
Query:  MERPLTTLIFVISGFAFSVLSLLVESQTQDGANSTLSPPIVSPPIPSPPPPSPPPPPPLLSPPPPPPPPPP---PPLPSPSPPPFSPPPPFPPPPPPRRS
        MERPLTTLIFVI+GFAFSVLSLLVESQT DGAN TL     SPP PS PPPSP PPPP L PPPPPPPPPP   PP PSPSPPPFSPPPP PPP   RR+
Subjt:  MERPLTTLIFVISGFAFSVLSLLVESQTQDGANSTLSPPIVSPPIPSPPPPSPPPPPPLLSPPPPPPPPPP---PPLPSPSPPPFSPPPPFPPPPPPRRS

Query:  PPPSHASSIQNRKKSPPVPPNNINTNQGSKQSLNKGKKVGLFFVGIAAVLQICVVGFLVFKRRQLLRVKDRYEGFS
        PPP  ASS++ +KK PPVPP NINTNQGSK+SLNKGKKVGLFFVGIAAVLQICVVGFLVFKRRQLLRVKDRYEGFS
Subjt:  PPPSHASSIQNRKKSPPVPPNNINTNQGSKQSLNKGKKVGLFFVGIAAVLQICVVGFLVFKRRQLLRVKDRYEGFS

A0A1S3CKG6 leucine-rich repeat extensin-like protein 31.3e-4681.82Show/hide
Query:  MERPLTTLIFVISGFAFSVLSLLVESQTQDGANSTLSPPIVSPPIPSPPPPSPPPPPPLLSPPPPPPPPPP---PPLPSPSPPPFSPPPPFPPPPPPRRS
        MERPLTTLIFVISGFAFSVLSLLVESQT D AN TL     SPP+PSPPPPSP PPPP L PPPPPPPPPP    P PSPSPPPFSP PP PPP   RRS
Subjt:  MERPLTTLIFVISGFAFSVLSLLVESQTQDGANSTLSPPIVSPPIPSPPPPSPPPPPPLLSPPPPPPPPPP---PPLPSPSPPPFSPPPPFPPPPPPRRS

Query:  PPPSHASSIQNRKKSPPVPPNNINTNQGSKQSLNKGKKVGLFFVGIAAVLQICVVGFLVFKRRQLLRVKDRYEGFS
        PPP  ASS++ +KK PPVPP NINTNQ SK+SLNKGKKVGLFFVGIAAVLQICVVGFLVFKRRQLLRVKDRYEGFS
Subjt:  PPPSHASSIQNRKKSPPVPPNNINTNQGSKQSLNKGKKVGLFFVGIAAVLQICVVGFLVFKRRQLLRVKDRYEGFS

A0A6J1DGD7 proline-rich receptor-like protein kinase PERK93.3e-2362.57Show/hide
Query:  MERPLTTLIFVISGFAFSVLSLLVESQTQDGANSTLSPPIVSPP-IPSPPPPSPPPPPPLLSPPPPPPPPPPPPLPSPSPPPFSPPPPFPPPPPPRR---
        MERPLTT IFVISGFAFS+LSLLVE Q QD  NS ++P   SPP +PSPPP          SP  PPP PP PP PSP  PP  PP P  PPPP RR   
Subjt:  MERPLTTLIFVISGFAFSVLSLLVESQTQDGANSTLSPPIVSPP-IPSPPPPSPPPPPPLLSPPPPPPPPPPPPLPSPSPPPFSPPPPFPPPPPPRR---

Query:  SPPPSHASSIQNRK-KSPPVPPNNINTNQGSKQS-LNKGKKVGLFFVGIAAVLQICVVGFLVFKRRQLLRVKDRYEGFS
        SPPPS ASS +N   +       N   NQ  K+S LNKGK+VGLFFVGIAAVLQ+CVVGFLVFKRRQLLR K++YE FS
Subjt:  SPPPSHASSIQNRK-KSPPVPPNNINTNQGSKQS-LNKGKKVGLFFVGIAAVLQICVVGFLVFKRRQLLRVKDRYEGFS

A0A6J1G9A4 leucine-rich repeat extensin-like protein 33.1e-2968.42Show/hide
Query:  MERPLTTLIFVISGFAFSVLSLLVESQTQDGANSTLSPPIVSPPIPSPPPPSPPPPPPLLSPPPP--PPPPPPPPLPSPS----PPP--FSPPPPFPPPP
        MERP +TLIFVISGFAFS+LSLLVESQ +DGA  + SPP   PP PSPPPPSPPPPPP   PPPP  PP  PPPP PSP+    PPP   SPPPP  PPP
Subjt:  MERPLTTLIFVISGFAFSVLSLLVESQTQDGANSTLSPPIVSPPIPSPPPPSPPPPPPLLSPPPP--PPPPPPPPLPSPS----PPP--FSPPPPFPPPP

Query:  PPRRS--------PPPSHASSIQNRKKSPPVPPNNINTN-QGSKQSLNKGKKVGLFFVGIAAVLQICVVGFLVFKRRQLLRVKDRYEGFS
        P   S        PPP  ASS  N KK P V  NN + N +GSK+SLN GKKVGLFFVGIAAVLQICVVGFLVFKRRQLLR KDRY+GFS
Subjt:  PPRRS--------PPPSHASSIQNRKKSPPVPPNNINTN-QGSKQSLNKGKKVGLFFVGIAAVLQICVVGFLVFKRRQLLRVKDRYEGFS

