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HG10002425 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10002425
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description25.3 kDa vesicle transport protein
Genome locationChr11:6646953..6647204
RNA-Seq ExpressionHG10002425
SyntenyHG10002425
Gene Ontology termsGO:0006888 - endoplasmic reticulum to Golgi vesicle-mediated transport (biological process)
GO:0006890 - retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum (biological process)
GO:0009854 - oxidative photosynthetic carbon pathway (biological process)
GO:0061025 - membrane fusion (biological process)
GO:0005777 - peroxisome (cellular component)
GO:0005789 - endoplasmic reticulum membrane (cellular component)
GO:0005794 - Golgi apparatus (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0003973 - (S)-2-hydroxy-acid oxidase activity (molecular function)
GO:0005484 - SNAP receptor activity (molecular function)
GO:0010181 - FMN binding (molecular function)
InterPro domainsIPR010908 - Longin domain
IPR011012 - Longin-like domain superfamily
IPR044565 - Vesicle-trafficking protein Sec22


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8650885.1 hypothetical protein Csa_000865 [Cucumis sativus]4.9e-3590.36Show/hide
Query:  MVKLTMIARVTDGLPLAEGLDDGRDLKDAEYYKQQAKALFKNLSRGQNEASRMSIETGSYVFQYPCNMQDYFLCNLRLEYQMP
        MVKLTMIARVTDGLPLAEGLDDGRDL+DAEYYKQQAK+LFKNLS GQNE SRMS+ETG+YVFQYPCNMQD F CNLRLEYQMP
Subjt:  MVKLTMIARVTDGLPLAEGLDDGRDLKDAEYYKQQAKALFKNLSRGQNEASRMSIETGSYVFQYPCNMQDYFLCNLRLEYQMP

MBA0779298.1 hypothetical protein [Gossypium trilobum]2.1e-2582.19Show/hide
Query:  MVKLTMIARVTDGLPLAEGLDDGRDLKDAEYYKQQAKALFKNLSRGQNEASRMSIETGSYVFQYPCNMQDYFL
        MVKLTMIARVTDGLPLAEGLDDGRDL DAE YKQQ KALFKNLS+G NEASRMS+ETG YVFQYPC +  Y +
Subjt:  MVKLTMIARVTDGLPLAEGLDDGRDLKDAEYYKQQAKALFKNLSRGQNEASRMSIETGSYVFQYPCNMQDYFL

MBA0812213.1 hypothetical protein [Gossypium harknessii]2.1e-2582.19Show/hide
Query:  MVKLTMIARVTDGLPLAEGLDDGRDLKDAEYYKQQAKALFKNLSRGQNEASRMSIETGSYVFQYPCNMQDYFL
        MVKLTMIARVTDGLPLAEGLDDGRDL DAE YKQQ KALFKNLS+G NEASRMS+ETG YVFQYPC +  Y +
Subjt:  MVKLTMIARVTDGLPLAEGLDDGRDLKDAEYYKQQAKALFKNLSRGQNEASRMSIETGSYVFQYPCNMQDYFL

MBA0840405.1 hypothetical protein [Gossypium armourianum]2.1e-2582.19Show/hide
Query:  MVKLTMIARVTDGLPLAEGLDDGRDLKDAEYYKQQAKALFKNLSRGQNEASRMSIETGSYVFQYPCNMQDYFL
        MVKLTMIARVTDGLPLAEGLDDGRDL DAE YKQQ KALFKNLS+G NEASRMS+ETG YVFQYPC +  Y +
Subjt:  MVKLTMIARVTDGLPLAEGLDDGRDLKDAEYYKQQAKALFKNLSRGQNEASRMSIETGSYVFQYPCNMQDYFL

RYQ85624.1 hypothetical protein Ahy_B10g105193 isoform E [Arachis hypogaea]4.6e-2593.85Show/hide
Query:  MVKLTMIARVTDGLPLAEGLDDGRDLKDAEYYKQQAKALFKNLSRGQNEASRMSIETGSYVFQYP
        MVKLTMIARVTDGLPLAEGLDDGRDLKDAE+YKQQ KALFKNLSRG NEASRMSIETG YVFQYP
Subjt:  MVKLTMIARVTDGLPLAEGLDDGRDLKDAEYYKQQAKALFKNLSRGQNEASRMSIETGSYVFQYP

