; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

HG10002447 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10002447
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionSerine/arginine repetitive matrix protein 2
Genome locationChr11:6846665..6847244
RNA-Seq ExpressionHG10002447
SyntenyHG10002447
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8646378.1 hypothetical protein Csa_015587 [Cucumis sativus]3.0e-6584.38Show/hide
Query:  MSLSSLSKSQALTLTLNLLRPHPRSLSPIHSLFRRTFSSPSDNDLTDLSESP-SSDPLLRNLEDAIQRILVRRSAPDWLPFVPGASYWVPLPSNSHLPPI
        MSLS+LSK ++LTLTLNLLRPH         LFRR FSSPSD+DLTDL ESP SSDPLLRNLEDAIQRILVRRSAPDWLPFVPGASYWVPLPSNSHLPPI
Subjt:  MSLSSLSKSQALTLTLNLLRPHPRSLSPIHSLFRRTFSSPSDNDLTDLSESP-SSDPLLRNLEDAIQRILVRRSAPDWLPFVPGASYWVPLPSNSHLPPI

Query:  ANVLHNLANPLSPEQSLSTTTVRGWPSSNYFIHGPHLPSLEPEVETTSAECDASPDHEEG
        ANVL NLANPLSPEQSLSTTTVRGWPSS+YFI G HLPSL+PEV+TTS ECDAS DHEEG
Subjt:  ANVLHNLANPLSPEQSLSTTTVRGWPSSNYFIHGPHLPSLEPEVETTSAECDASPDHEEG

KAG7018211.1 hypothetical protein SDJN02_20079, partial [Cucurbita argyrosperma subsp. argyrosperma]3.6e-6383.85Show/hide
Query:  MSLS-SLSKSQALTLTLNLLRPHPRSLSPIHSLFRRTFSSPSDNDLTDLSESPSSDPLLRNLEDAIQRILVRRSAPDWLPFVPGASYWVPLPSNSHLPPI
        MSLS S S+S  LTLTLNLLRP    LSP+ SL RRTFSS  DNDLTDLSESPSSDPLLRNLEDAIQRILVRRSAPDWLPFVPGASYWVPLPS SHLPPI
Subjt:  MSLS-SLSKSQALTLTLNLLRPHPRSLSPIHSLFRRTFSSPSDNDLTDLSESPSSDPLLRNLEDAIQRILVRRSAPDWLPFVPGASYWVPLPSNSHLPPI

Query:  ANVLHNLANPLSPEQSLSTTTVRGWPSSNYFIHGPHLPSLEPEVETTSAECDAS--PDHEE
        AN+LHN ANPLSPEQSLSTTTVRGWPSS++FI G HLPSLEPEVET SAEC+AS   DHEE
Subjt:  ANVLHNLANPLSPEQSLSTTTVRGWPSSNYFIHGPHLPSLEPEVETTSAECDAS--PDHEE

XP_004135962.1 uncharacterized protein LOC101214133 [Cucumis sativus]3.0e-6584.38Show/hide
Query:  MSLSSLSKSQALTLTLNLLRPHPRSLSPIHSLFRRTFSSPSDNDLTDLSESP-SSDPLLRNLEDAIQRILVRRSAPDWLPFVPGASYWVPLPSNSHLPPI
        MSLS+LSK ++LTLTLNLLRPH         LFRR FSSPSD+DLTDL ESP SSDPLLRNLEDAIQRILVRRSAPDWLPFVPGASYWVPLPSNSHLPPI
Subjt:  MSLSSLSKSQALTLTLNLLRPHPRSLSPIHSLFRRTFSSPSDNDLTDLSESP-SSDPLLRNLEDAIQRILVRRSAPDWLPFVPGASYWVPLPSNSHLPPI

Query:  ANVLHNLANPLSPEQSLSTTTVRGWPSSNYFIHGPHLPSLEPEVETTSAECDASPDHEEG
        ANVL NLANPLSPEQSLSTTTVRGWPSS+YFI G HLPSL+PEV+TTS ECDAS DHEEG
Subjt:  ANVLHNLANPLSPEQSLSTTTVRGWPSSNYFIHGPHLPSLEPEVETTSAECDASPDHEEG

