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HG10002446 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10002446
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionTransmembrane protein
Genome locationChr11:6834204..6834688
RNA-Seq ExpressionHG10002446
SyntenyHG10002446
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6571254.1 hypothetical protein SDJN03_30169, partial [Cucurbita argyrosperma subsp. sororia]1.7e-2759.26Show/hide
Query:  VFVLVLWMLIIIVGVGKAHEEAPNN---IFSETVKSAEAVSPN-PNSYWEEVRKLVNKAYTYLFPPKIEGLGLGFSFRPGKPVEDGGVSVNGNGNVKEAV
        V VLVLWM +++VGVGKA EEA NN   I    + ++ A SP+ PNSYWEEVRK+VN+A T LFPPKI+       FRPG PVEDG   VNGN N+KE++
Subjt:  VFVLVLWMLIIIVGVGKAHEEAPNN---IFSETVKSAEAVSPN-PNSYWEEVRKLVNKAYTYLFPPKIEGLGLGFSFRPGKPVEDGGVSVNGNGNVKEAV

Query:  TKSFQKTKEMVEDSAKAAGETLQQQQQQPPPHSEL
        TKSF  TK+MVEDSA AA +TL     QP P SEL
Subjt:  TKSFQKTKEMVEDSAKAAGETLQQQQQQPPPHSEL

KAG6571257.1 hypothetical protein SDJN03_30172, partial [Cucurbita argyrosperma subsp. sororia]3.7e-2759.26Show/hide
Query:  VFVLVLWMLIIIVGVGKAHEEAPNNI---FSETVKSAEAVSPN-PNSYWEEVRKLVNKAYTYLFPPKIEGLGLGFSFRPGKPVEDGGVSVNGNGNVKEAV
        V VLVLWM +++VGVGKA EEA NNI       + ++ A SP+ PNSYWEEVRK+VN+A T LFPPKI+       FR G PVEDG   VNGN N+KE++
Subjt:  VFVLVLWMLIIIVGVGKAHEEAPNNI---FSETVKSAEAVSPN-PNSYWEEVRKLVNKAYTYLFPPKIEGLGLGFSFRPGKPVEDGGVSVNGNGNVKEAV

Query:  TKSFQKTKEMVEDSAKAAGETLQQQQQQPPPHSEL
        TKSF  TK+MVEDSAKAA +TL     QP P SEL
Subjt:  TKSFQKTKEMVEDSAKAAGETLQQQQQQPPPHSEL

XP_008460283.1 PREDICTED: uncharacterized protein LOC103499155 [Cucumis melo]1.9e-3161.27Show/hide
Query:  MEKKEKIGVFV-LVLWMLIIIVGVGKAHEEAPNNIFSETVKSAEAVSPN-PNSYWEEVRKLVNKAYTYLFPPKIEGLGLGFSFRPGKPVE-DGGVSVNGN
        ME+K+K+ V + ++L +L+I+VG+  A++EA NN++SET       +PN PNSYWEEVRK+VNKAY+YLFPPKI+       FRPGK VE D G+SV  +
Subjt:  MEKKEKIGVFV-LVLWMLIIIVGVGKAHEEAPNNIFSETVKSAEAVSPN-PNSYWEEVRKLVNKAYTYLFPPKIEGLGLGFSFRPGKPVE-DGGVSVNGN

Query:  GNVKEAVTKSFQKTKEMVEDSAKAAGETLQQQQQQPPPHSEL
        GNVKEAVTKSF+KTKEMVEDSAKAA +TL    Q+PPPHSEL
Subjt:  GNVKEAVTKSFQKTKEMVEDSAKAAGETLQQQQQQPPPHSEL

XP_022948557.1 uncharacterized protein LOC111452199 [Cucurbita moschata]4.3e-2860.32Show/hide
Query:  LIIIVGVGKAHEEAPNNI---FSETVKSAEAVSPNPNSYWEEVRKLVNKAYTYLFPPKIEGLGLGFSFRPGKPVEDGGVSVNGNGNVKEAVTKSFQKTKE
        ++I+VGVGKA EEAPNNI       + ++ A SP PNSYWEEVRK+VN+A T LFPPKI+       FRPGKPVEDG   VNGN N+KE++TKSF  TK+
Subjt:  LIIIVGVGKAHEEAPNNI---FSETVKSAEAVSPNPNSYWEEVRKLVNKAYTYLFPPKIEGLGLGFSFRPGKPVEDGGVSVNGNGNVKEAVTKSFQKTKE