TrEMBL top hitse value%identityAlignment
A0A0D3GDU4 Uncharacterized protein7.6e-2675.31Show/hide
Query:  MVKLTMIARVTDGLPLAEGLDDGRDLKDAEYYKQQAKALFKNLSRGQNEASRMSIETGSYVFQYPCNMQDYFLCNLRLEYQ
        MVKLTMIARVTDGLPLAEGLDDGRD KDA++YKQQAK LFKNLS+GQ+EASRMSIETG Y FQYP  +  YF+  ++L +Q
Subjt:  MVKLTMIARVTDGLPLAEGLDDGRDLKDAEYYKQQAKALFKNLSRGQNEASRMSIETGSYVFQYPCNMQDYFLCNLRLEYQ

A0A444X7K5 Uncharacterized protein2.2e-2593.85Show/hide
Query:  MVKLTMIARVTDGLPLAEGLDDGRDLKDAEYYKQQAKALFKNLSRGQNEASRMSIETGSYVFQYP
        MVKLTMIARVTDGLPLAEGLDDGRDLKDAE+YKQQ KALFKNLSRG NEASRMSIETG YVFQYP
Subjt:  MVKLTMIARVTDGLPLAEGLDDGRDLKDAEYYKQQAKALFKNLSRGQNEASRMSIETGSYVFQYP

A0A7J9F2B2 Uncharacterized protein1.0e-2582.19Show/hide
Query:  MVKLTMIARVTDGLPLAEGLDDGRDLKDAEYYKQQAKALFKNLSRGQNEASRMSIETGSYVFQYPCNMQDYFL
        MVKLTMIARVTDGLPLAEGLDDGRDL DAE YKQQ KALFKNLS+G NEASRMS+ETG YVFQYPC +  Y +
Subjt:  MVKLTMIARVTDGLPLAEGLDDGRDLKDAEYYKQQAKALFKNLSRGQNEASRMSIETGSYVFQYPCNMQDYFL

A0A7J9HR89 Uncharacterized protein1.0e-2582.19Show/hide
Query:  MVKLTMIARVTDGLPLAEGLDDGRDLKDAEYYKQQAKALFKNLSRGQNEASRMSIETGSYVFQYPCNMQDYFL
        MVKLTMIARVTDGLPLAEGLDDGRDL DAE YKQQ KALFKNLS+G NEASRMS+ETG YVFQYPC +  Y +
Subjt:  MVKLTMIARVTDGLPLAEGLDDGRDLKDAEYYKQQAKALFKNLSRGQNEASRMSIETGSYVFQYPCNMQDYFL

A0A7J9K1U8 Uncharacterized protein1.0e-2582.19Show/hide
Query:  MVKLTMIARVTDGLPLAEGLDDGRDLKDAEYYKQQAKALFKNLSRGQNEASRMSIETGSYVFQYPCNMQDYFL
        MVKLTMIARVTDGLPLAEGLDDGRDL DAE YKQQ KALFKNLS+G NEASRMS+ETG YVFQYPC +  Y +
Subjt:  MVKLTMIARVTDGLPLAEGLDDGRDLKDAEYYKQQAKALFKNLSRGQNEASRMSIETGSYVFQYPCNMQDYFL

SwissProt top hitse value%identityAlignment
O08547 Vesicle-trafficking protein SEC22b1.3e-0644.62Show/hide
Query:  MVKLTMIARVTDGLPLAEGL-DDGRDLKDAEYYKQQAKALFKNLSRGQNEASRMSIETGSYVFQY
        MV LTMIARV DGLPLA  + +D +  +D + Y+ QAK LF+ L+  +   +R ++E G+  F Y
Subjt:  MVKLTMIARVTDGLPLAEGL-DDGRDLKDAEYYKQQAKALFKNLSRGQNEASRMSIETGSYVFQY