XP_022956127.1 uncharacterized protein LOC111457911 isoform X2 [Cucurbita moschata]3.6e-6383.85Show/hide
Query:  MSLS-SLSKSQALTLTLNLLRPHPRSLSPIHSLFRRTFSSPSDNDLTDLSESPSSDPLLRNLEDAIQRILVRRSAPDWLPFVPGASYWVPLPSNSHLPPI
        MSLS S S+S  LTLTLNLLRP    LSP+ SL RRTFSS  DNDLTDLSESPSSDPLLRNLEDAIQRILVRRSAPDWLPFVPGASYWVPLPS SHLPPI
Subjt:  MSLS-SLSKSQALTLTLNLLRPHPRSLSPIHSLFRRTFSSPSDNDLTDLSESPSSDPLLRNLEDAIQRILVRRSAPDWLPFVPGASYWVPLPSNSHLPPI

Query:  ANVLHNLANPLSPEQSLSTTTVRGWPSSNYFIHGPHLPSLEPEVETTSAECDAS--PDHEE
        AN+LHN ANPLSPEQSLSTTTVRGWPSS++FI G HLPSLEPEVET SAEC+AS   DHEE
Subjt:  ANVLHNLANPLSPEQSLSTTTVRGWPSSNYFIHGPHLPSLEPEVETTSAECDAS--PDHEE

XP_022980733.1 uncharacterized protein LOC111480015 isoform X1 [Cucurbita maxima]3.6e-6383.23Show/hide
Query:  MSLS-SLSKSQALTLTLNLLRPHPRSLS-PIHSLFRRTFSSPSDNDLTDLSESPSSDPLLRNLEDAIQRILVRRSAPDWLPFVPGASYWVPLPSNSHLPP
        MSLS S S+S  LTLTLNLLRP PR    P+ SL RRTFSS +DNDLTDLSESPSSDPLLRNLEDAIQRILVRRSAPDWLPFVPGASYWVPLPS SHLPP
Subjt:  MSLS-SLSKSQALTLTLNLLRPHPRSLS-PIHSLFRRTFSSPSDNDLTDLSESPSSDPLLRNLEDAIQRILVRRSAPDWLPFVPGASYWVPLPSNSHLPP

Query:  IANVLHNLANPLSPEQSLSTTTVRGWPSSNYFIHGPHLPSLEPEVETTSAECDAS--PDHE
        IAN+LHN ANPLSPEQSLSTTTVRGWPSS++FI G HLPSLEPEVET SAEC+AS   DHE
Subjt:  IANVLHNLANPLSPEQSLSTTTVRGWPSSNYFIHGPHLPSLEPEVETTSAECDAS--PDHE

TrEMBL top hitse value%identityAlignment
A0A0A0K9L9 Uncharacterized protein1.4e-6584.38Show/hide
Query:  MSLSSLSKSQALTLTLNLLRPHPRSLSPIHSLFRRTFSSPSDNDLTDLSESP-SSDPLLRNLEDAIQRILVRRSAPDWLPFVPGASYWVPLPSNSHLPPI
        MSLS+LSK ++LTLTLNLLRPH         LFRR FSSPSD+DLTDL ESP SSDPLLRNLEDAIQRILVRRSAPDWLPFVPGASYWVPLPSNSHLPPI
Subjt:  MSLSSLSKSQALTLTLNLLRPHPRSLSPIHSLFRRTFSSPSDNDLTDLSESP-SSDPLLRNLEDAIQRILVRRSAPDWLPFVPGASYWVPLPSNSHLPPI

Query:  ANVLHNLANPLSPEQSLSTTTVRGWPSSNYFIHGPHLPSLEPEVETTSAECDASPDHEEG
        ANVL NLANPLSPEQSLSTTTVRGWPSS+YFI G HLPSL+PEV+TTS ECDAS DHEEG
Subjt:  ANVLHNLANPLSPEQSLSTTTVRGWPSSNYFIHGPHLPSLEPEVETTSAECDASPDHEEG

