CuGenDBv2

Gene ID	HG10002449
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	mediator of RNA polymerase II transcription subunit 8 isoform X1
Genome location	Chr11:6863625..6876825
RNA-Seq Expression	HG10002449
Synteny	HG10002449
Gene Ontology terms	GO:0016592 - mediator complex (cellular component)
InterPro domains	IPR038795 - Mediator of RNA polymerase II transcription subunit 8, plant

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_011651696.1 mediator of RNA polymerase II transcription subunit 8 isoform X1 [Cucumis sativus]

2.4e-149

78.78

Show/hide

Query:  MATMDGVVQNQPQQQQPLPAQQVVVAERLNQAVQQQLNLEALKTRATTLFKAISRILEDFDVYGRTNTTPKWQDILGQYSMVNLELFNIVDEIKKVSKAF
        MAT+DG VQNQPQQQQPLPAQQVV AERLNQAVQQQLNLEALK RATTLFKAISRILEDFDVYGRTNTTPKWQDILGQYSMVNLELFNIVDEIKKVSKAF
Subjt:  MATMDGVVQNQPQQQQPLPAQQVVVAERLNQAVQQQLNLEALKTRATTLFKAISRILEDFDVYGRTNTTPKWQDILGQYSMVNLELFNIVDEIKKVSKAF

Query:  VVHPKNVNAENSTILPVMLSSKLLPEMEVDDNSKREQLLLGMHNMPVSTQIEKLKTRIEMIGAACESAEKILAETRKAYCFGMRQGPAIAPTLDKAQAAK
        VVHPKNVNAENSTILPVMLSSKLLPEMEVDDNSKREQLLLGMHNMPVSTQIEKLKTRIEMIGAACESAEKILAETRKAYCFGMRQGPAIAPTLDKAQAAK
Subjt:  VVHPKNVNAENSTILPVMLSSKLLPEMEVDDNSKREQLLLGMHNMPVSTQIEKLKTRIEMIGAACESAEKILAETRKAYCFGMRQGPAIAPTLDKAQAAK

Query:  IQEQENLLRAAVNFGEEIQMEKTTGVPMVVHDDSDTTMILASVQTETRDDRRTVDRGLQSEEECAADVQIRVCSHKRVRKGARLRLPGEQRQITPTLPMH
        IQEQENLLRAAVNFGE                                                                   LRLPGEQRQITPTLPMH
Subjt:  IQEQENLLRAAVNFGEEIQMEKTTGVPMVVHDDSDTTMILASVQTETRDDRRTVDRGLQSEEECAADVQIRVCSHKRVRKGARLRLPGEQRQITPTLPMH

Query:  LIDVLNVGDGVQSFNETSGIYTKNTPLTSNNISGQGALIQQPPGSQLVGRSAASPSGATSATSFDTTTSPLPYANSP
        LIDVLN GDGVQSFNETSG+Y K+TPLTSNNIS QGA+IQQPPGSQLVGRSAASPSGATSATSFD +TSP+PYANSP
Subjt:  LIDVLNVGDGVQSFNETSGIYTKNTPLTSNNISGQGALIQQPPGSQLVGRSAASPSGATSATSFDTTTSPLPYANSP

XP_038874270.1 mediator of RNA polymerase II transcription subunit 8 isoform X6 [Benincasa hispida]

1.9e-149

79.84

Show/hide

Query:  MATMDGVVQNQPQQQQPLPAQQVVVAERLNQAVQQQLNLEALKTRATTLFKAISRILEDFDVYGRTNTTPKWQDILGQYSMVNLELFNIVDEIKKVSKAF
        MATMDG VQ QPQQQQPLPAQ V VAERLNQAVQQQLNLEALK RATTLFKAISRILEDFDVYGRTNTTPKWQDILGQYSMVNLELFNIVDEIKKVSKAF
Subjt:  MATMDGVVQNQPQQQQPLPAQQVVVAERLNQAVQQQLNLEALKTRATTLFKAISRILEDFDVYGRTNTTPKWQDILGQYSMVNLELFNIVDEIKKVSKAF

Query:  VVHPKNVNAENSTILPVMLSSKLLPEMEVDDNSKREQLLLGMHNMPVSTQIEKLKTRIEMIGAACESAEKILAETRKAYCFGMRQGPAIAPTLDKAQAAK
        VVHPKNVNAENSTILPVMLSSKLLPEMEVDDNSKREQLLLGMHNMPVSTQIEKLKTRIEMIGAACESAEKILAETRKAYCFGMRQGPAIAPTLDKAQAAK
Subjt:  VVHPKNVNAENSTILPVMLSSKLLPEMEVDDNSKREQLLLGMHNMPVSTQIEKLKTRIEMIGAACESAEKILAETRKAYCFGMRQGPAIAPTLDKAQAAK