Query:  MVEDSAKAAGETLQQQQQQPPPHSEL
        MVEDSAKAA +TL     +P P SEL
Subjt:  MVEDSAKAAGETLQQQQQQPPPHSEL

XP_031737573.1 uncharacterized protein LOC101222094 [Cucumis sativus]6.9e-3465.49Show/hide
Query:  MEKKEKIGVFVLVLWMLIIIVGVGKAHEEAPNNIFSETVKSAEAVSPN-PNSYWEEVRKLVNKAYTYLFPPKIEGLGLGFSFRPGKPVE-DGGVSV-NGN
        MEKK+   V  ++L +L+++VG+ KA+EEA NNI+SET       +PN PNSYWEEVRK+VNKAYTYLFPPKI+       FRPGK VE D GVSV NGN
Subjt:  MEKKEKIGVFVLVLWMLIIIVGVGKAHEEAPNNIFSETVKSAEAVSPN-PNSYWEEVRKLVNKAYTYLFPPKIEGLGLGFSFRPGKPVE-DGGVSV-NGN

Query:  GNVKEAVTKSFQKTKEMVEDSAKAAGETLQQQQQQPPPHSEL
         NVKEAVTKSF+KTKEMVEDSAKAA +TL    Q+PPPHSEL
Subjt:  GNVKEAVTKSFQKTKEMVEDSAKAAGETLQQQQQQPPPHSEL

TrEMBL top hitse value%identityAlignment
A0A0A0L904 Uncharacterized protein3.4e-3465.49Show/hide
Query:  MEKKEKIGVFVLVLWMLIIIVGVGKAHEEAPNNIFSETVKSAEAVSPN-PNSYWEEVRKLVNKAYTYLFPPKIEGLGLGFSFRPGKPVE-DGGVSV-NGN
        MEKK+   V  ++L +L+++VG+ KA+EEA NNI+SET       +PN PNSYWEEVRK+VNKAYTYLFPPKI+       FRPGK VE D GVSV NGN
Subjt:  MEKKEKIGVFVLVLWMLIIIVGVGKAHEEAPNNIFSETVKSAEAVSPN-PNSYWEEVRKLVNKAYTYLFPPKIEGLGLGFSFRPGKPVE-DGGVSV-NGN

Query:  GNVKEAVTKSFQKTKEMVEDSAKAAGETLQQQQQQPPPHSEL
         NVKEAVTKSF+KTKEMVEDSAKAA +TL    Q+PPPHSEL
Subjt:  GNVKEAVTKSFQKTKEMVEDSAKAAGETLQQQQQQPPPHSEL

A0A1S3CDE0 uncharacterized protein LOC1034991559.1e-3261.27Show/hide
Query:  MEKKEKIGVFV-LVLWMLIIIVGVGKAHEEAPNNIFSETVKSAEAVSPN-PNSYWEEVRKLVNKAYTYLFPPKIEGLGLGFSFRPGKPVE-DGGVSVNGN
        ME+K+K+ V + ++L +L+I+VG+  A++EA NN++SET       +PN PNSYWEEVRK+VNKAY+YLFPPKI+       FRPGK VE D G+SV  +
Subjt:  MEKKEKIGVFV-LVLWMLIIIVGVGKAHEEAPNNIFSETVKSAEAVSPN-PNSYWEEVRKLVNKAYTYLFPPKIEGLGLGFSFRPGKPVE-DGGVSVNGN

Query:  GNVKEAVTKSFQKTKEMVEDSAKAAGETLQQQQQQPPPHSEL
        GNVKEAVTKSF+KTKEMVEDSAKAA +TL    Q+PPPHSEL
Subjt:  GNVKEAVTKSFQKTKEMVEDSAKAAGETLQQQQQQPPPHSEL

A0A5A7VE77 Putative transmembrane protein9.1e-3261.27Show/hide
Query:  MEKKEKIGVFV-LVLWMLIIIVGVGKAHEEAPNNIFSETVKSAEAVSPN-PNSYWEEVRKLVNKAYTYLFPPKIEGLGLGFSFRPGKPVE-DGGVSVNGN
        ME+K+K+ V + ++L +L+I+VG+  A++EA NN++SET       +PN PNSYWEEVRK+VNKAY+YLFPPKI+       FRPGK VE D G+SV  +
Subjt:  MEKKEKIGVFV-LVLWMLIIIVGVGKAHEEAPNNIFSETVKSAEAVSPN-PNSYWEEVRKLVNKAYTYLFPPKIEGLGLGFSFRPGKPVE-DGGVSVNGN