A0A6J1GVG9 uncharacterized protein LOC111457911 isoform X21.8e-6383.85Show/hide
Query:  MSLS-SLSKSQALTLTLNLLRPHPRSLSPIHSLFRRTFSSPSDNDLTDLSESPSSDPLLRNLEDAIQRILVRRSAPDWLPFVPGASYWVPLPSNSHLPPI
        MSLS S S+S  LTLTLNLLRP    LSP+ SL RRTFSS  DNDLTDLSESPSSDPLLRNLEDAIQRILVRRSAPDWLPFVPGASYWVPLPS SHLPPI
Subjt:  MSLS-SLSKSQALTLTLNLLRPHPRSLSPIHSLFRRTFSSPSDNDLTDLSESPSSDPLLRNLEDAIQRILVRRSAPDWLPFVPGASYWVPLPSNSHLPPI

Query:  ANVLHNLANPLSPEQSLSTTTVRGWPSSNYFIHGPHLPSLEPEVETTSAECDAS--PDHEE
        AN+LHN ANPLSPEQSLSTTTVRGWPSS++FI G HLPSLEPEVET SAEC+AS   DHEE
Subjt:  ANVLHNLANPLSPEQSLSTTTVRGWPSSNYFIHGPHLPSLEPEVETTSAECDAS--PDHEE

A0A6J1GVQ5 uncharacterized protein LOC111457911 isoform X15.1e-6383.75Show/hide
Query:  MSLS-SLSKSQALTLTLNLLRPHPRSLSPIHSLFRRTFSSPSDNDLTDLSESPSSDPLLRNLEDAIQRILVRRSAPDWLPFVPGASYWVPLPSNSHLPPI
        MSLS S S+S  LTLTLNLLRP    LSP+ SL RRTFSS  DNDLTDLSESPSSDPLLRNLEDAIQRILVRRSAPDWLPFVPGASYWVPLPS SHLPPI
Subjt:  MSLS-SLSKSQALTLTLNLLRPHPRSLSPIHSLFRRTFSSPSDNDLTDLSESPSSDPLLRNLEDAIQRILVRRSAPDWLPFVPGASYWVPLPSNSHLPPI

Query:  ANVLHNLANPLSPEQSLSTTTVRGWPSSNYFIHGPHLPSLEPEVETTSAECDAS--PDHE
        AN+LHN ANPLSPEQSLSTTTVRGWPSS++FI G HLPSLEPEVET SAEC+AS   DHE
Subjt:  ANVLHNLANPLSPEQSLSTTTVRGWPSSNYFIHGPHLPSLEPEVETTSAECDAS--PDHE

A0A6J1J031 uncharacterized protein LOC111480015 isoform X21.8e-6383.23Show/hide
Query:  MSLS-SLSKSQALTLTLNLLRPHPRSLS-PIHSLFRRTFSSPSDNDLTDLSESPSSDPLLRNLEDAIQRILVRRSAPDWLPFVPGASYWVPLPSNSHLPP
        MSLS S S+S  LTLTLNLLRP PR    P+ SL RRTFSS +DNDLTDLSESPSSDPLLRNLEDAIQRILVRRSAPDWLPFVPGASYWVPLPS SHLPP
Subjt:  MSLS-SLSKSQALTLTLNLLRPHPRSLS-PIHSLFRRTFSSPSDNDLTDLSESPSSDPLLRNLEDAIQRILVRRSAPDWLPFVPGASYWVPLPSNSHLPP

Query:  IANVLHNLANPLSPEQSLSTTTVRGWPSSNYFIHGPHLPSLEPEVETTSAECDAS--PDHE
        IAN+LHN ANPLSPEQSLSTTTVRGWPSS++FI G HLPSLEPEVET SAEC+AS   DHE
Subjt:  IANVLHNLANPLSPEQSLSTTTVRGWPSSNYFIHGPHLPSLEPEVETTSAECDAS--PDHE

A0A6J1J062 uncharacterized protein LOC111480015 isoform X11.8e-6383.23Show/hide
Query:  MSLS-SLSKSQALTLTLNLLRPHPRSLS-PIHSLFRRTFSSPSDNDLTDLSESPSSDPLLRNLEDAIQRILVRRSAPDWLPFVPGASYWVPLPSNSHLPP
        MSLS S S+S  LTLTLNLLRP PR    P+ SL RRTFSS +DNDLTDLSESPSSDPLLRNLEDAIQRILVRRSAPDWLPFVPGASYWVPLPS SHLPP
Subjt:  MSLS-SLSKSQALTLTLNLLRPHPRSLS-PIHSLFRRTFSSPSDNDLTDLSESPSSDPLLRNLEDAIQRILVRRSAPDWLPFVPGASYWVPLPSNSHLPP