Query:  IQEQENLLRAAVNFGEEIQMEKTTGVPMVVHDDSDTTMILASVQTETRDDRRTVDRGLQSEEECAADVQIRVCSHKRVRKGARLRLPGEQRQITPTLPMH
        IQEQENLLRAAVNFGE                                                                   LRLPGEQRQITPTLPMH
Subjt:  IQEQENLLRAAVNFGEEIQMEKTTGVPMVVHDDSDTTMILASVQTETRDDRRTVDRGLQSEEECAADVQIRVCSHKRVRKGARLRLPGEQRQITPTLPMH

Query:  LIDVLNVGDGVQSFNETSGIYTKNTPLTSNNISGQGALIQQPPGSQLVGRSAASPSGATSATSFDTTTSPLPYANSP
        LIDVLNVGDGVQSFNETSG+YTKNT LTSNNISGQG+LIQQPPGSQLVGRSAASPSGATSATSFD TTSPLPYANSP
Subjt:  LIDVLNVGDGVQSFNETSGIYTKNTPLTSNNISGQGALIQQPPGSQLVGRSAASPSGATSATSFDTTTSPLPYANSP

XP_038906890.1 mediator of RNA polymerase II transcription subunit 8 isoform X1 [Benincasa hispida]

1.9e-149

79.84

Show/hide

Query:  MATMDGVVQNQPQQQQPLPAQQVVVAERLNQAVQQQLNLEALKTRATTLFKAISRILEDFDVYGRTNTTPKWQDILGQYSMVNLELFNIVDEIKKVSKAF
        MATMDG VQ QPQQQQPLPAQ V VAERLNQAVQQQLNLEALK RATTLFKAISRILEDFDVYGRTNTTPKWQDILGQYSMVNLELFNIVDEIKKVSKAF
Subjt:  MATMDGVVQNQPQQQQPLPAQQVVVAERLNQAVQQQLNLEALKTRATTLFKAISRILEDFDVYGRTNTTPKWQDILGQYSMVNLELFNIVDEIKKVSKAF

Query:  VVHPKNVNAENSTILPVMLSSKLLPEMEVDDNSKREQLLLGMHNMPVSTQIEKLKTRIEMIGAACESAEKILAETRKAYCFGMRQGPAIAPTLDKAQAAK
        VVHPKNVNAENSTILPVMLSSKLLPEMEVDDNSKREQLLLGMHNMPVSTQIEKLKTRIEMIGAACESAEKILAETRKAYCFGMRQGPAIAPTLDKAQAAK
Subjt:  VVHPKNVNAENSTILPVMLSSKLLPEMEVDDNSKREQLLLGMHNMPVSTQIEKLKTRIEMIGAACESAEKILAETRKAYCFGMRQGPAIAPTLDKAQAAK

Query:  IQEQENLLRAAVNFGEEIQMEKTTGVPMVVHDDSDTTMILASVQTETRDDRRTVDRGLQSEEECAADVQIRVCSHKRVRKGARLRLPGEQRQITPTLPMH
        IQEQENLLRAAVNFGE                                                                   LRLPGEQRQITPTLPMH
Subjt:  IQEQENLLRAAVNFGEEIQMEKTTGVPMVVHDDSDTTMILASVQTETRDDRRTVDRGLQSEEECAADVQIRVCSHKRVRKGARLRLPGEQRQITPTLPMH

Query:  LIDVLNVGDGVQSFNETSGIYTKNTPLTSNNISGQGALIQQPPGSQLVGRSAASPSGATSATSFDTTTSPLPYANSP
        LIDVLNVGDGVQSFNETSG+YTKNT LTSNNISGQG+LIQQPPGSQLVGRSAASPSGATSATSFD TTSPLPYANSP
Subjt:  LIDVLNVGDGVQSFNETSGIYTKNTPLTSNNISGQGALIQQPPGSQLVGRSAASPSGATSATSFDTTTSPLPYANSP

XP_038907099.1 mediator of RNA polymerase II transcription subunit 8 isoform X3 [Benincasa hispida]

1.9e-149

79.84

Show/hide

Query:  MATMDGVVQNQPQQQQPLPAQQVVVAERLNQAVQQQLNLEALKTRATTLFKAISRILEDFDVYGRTNTTPKWQDILGQYSMVNLELFNIVDEIKKVSKAF
        MATMDG VQ QPQQQQPLPAQ V VAERLNQAVQQQLNLEALK RATTLFKAISRILEDFDVYGRTNTTPKWQDILGQYSMVNLELFNIVDEIKKVSKAF
Subjt:  MATMDGVVQNQPQQQQPLPAQQVVVAERLNQAVQQQLNLEALKTRATTLFKAISRILEDFDVYGRTNTTPKWQDILGQYSMVNLELFNIVDEIKKVSKAF