Query:  GNVKEAVTKSFQKTKEMVEDSAKAAGETLQQQQQQPPPHSEL
        GNVKEAVTKSF+KTKEMVEDSAKAA +TL    Q+PPPHSEL
Subjt:  GNVKEAVTKSFQKTKEMVEDSAKAAGETLQQQQQQPPPHSEL

A0A6J1D2A4 uncharacterized protein LOC1110169332.0e-0745.45Show/hide
Query:  TVKSAEAVSPNPNSYWEEVRK-LVNKAYTYLFPPKIEGLGLGFSFRPGKPVEDGGVSVNGNGNVKEAVTKSFQKTKEMVEDSAKAAGE
        TV SA      P+ YW+ +R  +++    YLFPPKI+       FRPGK  +D     +GN NVKEA+TKSF + K++V+DSAKAA +
Subjt:  TVKSAEAVSPNPNSYWEEVRK-LVNKAYTYLFPPKIEGLGLGFSFRPGKPVEDGGVSVNGNGNVKEAVTKSFQKTKEMVEDSAKAAGE

A0A6J1G9K3 uncharacterized protein LOC1114521992.1e-2860.32Show/hide
Query:  LIIIVGVGKAHEEAPNNI---FSETVKSAEAVSPNPNSYWEEVRKLVNKAYTYLFPPKIEGLGLGFSFRPGKPVEDGGVSVNGNGNVKEAVTKSFQKTKE
        ++I+VGVGKA EEAPNNI       + ++ A SP PNSYWEEVRK+VN+A T LFPPKI+       FRPGKPVEDG   VNGN N+KE++TKSF  TK+
Subjt:  LIIIVGVGKAHEEAPNNI---FSETVKSAEAVSPNPNSYWEEVRKLVNKAYTYLFPPKIEGLGLGFSFRPGKPVEDGGVSVNGNGNVKEAVTKSFQKTKE

Query:  MVEDSAKAAGETLQQQQQQPPPHSEL
        MVEDSAKAA +TL     +P P SEL
Subjt:  MVEDSAKAAGETLQQQQQQPPPHSEL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGAAGAAGGAGAAGATTGGTGTTTTTGTTTTGGTTTTGTGGATGCTGATTATTATTGTTGGTGTTGGAAAGGCTCATGAGGAAGCACCAAATAACATATTTTCAGA
AACAGTGAAATCAGCAGAAGCAGTTAGCCCTAATCCTAATTCTTACTGGGAAGAAGTTCGAAAGCTGGTCAATAAAGCTTACACGTATCTATTCCCTCCCAAAATAGAGG
GTTTGGGTTTGGGTTTTAGTTTCCGACCAGGAAAGCCGGTGGAAGATGGCGGAGTGAGTGTGAATGGGAATGGGAATGTGAAGGAAGCTGTTACCAAGAGCTTCCAAAAG
ACGAAGGAAATGGTGGAGGATTCTGCCAAAGCTGCCGGTGAAACGCTTCAACAACAACAACAACAACCACCGCCACATTCAGAACTCTAG
mRNA sequenceShow/hide mRNA sequence
ATGGAGAAGAAGGAGAAGATTGGTGTTTTTGTTTTGGTTTTGTGGATGCTGATTATTATTGTTGGTGTTGGAAAGGCTCATGAGGAAGCACCAAATAACATATTTTCAGA
AACAGTGAAATCAGCAGAAGCAGTTAGCCCTAATCCTAATTCTTACTGGGAAGAAGTTCGAAAGCTGGTCAATAAAGCTTACACGTATCTATTCCCTCCCAAAATAGAGG
GTTTGGGTTTGGGTTTTAGTTTCCGACCAGGAAAGCCGGTGGAAGATGGCGGAGTGAGTGTGAATGGGAATGGGAATGTGAAGGAAGCTGTTACCAAGAGCTTCCAAAAG
ACGAAGGAAATGGTGGAGGATTCTGCCAAAGCTGCCGGTGAAACGCTTCAACAACAACAACAACAACCACCGCCACATTCAGAACTCTAG
Protein sequenceShow/hide protein sequence
MEKKEKIGVFVLVLWMLIIIVGVGKAHEEAPNNIFSETVKSAEAVSPNPNSYWEEVRKLVNKAYTYLFPPKIEGLGLGFSFRPGKPVEDGGVSVNGNGNVKEAVTKSFQK
TKEMVEDSAKAAGETLQQQQQQPPPHSEL