Query:  IANVLHNLANPLSPEQSLSTTTVRGWPSSNYFIHGPHLPSLEPEVETTSAECDAS--PDHE
        IAN+LHN ANPLSPEQSLSTTTVRGWPSS++FI G HLPSLEPEVET SAEC+AS   DHE
Subjt:  IANVLHNLANPLSPEQSLSTTTVRGWPSSNYFIHGPHLPSLEPEVETTSAECDAS--PDHE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G16840.1 unknown protein1.3e-2647.47Show/hide
Query:  SKSQALTLTLNLLRPHPRSLSP-IHSLFRRTFSSPSDNDLTDL-----SESPSSDPLLRNLEDAIQRILVRRSAPDWLPFVPGASYWVPLP-SNSHLPPI
        S S++L+L+         SL P  H +  R+ SS    DL ++     S+SP SDPL++ LEDA+ RI VRR+ PDWLPFVPGASYWVP P S S    I
Subjt:  SKSQALTLTLNLLRPHPRSLSP-IHSLFRRTFSSPSDNDLTDL-----SESPSSDPLLRNLEDAIQRILVRRSAPDWLPFVPGASYWVPLP-SNSHLPPI

Query:  ANVLHNLANPLSPEQSLSTTTVRGWPSSNYFIHGPHLPSLEPEVETTSAECDASPDHE
        A ++  LANPL+ E+SLST +  GWPSS+YF+ G     +E + ETTS     S D E
Subjt:  ANVLHNLANPLSPEQSLSTTTVRGWPSSNYFIHGPHLPSLEPEVETTSAECDASPDHE

AT1G16840.2 unknown protein2.7e-2449.26Show/hide
Query:  SKSQALTLTLNLLRPHPRSLSP-IHSLFRRTFSSPSDNDLTDL-----SESPSSDPLLRNLEDAIQRILVRRSAPDWLPFVPGASYWVPLP-SNSHLPPI
        S S++L+L+         SL P  H +  R+ SS    DL ++     S+SP SDPL++ LEDA+ RI VRR+ PDWLPFVPGASYWVP P S S    I
Subjt:  SKSQALTLTLNLLRPHPRSLSP-IHSLFRRTFSSPSDNDLTDL-----SESPSSDPLLRNLEDAIQRILVRRSAPDWLPFVPGASYWVPLP-SNSHLPPI

Query:  ANVLHNLANPLSPEQSLSTTTVRGWPSSNYFIHGPH
        A ++  LANPL+ E+SLST +  GWPSS+YF+ G +
Subjt:  ANVLHNLANPLSPEQSLSTTTVRGWPSSNYFIHGPH

AT1G16840.3 unknown protein1.3e-2647.47Show/hide
Query:  SKSQALTLTLNLLRPHPRSLSP-IHSLFRRTFSSPSDNDLTDL-----SESPSSDPLLRNLEDAIQRILVRRSAPDWLPFVPGASYWVPLP-SNSHLPPI
        S S++L+L+         SL P  H +  R+ SS    DL ++     S+SP SDPL++ LEDA+ RI VRR+ PDWLPFVPGASYWVP P S S    I
Subjt:  SKSQALTLTLNLLRPHPRSLSP-IHSLFRRTFSSPSDNDLTDL-----SESPSSDPLLRNLEDAIQRILVRRSAPDWLPFVPGASYWVPLP-SNSHLPPI

Query:  ANVLHNLANPLSPEQSLSTTTVRGWPSSNYFIHGPHLPSLEPEVETTSAECDASPDHE
        A ++  LANPL+ E+SLST +  GWPSS+YF+ G     +E + ETTS     S D E
Subjt:  ANVLHNLANPLSPEQSLSTTTVRGWPSSNYFIHGPHLPSLEPEVETTSAECDASPDHE