Query:  VVHPKNVNAENSTILPVMLSSKLLPEMEVDDNSKREQLLLGMHNMPVSTQIEKLKTRIEMIGAACESAEKILAETRKAYCFGMRQGPAIAPTLDKAQAAK
        VVHPKNVNAENSTILPVMLSSKLLPEMEVDDNSKREQLLLGMHNMPVSTQIEKLKTRIEMIGAACESAEKILAETRKAYCFGMRQGPAIAPTLDKAQAAK
Subjt:  VVHPKNVNAENSTILPVMLSSKLLPEMEVDDNSKREQLLLGMHNMPVSTQIEKLKTRIEMIGAACESAEKILAETRKAYCFGMRQGPAIAPTLDKAQAAK

Query:  IQEQENLLRAAVNFGEEIQMEKTTGVPMVVHDDSDTTMILASVQTETRDDRRTVDRGLQSEEECAADVQIRVCSHKRVRKGARLRLPGEQRQITPTLPMH
        IQEQENLLRAAVNFGE                                                                   LRLPGEQRQITPTLPMH
Subjt:  IQEQENLLRAAVNFGEEIQMEKTTGVPMVVHDDSDTTMILASVQTETRDDRRTVDRGLQSEEECAADVQIRVCSHKRVRKGARLRLPGEQRQITPTLPMH

Query:  LIDVLNVGDGVQSFNETSGIYTKNTPLTSNNISGQGALIQQPPGSQLVGRSAASPSGATSATSFDTTTSPLPYANSP
        LIDVLNVGDGVQSFNETSG+YTKNT LTSNNISGQG+LIQQPPGSQLVGRSAASPSGATSATSFD TTSPLPYANSP
Subjt:  LIDVLNVGDGVQSFNETSGIYTKNTPLTSNNISGQGALIQQPPGSQLVGRSAASPSGATSATSFDTTTSPLPYANSP

XP_038907177.1 mediator of RNA polymerase II transcription subunit 8 isoform X4 [Benincasa hispida]

1.9e-149

79.84

Show/hide

Query:  MATMDGVVQNQPQQQQPLPAQQVVVAERLNQAVQQQLNLEALKTRATTLFKAISRILEDFDVYGRTNTTPKWQDILGQYSMVNLELFNIVDEIKKVSKAF
        MATMDG VQ QPQQQQPLPAQ V VAERLNQAVQQQLNLEALK RATTLFKAISRILEDFDVYGRTNTTPKWQDILGQYSMVNLELFNIVDEIKKVSKAF
Subjt:  MATMDGVVQNQPQQQQPLPAQQVVVAERLNQAVQQQLNLEALKTRATTLFKAISRILEDFDVYGRTNTTPKWQDILGQYSMVNLELFNIVDEIKKVSKAF

Query:  VVHPKNVNAENSTILPVMLSSKLLPEMEVDDNSKREQLLLGMHNMPVSTQIEKLKTRIEMIGAACESAEKILAETRKAYCFGMRQGPAIAPTLDKAQAAK
        VVHPKNVNAENSTILPVMLSSKLLPEMEVDDNSKREQLLLGMHNMPVSTQIEKLKTRIEMIGAACESAEKILAETRKAYCFGMRQGPAIAPTLDKAQAAK
Subjt:  VVHPKNVNAENSTILPVMLSSKLLPEMEVDDNSKREQLLLGMHNMPVSTQIEKLKTRIEMIGAACESAEKILAETRKAYCFGMRQGPAIAPTLDKAQAAK

Query:  IQEQENLLRAAVNFGEEIQMEKTTGVPMVVHDDSDTTMILASVQTETRDDRRTVDRGLQSEEECAADVQIRVCSHKRVRKGARLRLPGEQRQITPTLPMH
        IQEQENLLRAAVNFGE                                                                   LRLPGEQRQITPTLPMH
Subjt:  IQEQENLLRAAVNFGEEIQMEKTTGVPMVVHDDSDTTMILASVQTETRDDRRTVDRGLQSEEECAADVQIRVCSHKRVRKGARLRLPGEQRQITPTLPMH

Query:  LIDVLNVGDGVQSFNETSGIYTKNTPLTSNNISGQGALIQQPPGSQLVGRSAASPSGATSATSFDTTTSPLPYANSP
        LIDVLNVGDGVQSFNETSG+YTKNT LTSNNISGQG+LIQQPPGSQLVGRSAASPSGATSATSFD TTSPLPYANSP
Subjt:  LIDVLNVGDGVQSFNETSGIYTKNTPLTSNNISGQGALIQQPPGSQLVGRSAASPSGATSATSFDTTTSPLPYANSP