A0A6J1KAI1 leucine-rich repeat extensin-like protein 36.2e-3064.88Show/hide
Query:  MERPLTTLIFVISGFAFSVLSLLVESQTQDGANSTLSPPIVSPPIPSPPPPSPPPPPPLLSPP------------------PPPPPP---PPPPLPSPSP
        MERPL+T IFVISGFAFS+LSLLVESQ +DGA S+ SPP   PP PSPPPPSPPPPPP LSPP                  PPPP P   PPPP+  P P
Subjt:  MERPLTTLIFVISGFAFSVLSLLVESQTQDGANSTLSPPIVSPPIPSPPPPSPPPPPPLLSPP------------------PPPPPP---PPPPLPSPSP

Query:  P---PFSPPPPFPPPPPP----RRS---PPPSHASSIQNRKKSPPVPPNNINTN-QGSKQSLNKGKKVGLFFVGIAAVLQICVVGFLVFKRRQLLRVKDR
        P   P SPPP FPPPP P     RS   PPP  ASS  N KK P V  NN + N +GSK+SLN GKKVGLFFVGIAAVLQICVVGFLVFKRRQLLR KD+
Subjt:  P---PFSPPPPFPPPPPP----RRS---PPPSHASSIQNRKKSPPVPPNNINTN-QGSKQSLNKGKKVGLFFVGIAAVLQICVVGFLVFKRRQLLRVKDR

Query:  YEGFS
        Y+GFS
Subjt:  YEGFS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G54215.1 proline-rich family protein1.4e-0545.98Show/hide
Query:  IFVISGFAFSVLSLLVESQTQDGANSTLSPPIVSPPIPSPPPPSPPPPPPLLSPPPPPPPPPPPP---------LPSPSPP------PFSPPPPFPPPPP
        +F+++ F      LLV+SQ          PP+      SPPPP PPPPPP   PPPPPPPPPPPP         +P P PP      P S PP  PP PP
Subjt:  IFVISGFAFSVLSLLVESQTQDGANSTLSPPIVSPPIPSPPPPSPPPPPPLLSPPPPPPPPPPPP---------LPSPSPP------PFSPPPPFPPPPP

Query:  PRRSPPPSHASSIQNRKKSPPVPPNNINTNQGSKQSLNKGKKVGLFFVGIAAVLQICVVGFLVFKRRQLLRVKD
        PR  PPP      +N  +  P PP   +  +  +  LNKGK VGL FVG+ A+LQ+ VV FLVFKR+QLL +KD
Subjt:  PRRSPPPSHASSIQNRKKSPPVPPNNINTNQGSKQSLNKGKKVGLFFVGIAAVLQICVVGFLVFKRRQLLRVKD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAACGGCCATTGACCACATTGATCTTCGTGATTTCGGGGTTTGCTTTCAGTGTTTTGTCGCTTCTTGTCGAGTCTCAGACTCAAGATGGAGCCAATTCTACTCTCTC
GCCGCCGATTGTGTCTCCGCCGATACCTTCTCCACCGCCTCCCTCTCCGCCGCCACCACCGCCATTGCTATCGCCACCGCCACCACCCCCGCCTCCGCCTCCGCCTCCGC
TTCCATCGCCATCTCCTCCCCCATTTTCCCCACCCCCTCCATTTCCACCGCCTCCGCCACCTCGCCGTAGTCCGCCGCCCTCTCATGCATCCTCCATACAGAATAGAAAA
AAATCGCCACCAGTGCCTCCGAATAACATTAATACTAATCAAGGGTCGAAGCAAAGTCTCAATAAGGGGAAGAAAGTTGGGTTGTTCTTTGTAGGTATTGCCGCAGTCCT
CCAAATCTGTGTGGTGGGATTTTTGGTATTCAAGAGACGGCAGCTTCTAAGAGTCAAAGACCGATATGAAGGCTTTTCATGA
mRNA sequenceShow/hide mRNA sequence
ATGGAACGGCCATTGACCACATTGATCTTCGTGATTTCGGGGTTTGCTTTCAGTGTTTTGTCGCTTCTTGTCGAGTCTCAGACTCAAGATGGAGCCAATTCTACTCTCTC
GCCGCCGATTGTGTCTCCGCCGATACCTTCTCCACCGCCTCCCTCTCCGCCGCCACCACCGCCATTGCTATCGCCACCGCCACCACCCCCGCCTCCGCCTCCGCCTCCGC
TTCCATCGCCATCTCCTCCCCCATTTTCCCCACCCCCTCCATTTCCACCGCCTCCGCCACCTCGCCGTAGTCCGCCGCCCTCTCATGCATCCTCCATACAGAATAGAAAA
AAATCGCCACCAGTGCCTCCGAATAACATTAATACTAATCAAGGGTCGAAGCAAAGTCTCAATAAGGGGAAGAAAGTTGGGTTGTTCTTTGTAGGTATTGCCGCAGTCCT
CCAAATCTGTGTGGTGGGATTTTTGGTATTCAAGAGACGGCAGCTTCTAAGAGTCAAAGACCGATATGAAGGCTTTTCATGA
Protein sequenceShow/hide protein sequence
MERPLTTLIFVISGFAFSVLSLLVESQTQDGANSTLSPPIVSPPIPSPPPPSPPPPPPLLSPPPPPPPPPPPPLPSPSPPPFSPPPPFPPPPPPRRSPPPSHASSIQNRK
KSPPVPPNNINTNQGSKQSLNKGKKVGLFFVGIAAVLQICVVGFLVFKRRQLLRVKDRYEGFS