AT1G16840.4 unknown protein1.3e-2647.47Show/hide
Query:  SKSQALTLTLNLLRPHPRSLSP-IHSLFRRTFSSPSDNDLTDL-----SESPSSDPLLRNLEDAIQRILVRRSAPDWLPFVPGASYWVPLP-SNSHLPPI
        S S++L+L+         SL P  H +  R+ SS    DL ++     S+SP SDPL++ LEDA+ RI VRR+ PDWLPFVPGASYWVP P S S    I
Subjt:  SKSQALTLTLNLLRPHPRSLSP-IHSLFRRTFSSPSDNDLTDL-----SESPSSDPLLRNLEDAIQRILVRRSAPDWLPFVPGASYWVPLP-SNSHLPPI

Query:  ANVLHNLANPLSPEQSLSTTTVRGWPSSNYFIHGPHLPSLEPEVETTSAECDASPDHE
        A ++  LANPL+ E+SLST +  GWPSS+YF+ G     +E + ETTS     S D E
Subjt:  ANVLHNLANPLSPEQSLSTTTVRGWPSSNYFIHGPHLPSLEPEVETTSAECDASPDHE

AT1G78890.1 unknown protein8.5e-2657.73Show/hide
Query:  SSDPLLRNLEDAIQRILVRRSAPDWLPFVPGASYWVPLP-SNSHLPPIANVLHNLANPLSPEQSLSTTTVRGWPSSNYFIHGPHLPSLEPEVETTSA
        ++DPL+  LEDA+ RI+VRRSAPDWLPFVPGAS+WVP P S SH   IA ++  LANP+S E+S+S ++VRGWP S+YFI G    S+E E+ + +A
Subjt:  SSDPLLRNLEDAIQRILVRRSAPDWLPFVPGASYWVPLP-SNSHLPPIANVLHNLANPLSPEQSLSTTTVRGWPSSNYFIHGPHLPSLEPEVETTSA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTCTCTCTTCTCTATCCAAATCCCAAGCCCTAACCCTAACCCTAAATCTCCTCCGTCCTCATCCTCGTTCTTTATCTCCCATTCACTCCCTCTTCCGCCGTACTTT
CTCCTCCCCTTCCGATAACGATCTCACCGACCTCTCTGAATCTCCTTCCTCCGATCCCCTTCTTCGGAACCTTGAGGACGCTATTCAACGGATCCTCGTTCGCCGATCTG
CCCCCGATTGGCTCCCCTTCGTTCCAGGCGCTTCATATTGGGTTCCTCTGCCTTCTAATTCTCATTTACCTCCAATTGCCAACGTTCTTCACAATTTAGCTAACCCTCTC
TCTCCAGAACAATCCTTGTCTACCACTACCGTTCGTGGCTGGCCCTCTTCTAATTACTTCATTCACGGTCCTCATCTCCCTTCTCTTGAGCCGGAGGTTGAGACTACGTC
GGCGGAATGTGATGCTTCCCCTGACCACGAGGAAGGATGA
mRNA sequenceShow/hide mRNA sequence
ATGTCTCTCTCTTCTCTATCCAAATCCCAAGCCCTAACCCTAACCCTAAATCTCCTCCGTCCTCATCCTCGTTCTTTATCTCCCATTCACTCCCTCTTCCGCCGTACTTT
CTCCTCCCCTTCCGATAACGATCTCACCGACCTCTCTGAATCTCCTTCCTCCGATCCCCTTCTTCGGAACCTTGAGGACGCTATTCAACGGATCCTCGTTCGCCGATCTG
CCCCCGATTGGCTCCCCTTCGTTCCAGGCGCTTCATATTGGGTTCCTCTGCCTTCTAATTCTCATTTACCTCCAATTGCCAACGTTCTTCACAATTTAGCTAACCCTCTC
TCTCCAGAACAATCCTTGTCTACCACTACCGTTCGTGGCTGGCCCTCTTCTAATTACTTCATTCACGGTCCTCATCTCCCTTCTCTTGAGCCGGAGGTTGAGACTACGTC
GGCGGAATGTGATGCTTCCCCTGACCACGAGGAAGGATGA
Protein sequenceShow/hide protein sequence
MSLSSLSKSQALTLTLNLLRPHPRSLSPIHSLFRRTFSSPSDNDLTDLSESPSSDPLLRNLEDAIQRILVRRSAPDWLPFVPGASYWVPLPSNSHLPPIANVLHNLANPL
SPEQSLSTTTVRGWPSSNYFIHGPHLPSLEPEVETTSAECDASPDHEEG