TrEMBL top hits

e value

%identity

Alignment

A0A1S3CN44 mediator of RNA polymerase II transcription subunit 8 isoform X2

1.0e-145

77.72

Show/hide

Query:  MATMDGVVQNQPQQQQPLPAQQVVVAERLNQAVQQQLNLEALKTRATTLFKAISRILEDFDVYGRTNTTPKWQDILGQYSMVNLELFNIVDEIKKVSKAF
        MAT+DG VQNQPQQQQPLPAQQVV AERLNQAVQQQLNLEALK RATTLFKAISRILEDFDVYGRTNTTPKWQDILGQYSMVNLELFNIVDEIKKVSKAF
Subjt:  MATMDGVVQNQPQQQQPLPAQQVVVAERLNQAVQQQLNLEALKTRATTLFKAISRILEDFDVYGRTNTTPKWQDILGQYSMVNLELFNIVDEIKKVSKAF

Query:  VVHPKNVNAENSTILPVMLSSKLLPEMEVDDNSKREQLLLGMHNMPVSTQIEKLKTRIEMIGAACESAEKILAETRKAYCFGMRQGPAIAPTLDKAQAAK
        VVHPKNVNAENSTILPVMLSSKLLPEMEVDDNSKREQLLLGMHNMPVSTQIEKLKTRIEMIGAACESAEKILAETRKAYCFGMRQGPAI PTLDKAQAAK
Subjt:  VVHPKNVNAENSTILPVMLSSKLLPEMEVDDNSKREQLLLGMHNMPVSTQIEKLKTRIEMIGAACESAEKILAETRKAYCFGMRQGPAIAPTLDKAQAAK

Query:  IQEQENLLRAAVNFGEEIQMEKTTGVPMVVHDDSDTTMILASVQTETRDDRRTVDRGLQSEEECAADVQIRVCSHKRVRKGARLRLPGEQRQITPTLPMH
        IQEQENLLRAAVNFGE                                                                   LRLPGEQRQIT TLPMH
Subjt:  IQEQENLLRAAVNFGEEIQMEKTTGVPMVVHDDSDTTMILASVQTETRDDRRTVDRGLQSEEECAADVQIRVCSHKRVRKGARLRLPGEQRQITPTLPMH

Query:  LIDVLNVGDGVQSFNETSGIYTKNTPLTSNNISGQGALIQQPPGSQLVGRSAASPSGATSATSFDTTTSPLPYANSP
        LIDVLN GDGVQSFNETSG+Y K+TPLTS NIS QGA+I QPPGSQLVGRSAASPSGATSATSFD +TSP+PYANSP
Subjt:  LIDVLNVGDGVQSFNETSGIYTKNTPLTSNNISGQGALIQQPPGSQLVGRSAASPSGATSATSFDTTTSPLPYANSP

A0A1S3CPL4 mediator of RNA polymerase II transcription subunit 8 isoform X1

1.4e-147

77.98

Show/hide

Query:  MATMDGVVQNQPQQQQPLPAQQVVVAERLNQAVQQQLNLEALKTRATTLFKAISRILEDFDVYGRTNTTPKWQDILGQYSMVNLELFNIVDEIKKVSKAF
        MAT+DG VQNQPQQQQPLPAQQVV AERLNQAVQQQLNLEALK RATTLFKAISRILEDFDVYGRTNTTPKWQDILGQYSMVNLELFNIVDEIKKVSKAF
Subjt:  MATMDGVVQNQPQQQQPLPAQQVVVAERLNQAVQQQLNLEALKTRATTLFKAISRILEDFDVYGRTNTTPKWQDILGQYSMVNLELFNIVDEIKKVSKAF

Query:  VVHPKNVNAENSTILPVMLSSKLLPEMEVDDNSKREQLLLGMHNMPVSTQIEKLKTRIEMIGAACESAEKILAETRKAYCFGMRQGPAIAPTLDKAQAAK
        VVHPKNVNAENSTILPVMLSSKLLPEMEVDDNSKREQLLLGMHNMPVSTQIEKLKTRIEMIGAACESAEKILAETRKAYCFGMRQGPAI PTLDKAQAAK
Subjt:  VVHPKNVNAENSTILPVMLSSKLLPEMEVDDNSKREQLLLGMHNMPVSTQIEKLKTRIEMIGAACESAEKILAETRKAYCFGMRQGPAIAPTLDKAQAAK