O75396 Vesicle-trafficking protein SEC22b1.3e-0644.62Show/hide
Query:  MVKLTMIARVTDGLPLAEGL-DDGRDLKDAEYYKQQAKALFKNLSRGQNEASRMSIETGSYVFQY
        MV LTMIARV DGLPLA  + +D +  +D + Y+ QAK LF+ L+  +   +R ++E G+  F Y
Subjt:  MVKLTMIARVTDGLPLAEGL-DDGRDLKDAEYYKQQAKALFKNLSRGQNEASRMSIETGSYVFQY

Q5RAI9 Vesicle-trafficking protein SEC22b1.3e-0644.62Show/hide
Query:  MVKLTMIARVTDGLPLAEGL-DDGRDLKDAEYYKQQAKALFKNLSRGQNEASRMSIETGSYVFQY
        MV LTMIARV DGLPLA  + +D +  +D + Y+ QAK LF+ L+  +   +R ++E G+  F Y
Subjt:  MVKLTMIARVTDGLPLAEGL-DDGRDLKDAEYYKQQAKALFKNLSRGQNEASRMSIETGSYVFQY

Q5ZJW4 Vesicle-trafficking protein SEC22b1.3e-0644.62Show/hide
Query:  MVKLTMIARVTDGLPLAEGL-DDGRDLKDAEYYKQQAKALFKNLSRGQNEASRMSIETGSYVFQY
        MV LTMIARV DGLPLA  + +D +  +D + Y+ QAK LF+ L+  +   +R ++E G+  F Y
Subjt:  MVKLTMIARVTDGLPLAEGL-DDGRDLKDAEYYKQQAKALFKNLSRGQNEASRMSIETGSYVFQY

Q94AU2 25.3 kDa vesicle transport protein3.1e-2482.81Show/hide
Query:  MVKLTMIARVTDGLPLAEGLDDGRDLKDAEYYKQQAKALFKNLSRGQNEASRMSIETGSYVFQY
        MVK+T+IARVTDGLPLAEGLDDGRDL D++ YKQQ KALFKNLSRGQN+ASRMS+ETG YVF Y
Subjt:  MVKLTMIARVTDGLPLAEGLDDGRDLKDAEYYKQQAKALFKNLSRGQNEASRMSIETGSYVFQY

Arabidopsis top hitse value%identityAlignment
AT1G11890.1 Synaptobrevin family protein2.2e-2582.81Show/hide
Query:  MVKLTMIARVTDGLPLAEGLDDGRDLKDAEYYKQQAKALFKNLSRGQNEASRMSIETGSYVFQY
        MVK+T+IARVTDGLPLAEGLDDGRDL D++ YKQQ KALFKNLSRGQN+ASRMS+ETG YVF Y
Subjt:  MVKLTMIARVTDGLPLAEGLDDGRDLKDAEYYKQQAKALFKNLSRGQNEASRMSIETGSYVFQY


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTGAAGCTGACAATGATTGCCCGTGTTACTGACGGTCTTCCTCTTGCTGAGGGACTAGATGATGGTCGTGATTTGAAAGATGCTGAATATTACAAGCAGCAAGCCAA
AGCGTTGTTTAAGAACTTATCAAGAGGACAGAATGAGGCTTCGAGGATGTCTATTGAAACCGGCTCTTATGTCTTTCAGTATCCTTGCAACATGCAAGATTATTTTCTGT
GCAATCTTAGATTAGAGTATCAAATGCCCTAG
mRNA sequenceShow/hide mRNA sequence
ATGGTGAAGCTGACAATGATTGCCCGTGTTACTGACGGTCTTCCTCTTGCTGAGGGACTAGATGATGGTCGTGATTTGAAAGATGCTGAATATTACAAGCAGCAAGCCAA
AGCGTTGTTTAAGAACTTATCAAGAGGACAGAATGAGGCTTCGAGGATGTCTATTGAAACCGGCTCTTATGTCTTTCAGTATCCTTGCAACATGCAAGATTATTTTCTGT
GCAATCTTAGATTAGAGTATCAAATGCCCTAG
Protein sequenceShow/hide protein sequence
MVKLTMIARVTDGLPLAEGLDDGRDLKDAEYYKQQAKALFKNLSRGQNEASRMSIETGSYVFQYPCNMQDYFLCNLRLEYQMP