Query:  IQEQENLLRAAVNFGEEIQMEKTTGVPMVVHDDSDTTMILASVQTETRDDRRTVDRGLQSEEECAADVQIRVCSHKRVRKGARLRLPGEQRQITPTLPMH
        IQEQENLLRAAVNFGE                                                                   LRLPGEQRQIT TLPMH
Subjt:  IQEQENLLRAAVNFGEEIQMEKTTGVPMVVHDDSDTTMILASVQTETRDDRRTVDRGLQSEEECAADVQIRVCSHKRVRKGARLRLPGEQRQITPTLPMH

Query:  LIDVLNVGDGVQSFNETSGIYTKNTPLTSNNISGQGALIQQPPGSQLVGRSAASPSGATSATSFDTTTSPLPYANSP
        LIDVLN GDGVQSFNETSG+Y K+TPLTS NIS QGA+IQQPPGSQLVGRSAASPSGATSATSFD +TSP+PYANSP
Subjt:  LIDVLNVGDGVQSFNETSGIYTKNTPLTSNNISGQGALIQQPPGSQLVGRSAASPSGATSATSFDTTTSPLPYANSP

A0A5A7VLA2 Mediator of RNA polymerase II transcription subunit 8 isoform X1

1.4e-147

77.98

Show/hide

Query:  MATMDGVVQNQPQQQQPLPAQQVVVAERLNQAVQQQLNLEALKTRATTLFKAISRILEDFDVYGRTNTTPKWQDILGQYSMVNLELFNIVDEIKKVSKAF
        MAT+DG VQNQPQQQQPLPAQQVV AERLNQAVQQQLNLEALK RATTLFKAISRILEDFDVYGRTNTTPKWQDILGQYSMVNLELFNIVDEIKKVSKAF
Subjt:  MATMDGVVQNQPQQQQPLPAQQVVVAERLNQAVQQQLNLEALKTRATTLFKAISRILEDFDVYGRTNTTPKWQDILGQYSMVNLELFNIVDEIKKVSKAF

Query:  VVHPKNVNAENSTILPVMLSSKLLPEMEVDDNSKREQLLLGMHNMPVSTQIEKLKTRIEMIGAACESAEKILAETRKAYCFGMRQGPAIAPTLDKAQAAK
        VVHPKNVNAENSTILPVMLSSKLLPEMEVDDNSKREQLLLGMHNMPVSTQIEKLKTRIEMIGAACESAEKILAETRKAYCFGMRQGPAI PTLDKAQAAK
Subjt:  VVHPKNVNAENSTILPVMLSSKLLPEMEVDDNSKREQLLLGMHNMPVSTQIEKLKTRIEMIGAACESAEKILAETRKAYCFGMRQGPAIAPTLDKAQAAK

Query:  IQEQENLLRAAVNFGEEIQMEKTTGVPMVVHDDSDTTMILASVQTETRDDRRTVDRGLQSEEECAADVQIRVCSHKRVRKGARLRLPGEQRQITPTLPMH
        IQEQENLLRAAVNFGE                                                                   LRLPGEQRQIT TLPMH
Subjt:  IQEQENLLRAAVNFGEEIQMEKTTGVPMVVHDDSDTTMILASVQTETRDDRRTVDRGLQSEEECAADVQIRVCSHKRVRKGARLRLPGEQRQITPTLPMH

Query:  LIDVLNVGDGVQSFNETSGIYTKNTPLTSNNISGQGALIQQPPGSQLVGRSAASPSGATSATSFDTTTSPLPYANSP
        LIDVLN GDGVQSFNETSG+Y K+TPLTS NIS QGA+IQQPPGSQLVGRSAASPSGATSATSFD +TSP+PYANSP
Subjt:  LIDVLNVGDGVQSFNETSGIYTKNTPLTSNNISGQGALIQQPPGSQLVGRSAASPSGATSATSFDTTTSPLPYANSP

A0A6J1GV67 mediator of RNA polymerase II transcription subunit 8 isoform X1

1.3e-143

76.66

Show/hide

Query:  MATMDGVVQNQPQQQQPLPAQQVVVAERLNQAVQQQLNLEALKTRATTLFKAISRILEDFDVYGRTNTTPKWQDILGQYSMVNLELFNIVDEIKKVSKAF
        MATMDGVVQNQPQQQQPL A Q VVAERLNQAVQQQLNLEA+KTRATTLFKAISRILEDFDVYGRTNTTPKWQDILGQYSMVNLELFNIVDEIKKVSKAF
Subjt:  MATMDGVVQNQPQQQQPLPAQQVVVAERLNQAVQQQLNLEALKTRATTLFKAISRILEDFDVYGRTNTTPKWQDILGQYSMVNLELFNIVDEIKKVSKAF

Query:  VVHPKNVNAENSTILPVMLSSKLLPEMEVDDNSKREQLLLGMHNMPVSTQIEKLKTRIEMIGAACESAEKILAETRKAYCFGMRQGPAIAPTLDKAQAAK
        VVHPKNVNAENSTILPVMLSSKLLPEMEVDDNSKR+QLLLGM NMP+STQIEKLKTRIEMIGAACESAEKILAETRKAYCFGMRQGPAIAPTLDKAQAAK
Subjt:  VVHPKNVNAENSTILPVMLSSKLLPEMEVDDNSKREQLLLGMHNMPVSTQIEKLKTRIEMIGAACESAEKILAETRKAYCFGMRQGPAIAPTLDKAQAAK

Query:  IQEQENLLRAAVNFGEEIQMEKTTGVPMVVHDDSDTTMILASVQTETRDDRRTVDRGLQSEEECAADVQIRVCSHKRVRKGARLRLPGEQRQITPTLPMH
        IQEQENLLRAAVNFGE                                                                   LRLP +QRQITPTLPMH
Subjt:  IQEQENLLRAAVNFGEEIQMEKTTGVPMVVHDDSDTTMILASVQTETRDDRRTVDRGLQSEEECAADVQIRVCSHKRVRKGARLRLPGEQRQITPTLPMH

Query:  LIDVLNVGDGVQSFNETSGIYTKNTPLTSNNISGQGALIQQPPGSQLVGRSAASPSGATSATSFDTTTSPLPYANSP
        L+DVLNVGDGVQSFNETSG+Y KNTPLTS+NI G G+L+QQPPGSQLVGRSAASPSG   ATSFD TTSPLPYANSP
Subjt:  LIDVLNVGDGVQSFNETSGIYTKNTPLTSNNISGQGALIQQPPGSQLVGRSAASPSGATSATSFDTTTSPLPYANSP

A0A6J1IZN9 mediator of RNA polymerase II transcription subunit 8 isoform X1

4.8e-143

76.39

Show/hide

Query:  MATMDGVVQNQPQQQQPLPAQQVVVAERLNQAVQQQLNLEALKTRATTLFKAISRILEDFDVYGRTNTTPKWQDILGQYSMVNLELFNIVDEIKKVSKAF
        MATMDGVVQNQPQQQQPL A QVVVAERLNQAVQQQLNLEA+KTRATTLFKAISRILEDFDVYGRTNTTPKWQDILGQYSMVNLELFNIVDEIKKVSKAF
Subjt:  MATMDGVVQNQPQQQQPLPAQQVVVAERLNQAVQQQLNLEALKTRATTLFKAISRILEDFDVYGRTNTTPKWQDILGQYSMVNLELFNIVDEIKKVSKAF

Query:  VVHPKNVNAENSTILPVMLSSKLLPEMEVDDNSKREQLLLGMHNMPVSTQIEKLKTRIEMIGAACESAEKILAETRKAYCFGMRQGPAIAPTLDKAQAAK
        VVHPKNVNAENSTILPVMLSSKLLPEMEV+DNSKR+QLLLGM NMP+STQIEKLKTRIEMIGAACESAEKILAETRKAYCFGMRQGPAIAPTLDKAQAAK
Subjt:  VVHPKNVNAENSTILPVMLSSKLLPEMEVDDNSKREQLLLGMHNMPVSTQIEKLKTRIEMIGAACESAEKILAETRKAYCFGMRQGPAIAPTLDKAQAAK

Query:  IQEQENLLRAAVNFGEEIQMEKTTGVPMVVHDDSDTTMILASVQTETRDDRRTVDRGLQSEEECAADVQIRVCSHKRVRKGARLRLPGEQRQITPTLPMH
        IQEQENLLRAAVNFGE                                                                   LRLP +QRQITPTLPMH
Subjt:  IQEQENLLRAAVNFGEEIQMEKTTGVPMVVHDDSDTTMILASVQTETRDDRRTVDRGLQSEEECAADVQIRVCSHKRVRKGARLRLPGEQRQITPTLPMH

Query:  LIDVLNVGDGVQSFNETSGIYTKNTPLTSNNISGQGALIQQPPGSQLVGRSAASPSGATSATSFDTTTSPLPYANSP
        L+DVLNVGDGVQSFNETSG+Y KNTPLTS+NI G G+L+QQPPGSQLVGRSAASPSG   ATSFD TT PLPYANSP
Subjt:  LIDVLNVGDGVQSFNETSGIYTKNTPLTSNNISGQGALIQQPPGSQLVGRSAASPSGATSATSFDTTTSPLPYANSP

SwissProt top hits

e value

%identity

Alignment

Q4V3C1 Mediator of RNA polymerase II transcription subunit 8

1.8e-86

52.43

Show/hide

Query:  VQNQPQQQQPLPAQQVVVAERLNQAVQQQLNLEALKTRATTLFKAISRILEDFDVYGRTNTTPKWQDILGQYSMVNLELFNIVDEIKKVSKAFVVHPKNV
        ++ QPQQ  P P     VAE+LN  ++++LNLE+LKTRA +L KAI+RILEDFD YGRTNTTPKWQDILGQYSMVNLELFNIV+E+K+VS AFVV PKNV
Subjt:  VQNQPQQQQPLPAQQVVVAERLNQAVQQQLNLEALKTRATTLFKAISRILEDFDVYGRTNTTPKWQDILGQYSMVNLELFNIVDEIKKVSKAFVVHPKNV

Query:  NAENSTILPVMLSSKLLPEMEVDDNSKREQLLLGMHNMPVSTQIEKLKTRIEMIGAACESAEKILAETRKAYCFGMRQGPAIAPTLDKAQAAKIQEQENL
        NA N+ ILPVMLSSKLLPEME DDN+KREQLL G+ ++P+  QIE+LK R++MI AACE+AE++LA+TRKAY FG RQGP++ PT+DK QAAKIQEQE +
Subjt:  NAENSTILPVMLSSKLLPEMEVDDNSKREQLLLGMHNMPVSTQIEKLKTRIEMIGAACESAEKILAETRKAYCFGMRQGPAIAPTLDKAQAAKIQEQENL

Query:  LRAAVNFGEEIQMEKTTGVPMVVHDDSDTTMILASVQTETRDDRRTVDRGLQSEEECAADVQIRVCSHKRVRKGARLRLPGEQRQITPTLPMHLIDVLNV
        LR AVN G+  Q                                                                  LP +QRQIT  LP HL DVL +
Subjt:  LRAAVNFGEEIQMEKTTGVPMVVHDDSDTTMILASVQTETRDDRRTVDRGLQSEEECAADVQIRVCSHKRVRKGARLRLPGEQRQITPTLPMHLIDVLNV

Query:  GDGVQSFNETSGIYTKNTPLTSNNISGQGALIQQPPGSQLVGRSAASPSGATSATSFDTTTSPLPYANSP
         D  +             P  SNNI+ QG  + Q  G+Q VGRSAASPSG     +FD TTSPLPY+NSP
Subjt:  GDGVQSFNETSGIYTKNTPLTSNNISGQGALIQQPPGSQLVGRSAASPSGATSATSFDTTTSPLPYANSP

Arabidopsis top hits

e value

%identity

Alignment

AT2G03070.1 mediator subunit 8

1.3e-87

52.43

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Query:  VQNQPQQQQPLPAQQVVVAERLNQAVQQQLNLEALKTRATTLFKAISRILEDFDVYGRTNTTPKWQDILGQYSMVNLELFNIVDEIKKVSKAFVVHPKNV
        ++ QPQQ  P P     VAE+LN  ++++LNLE+LKTRA +L KAI+RILEDFD YGRTNTTPKWQDILGQYSMVNLELFNIV+E+K+VS AFVV PKNV
Subjt:  VQNQPQQQQPLPAQQVVVAERLNQAVQQQLNLEALKTRATTLFKAISRILEDFDVYGRTNTTPKWQDILGQYSMVNLELFNIVDEIKKVSKAFVVHPKNV

Query:  NAENSTILPVMLSSKLLPEMEVDDNSKREQLLLGMHNMPVSTQIEKLKTRIEMIGAACESAEKILAETRKAYCFGMRQGPAIAPTLDKAQAAKIQEQENL
        NA N+ ILPVMLSSKLLPEME DDN+KREQLL G+ ++P+  QIE+LK R++MI AACE+AE++LA+TRKAY FG RQGP++ PT+DK QAAKIQEQE +
Subjt:  NAENSTILPVMLSSKLLPEMEVDDNSKREQLLLGMHNMPVSTQIEKLKTRIEMIGAACESAEKILAETRKAYCFGMRQGPAIAPTLDKAQAAKIQEQENL

Query:  LRAAVNFGEEIQMEKTTGVPMVVHDDSDTTMILASVQTETRDDRRTVDRGLQSEEECAADVQIRVCSHKRVRKGARLRLPGEQRQITPTLPMHLIDVLNV
        LR AVN G+  Q                                                                  LP +QRQIT  LP HL DVL +
Subjt:  LRAAVNFGEEIQMEKTTGVPMVVHDDSDTTMILASVQTETRDDRRTVDRGLQSEEECAADVQIRVCSHKRVRKGARLRLPGEQRQITPTLPMHLIDVLNV

Query:  GDGVQSFNETSGIYTKNTPLTSNNISGQGALIQQPPGSQLVGRSAASPSGATSATSFDTTTSPLPYANSP
         D  +             P  SNNI+ QG  + Q  G+Q VGRSAASPSG     +FD TTSPLPY+NSP
Subjt:  GDGVQSFNETSGIYTKNTPLTSNNISGQGALIQQPPGSQLVGRSAASPSGATSATSFDTTTSPLPYANSP

Sequences

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CDS sequence

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ATGGCAACCATGGACGGGGTGGTGCAGAATCAGCCTCAGCAGCAACAGCCTCTCCCGGCGCAGCAGGTGGTTGTCGCGGAGAGGCTAAACCAGGCAGTACAGCAACAGTT
GAACCTTGAGGCTCTGAAGACTCGAGCTACTACTCTATTTAAAGCCATCTCTCGGATCCTCGAAGATTTTGATGTCTACGGTCGCACCAATACGACACCTAAATGGCAAG
ACATACTGGGGCAATATTCTATGGTGAATCTCGAGCTTTTCAATATTGTTGACGAAATTAAGAAAGTTTCAAAGGCTTTCGTTGTACATCCAAAGAATGTTAATGCAGAG
AATTCTACAATACTACCAGTTATGTTGTCCTCAAAACTATTGCCTGAAATGGAGGTAGACGACAATTCTAAACGAGAGCAGTTGCTTCTTGGGATGCACAACATGCCAGT
ATCTACACAGATTGAGAAATTAAAGACTAGAATTGAAATGATTGGAGCAGCCTGTGAAAGTGCTGAAAAAATATTAGCTGAAACTCGGAAAGCATATTGTTTCGGAATGC
GTCAAGGGCCAGCAATAGCTCCAACTTTAGATAAGGCTCAAGCTGCAAAAATTCAGGAGCAAGAGAATTTACTCCGAGCTGCTGTTAACTTCGGGGAAGAGATCCAAATG
GAGAAGACGACAGGGGTTCCAATGGTGGTTCATGACGATAGTGACACGACAATGATTCTAGCGAGTGTTCAGACAGAAACGCGTGATGATCGAAGGACAGTCGATCGCGG
GCTCCAATCAGAAGAAGAGTGCGCCGCTGATGTCCAAATACGTGTGTGTTCGCATAAGCGAGTGAGGAAAGGAGCAAGATTAAGATTACCTGGTGAGCAACGACAAATTA
CGCCAACACTTCCAATGCATTTGATAGATGTGCTGAATGTAGGTGATGGAGTGCAGAGTTTTAATGAAACGTCTGGTATATATACAAAGAATACTCCTCTTACGTCAAAT
AATATTAGTGGTCAAGGAGCATTGATACAGCAGCCTCCTGGATCACAACTTGTTGGAAGATCAGCTGCTTCGCCTTCTGGTGCTACGAGTGCCACATCCTTTGACACCAC
AACGTCACCATTGCCATATGCTAACTCTCCAAGTTATATTTTCTTTTATTATATAACCATGCCAGATTCATGGACAGCATCAGATGCAGTTTTCACAGCCACTGGCACAC
CAGCAATTTCAGGGACGGCAGATGTCTTCTGGACATGTTCAACATGGCATTACTCAAAGCCAACTTGGCCAAGGAAATCAAATGAATCGTCATTTGAGCCAGTTTTCTGG
CGCTGCTAA

mRNA sequence

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Protein sequence

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MATMDGVVQNQPQQQQPLPAQQVVVAERLNQAVQQQLNLEALKTRATTLFKAISRILEDFDVYGRTNTTPKWQDILGQYSMVNLELFNIVDEIKKVSKAFVVHPKNVNAE
NSTILPVMLSSKLLPEMEVDDNSKREQLLLGMHNMPVSTQIEKLKTRIEMIGAACESAEKILAETRKAYCFGMRQGPAIAPTLDKAQAAKIQEQENLLRAAVNFGEEIQM
EKTTGVPMVVHDDSDTTMILASVQTETRDDRRTVDRGLQSEEECAADVQIRVCSHKRVRKGARLRLPGEQRQITPTLPMHLIDVLNVGDGVQSFNETSGIYTKNTPLTSN
NISGQGALIQQPPGSQLVGRSAASPSGATSATSFDTTTSPLPYANSPSYIFFYYITMPDSWTASDAVFTATGTPAISGTADVFWTCSTWHYSKPTWPRKSNESSFEPVFW
RC

HG10002449 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome