; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

HG10002505 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10002505
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionF-box protein SKIP8
Genome locationChr11:7476919..7479282
RNA-Seq ExpressionHG10002505
SyntenyHG10002505
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
GO:0005515 - protein binding (molecular function)
InterPro domainsIPR001810 - F-box domain
IPR032710 - NTF2-like domain superfamily
IPR036047 - F-box-like domain superfamily
IPR037401 - SnoaL-like domain
IPR044260 - F-box protein SKIP8-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0044925.1 F-box protein SKIP8 [Cucumis melo var. makuwa]2.1e-14686.9Show/hide
Query:  MEIVSAATIALSSQPFPIAAIVTFLCFLLALFVAVRLVSVPYIRRTKALQSVGLGTRNCNCTCSLNGGVVIGGLDPRAAITSSTSTSMPYLNGRAVEVLE
        MEIVS+ATIALSSQPFPIAAIVTFLCFLLA+FVAVRLVSVPYIRRTK+LQS  +GTRNCNCTCSLNGGVVI GLDPRA ITSSTSTSMPYLNGRAVEVLE
Subjt:  MEIVSAATIALSSQPFPIAAIVTFLCFLLALFVAVRLVSVPYIRRTKALQSVGLGTRNCNCTCSLNGGVVIGGLDPRAAITSSTSTSMPYLNGRAVEVLE

Query:  KSPVVVTERQTGASMMEQLVPEITTHALSYLDYPSLCRLSMTNSLMRKAANDDNAWKALYHKDFTREQDTVTPINGWKAYYAATRTIMNINAQFYNIIRD
        K+PVVVTERQTGASMMEQLVPEITTHALSYLDYPSLCRLSMTNSLMRKAANDDNAWKALYHKDFT EQDTVTPINGWK+YYAATRTIMNINAQFYNIIRD
Subjt:  KSPVVVTERQTGASMMEQLVPEITTHALSYLDYPSLCRLSMTNSLMRKAANDDNAWKALYHKDFTREQDTVTPINGWKAYYAATRTIMNINAQFYNIIRD

Query:  R---------------------------YNSVIQSWQVAFNWEQGINFQVRDVRARVLTDMAWVSMKTYVDMDTGPFNVTNIYEFHNDRWYMVHHHSSVM
        R                           YN+VIQSWQVAFNWEQGINFQVRDVRARVLTDMAWVSMKTYVDMDTGPFNVTNIYEFH+ RWYMVHHHSSVM
Subjt:  R---------------------------YNSVIQSWQVAFNWEQGINFQVRDVRARVLTDMAWVSMKTYVDMDTGPFNVTNIYEFHNDRWYMVHHHSSVM

Query:  LIVGEMEQQMVHG
        LIVGEMEQQMVHG
Subjt:  LIVGEMEQQMVHG

XP_004149013.1 F-box protein SKIP8 [Cucumis sativus]9.5e-14786.9Show/hide
Query:  MEIVSAATIALSSQPFPIAAIVTFLCFLLALFVAVRLVSVPYIRRTKALQSVGLGTRNCNCTCSLNGGVVIGGLDPRAAITSSTSTSMPYLNGRAVEVLE
        MEIVS+ATIALSSQPFPIAAIVTFLCFLLA+FVAVRLVSVPYIRRTK LQS  +GTRNCNCTCSLNGGVVI GLDPRA ITSSTSTSMPYLNGRAVEVLE
Subjt:  MEIVSAATIALSSQPFPIAAIVTFLCFLLALFVAVRLVSVPYIRRTKALQSVGLGTRNCNCTCSLNGGVVIGGLDPRAAITSSTSTSMPYLNGRAVEVLE

Query:  KSPVVVTERQTGASMMEQLVPEITTHALSYLDYPSLCRLSMTNSLMRKAANDDNAWKALYHKDFTREQDTVTPINGWKAYYAATRTIMNINAQFYNIIRD
        K+PVVVTERQTGASMMEQLVPEITTHALSYLDYPSLCRLSMTNSLMRKAANDDNAWKALYHKDFT EQDTVTPINGWK+YYAATRTIMNINAQFYNIIRD
Subjt:  KSPVVVTERQTGASMMEQLVPEITTHALSYLDYPSLCRLSMTNSLMRKAANDDNAWKALYHKDFTREQDTVTPINGWKAYYAATRTIMNINAQFYNIIRD

Query:  R---------------------------YNSVIQSWQVAFNWEQGINFQVRDVRARVLTDMAWVSMKTYVDMDTGPFNVTNIYEFHNDRWYMVHHHSSVM
        R                           YN+V+QSWQVAFNWEQGINFQVRDVRARVLTDMAWVSMKTYVDMDTGPFNVTNIYEFHN RWYMVHHHSSVM
Subjt:  R---------------------------YNSVIQSWQVAFNWEQGINFQVRDVRARVLTDMAWVSMKTYVDMDTGPFNVTNIYEFHNDRWYMVHHHSSVM

Query:  LIVGEMEQQMVHG
        LIVGEMEQQMVHG
Subjt:  LIVGEMEQQMVHG

XP_008451931.1 PREDICTED: F-box protein SKIP8 [Cucumis melo]2.8e-14686.58Show/hide
Query:  MEIVSAATIALSSQPFPIAAIVTFLCFLLALFVAVRLVSVPYIRRTKALQSVGLGTRNCNCTCSLNGGVVIGGLDPRAAITSSTSTSMPYLNGRAVEVLE
        MEIVS+ATIALSSQPFPIAAI+TFLCFLLA+FVAVRLVSVPYIRRTK+LQS  +GTRNCNCTCSLNGGVVI GLDPRA ITSSTSTSMPYLNGRAVEVLE
Subjt:  MEIVSAATIALSSQPFPIAAIVTFLCFLLALFVAVRLVSVPYIRRTKALQSVGLGTRNCNCTCSLNGGVVIGGLDPRAAITSSTSTSMPYLNGRAVEVLE

Query:  KSPVVVTERQTGASMMEQLVPEITTHALSYLDYPSLCRLSMTNSLMRKAANDDNAWKALYHKDFTREQDTVTPINGWKAYYAATRTIMNINAQFYNIIRD
        K+PVVVTERQTGASMMEQLVPEITTHALSYLDYPSLCRLSMTNSLMRKAANDDNAWKALYHKDFT EQDTVTPINGWK+YYAATRTIMNINAQFYNIIRD
Subjt:  KSPVVVTERQTGASMMEQLVPEITTHALSYLDYPSLCRLSMTNSLMRKAANDDNAWKALYHKDFTREQDTVTPINGWKAYYAATRTIMNINAQFYNIIRD

Query:  R---------------------------YNSVIQSWQVAFNWEQGINFQVRDVRARVLTDMAWVSMKTYVDMDTGPFNVTNIYEFHNDRWYMVHHHSSVM
        R                           YN+VIQSWQVAFNWEQGINFQVRDVRARVLTDMAWVSMKTYVDMDTGPFNVTNIYEFH+ RWYMVHHHSSVM
Subjt:  R---------------------------YNSVIQSWQVAFNWEQGINFQVRDVRARVLTDMAWVSMKTYVDMDTGPFNVTNIYEFHNDRWYMVHHHSSVM

Query:  LIVGEMEQQMVHG
        LIVGEMEQQMVHG
Subjt:  LIVGEMEQQMVHG

XP_022931549.1 F-box protein SKIP8-like [Cucurbita moschata]7.6e-14485.94Show/hide
Query:  MEIVSAATIALSSQPFPIAAIVTFLCFLLALFVAVRLVSVPYIRRTKALQSVGLGTRNCNCTCSLNGGVVIGGLDPRAAITSSTSTSMPYLNGRAVEVLE
        MEI SAATIAL SQPFPIAAIVTFLCFLLALF AVRLVSVPYIRRTK +Q  G+GTRN NCTCSLNGGV IGGL+PRA ITSSTSTSMPYLNGRAVEVLE
Subjt:  MEIVSAATIALSSQPFPIAAIVTFLCFLLALFVAVRLVSVPYIRRTKALQSVGLGTRNCNCTCSLNGGVVIGGLDPRAAITSSTSTSMPYLNGRAVEVLE

Query:  KSPVVVTERQTGASMMEQLVPEITTHALSYLDYPSLCRLSMTNSLMRKAANDDNAWKALYHKDFTREQDTVTPINGWKAYYAATRTIMNINAQFYNIIRD
        K+PVVVTERQTGASMMEQLVPEITTHALSYLDYPSLCRLSMTNSLMRKAANDD+AWKALYHKDFT EQDTVTPINGWKAYYAATRTIMNINAQFYNIIRD
Subjt:  KSPVVVTERQTGASMMEQLVPEITTHALSYLDYPSLCRLSMTNSLMRKAANDDNAWKALYHKDFTREQDTVTPINGWKAYYAATRTIMNINAQFYNIIRD

Query:  R---------------------------YNSVIQSWQVAFNWEQGINFQVRDVRARVLTDMAWVSMKTYVDMDTGPFNVTNIYEFHNDRWYMVHHHSSVM
        R                           YN+VIQSWQVAFNWEQGINFQVRDVRARVLTDMAWVSMKTYVDMDTGPFNVTNIYEFHN RWYMVHHHSSVM
Subjt:  R---------------------------YNSVIQSWQVAFNWEQGINFQVRDVRARVLTDMAWVSMKTYVDMDTGPFNVTNIYEFHNDRWYMVHHHSSVM

Query:  LIVGEMEQQMVHG
        LIVGEMEQQMVHG
Subjt:  LIVGEMEQQMVHG

XP_038880969.1 F-box protein SKIP8-like [Benincasa hispida]6.0e-14988.18Show/hide
Query:  MEIVSAATIALSSQPFPIAAIVTFLCFLLALFVAVRLVSVPYIRRTKALQSVGLGTRNCNCTCSLNGGVVIGGLDPRAAITSSTSTSMPYLNGRAVEVLE
        MEI+S+ATIALSSQPFPIAAIVTFLCFLLALF AVRLVSVPYIRRTKALQSV LGTRNCNCTCSLNGGVVIGGLDPRA ITSSTSTSMPYLNGRAVEVLE
Subjt:  MEIVSAATIALSSQPFPIAAIVTFLCFLLALFVAVRLVSVPYIRRTKALQSVGLGTRNCNCTCSLNGGVVIGGLDPRAAITSSTSTSMPYLNGRAVEVLE

Query:  KSPVVVTERQTGASMMEQLVPEITTHALSYLDYPSLCRLSMTNSLMRKAANDDNAWKALYHKDFTREQDTVTPINGWKAYYAATRTIMNINAQFYNIIRD
        K+PVVVTERQTGASMMEQLVPEITTHALSYLDYPSLCRLSMTNSLMRKAANDDNAWKALYHKDFT EQDTVTPINGWKAYYAATRTIMNINAQFYNIIRD
Subjt:  KSPVVVTERQTGASMMEQLVPEITTHALSYLDYPSLCRLSMTNSLMRKAANDDNAWKALYHKDFTREQDTVTPINGWKAYYAATRTIMNINAQFYNIIRD

Query:  R---------------------------YNSVIQSWQVAFNWEQGINFQVRDVRARVLTDMAWVSMKTYVDMDTGPFNVTNIYEFHNDRWYMVHHHSSVM
        R                           YN+VIQSWQ+AFNWEQGINFQVRDVRARVLTDMAWVSMKTYVDMDTGPFNVTNIYEFHN RWYMVHHHSSVM
Subjt:  R---------------------------YNSVIQSWQVAFNWEQGINFQVRDVRARVLTDMAWVSMKTYVDMDTGPFNVTNIYEFHNDRWYMVHHHSSVM

Query:  LIVGEMEQQMVHG
        LIVGEMEQQMVHG
Subjt:  LIVGEMEQQMVHG

TrEMBL top hitse value%identityAlignment
A0A0A0KX34 F-box domain-containing protein4.6e-14786.9Show/hide
Query:  MEIVSAATIALSSQPFPIAAIVTFLCFLLALFVAVRLVSVPYIRRTKALQSVGLGTRNCNCTCSLNGGVVIGGLDPRAAITSSTSTSMPYLNGRAVEVLE
        MEIVS+ATIALSSQPFPIAAIVTFLCFLLA+FVAVRLVSVPYIRRTK LQS  +GTRNCNCTCSLNGGVVI GLDPRA ITSSTSTSMPYLNGRAVEVLE
Subjt:  MEIVSAATIALSSQPFPIAAIVTFLCFLLALFVAVRLVSVPYIRRTKALQSVGLGTRNCNCTCSLNGGVVIGGLDPRAAITSSTSTSMPYLNGRAVEVLE

Query:  KSPVVVTERQTGASMMEQLVPEITTHALSYLDYPSLCRLSMTNSLMRKAANDDNAWKALYHKDFTREQDTVTPINGWKAYYAATRTIMNINAQFYNIIRD
        K+PVVVTERQTGASMMEQLVPEITTHALSYLDYPSLCRLSMTNSLMRKAANDDNAWKALYHKDFT EQDTVTPINGWK+YYAATRTIMNINAQFYNIIRD
Subjt:  KSPVVVTERQTGASMMEQLVPEITTHALSYLDYPSLCRLSMTNSLMRKAANDDNAWKALYHKDFTREQDTVTPINGWKAYYAATRTIMNINAQFYNIIRD

Query:  R---------------------------YNSVIQSWQVAFNWEQGINFQVRDVRARVLTDMAWVSMKTYVDMDTGPFNVTNIYEFHNDRWYMVHHHSSVM
        R                           YN+V+QSWQVAFNWEQGINFQVRDVRARVLTDMAWVSMKTYVDMDTGPFNVTNIYEFHN RWYMVHHHSSVM
Subjt:  R---------------------------YNSVIQSWQVAFNWEQGINFQVRDVRARVLTDMAWVSMKTYVDMDTGPFNVTNIYEFHNDRWYMVHHHSSVM

Query:  LIVGEMEQQMVHG
        LIVGEMEQQMVHG
Subjt:  LIVGEMEQQMVHG

A0A1S3BTF9 F-box protein SKIP81.3e-14686.58Show/hide
Query:  MEIVSAATIALSSQPFPIAAIVTFLCFLLALFVAVRLVSVPYIRRTKALQSVGLGTRNCNCTCSLNGGVVIGGLDPRAAITSSTSTSMPYLNGRAVEVLE
        MEIVS+ATIALSSQPFPIAAI+TFLCFLLA+FVAVRLVSVPYIRRTK+LQS  +GTRNCNCTCSLNGGVVI GLDPRA ITSSTSTSMPYLNGRAVEVLE
Subjt:  MEIVSAATIALSSQPFPIAAIVTFLCFLLALFVAVRLVSVPYIRRTKALQSVGLGTRNCNCTCSLNGGVVIGGLDPRAAITSSTSTSMPYLNGRAVEVLE

Query:  KSPVVVTERQTGASMMEQLVPEITTHALSYLDYPSLCRLSMTNSLMRKAANDDNAWKALYHKDFTREQDTVTPINGWKAYYAATRTIMNINAQFYNIIRD
        K+PVVVTERQTGASMMEQLVPEITTHALSYLDYPSLCRLSMTNSLMRKAANDDNAWKALYHKDFT EQDTVTPINGWK+YYAATRTIMNINAQFYNIIRD
Subjt:  KSPVVVTERQTGASMMEQLVPEITTHALSYLDYPSLCRLSMTNSLMRKAANDDNAWKALYHKDFTREQDTVTPINGWKAYYAATRTIMNINAQFYNIIRD

Query:  R---------------------------YNSVIQSWQVAFNWEQGINFQVRDVRARVLTDMAWVSMKTYVDMDTGPFNVTNIYEFHNDRWYMVHHHSSVM
        R                           YN+VIQSWQVAFNWEQGINFQVRDVRARVLTDMAWVSMKTYVDMDTGPFNVTNIYEFH+ RWYMVHHHSSVM
Subjt:  R---------------------------YNSVIQSWQVAFNWEQGINFQVRDVRARVLTDMAWVSMKTYVDMDTGPFNVTNIYEFHNDRWYMVHHHSSVM

Query:  LIVGEMEQQMVHG
        LIVGEMEQQMVHG
Subjt:  LIVGEMEQQMVHG

A0A5A7TU63 F-box protein SKIP81.0e-14686.9Show/hide
Query:  MEIVSAATIALSSQPFPIAAIVTFLCFLLALFVAVRLVSVPYIRRTKALQSVGLGTRNCNCTCSLNGGVVIGGLDPRAAITSSTSTSMPYLNGRAVEVLE
        MEIVS+ATIALSSQPFPIAAIVTFLCFLLA+FVAVRLVSVPYIRRTK+LQS  +GTRNCNCTCSLNGGVVI GLDPRA ITSSTSTSMPYLNGRAVEVLE
Subjt:  MEIVSAATIALSSQPFPIAAIVTFLCFLLALFVAVRLVSVPYIRRTKALQSVGLGTRNCNCTCSLNGGVVIGGLDPRAAITSSTSTSMPYLNGRAVEVLE

Query:  KSPVVVTERQTGASMMEQLVPEITTHALSYLDYPSLCRLSMTNSLMRKAANDDNAWKALYHKDFTREQDTVTPINGWKAYYAATRTIMNINAQFYNIIRD
        K+PVVVTERQTGASMMEQLVPEITTHALSYLDYPSLCRLSMTNSLMRKAANDDNAWKALYHKDFT EQDTVTPINGWK+YYAATRTIMNINAQFYNIIRD
Subjt:  KSPVVVTERQTGASMMEQLVPEITTHALSYLDYPSLCRLSMTNSLMRKAANDDNAWKALYHKDFTREQDTVTPINGWKAYYAATRTIMNINAQFYNIIRD

Query:  R---------------------------YNSVIQSWQVAFNWEQGINFQVRDVRARVLTDMAWVSMKTYVDMDTGPFNVTNIYEFHNDRWYMVHHHSSVM
        R                           YN+VIQSWQVAFNWEQGINFQVRDVRARVLTDMAWVSMKTYVDMDTGPFNVTNIYEFH+ RWYMVHHHSSVM
Subjt:  R---------------------------YNSVIQSWQVAFNWEQGINFQVRDVRARVLTDMAWVSMKTYVDMDTGPFNVTNIYEFHNDRWYMVHHHSSVM

Query:  LIVGEMEQQMVHG
        LIVGEMEQQMVHG
Subjt:  LIVGEMEQQMVHG

A0A6J1EUJ3 F-box protein SKIP8-like3.7e-14485.94Show/hide
Query:  MEIVSAATIALSSQPFPIAAIVTFLCFLLALFVAVRLVSVPYIRRTKALQSVGLGTRNCNCTCSLNGGVVIGGLDPRAAITSSTSTSMPYLNGRAVEVLE
        MEI SAATIAL SQPFPIAAIVTFLCFLLALF AVRLVSVPYIRRTK +Q  G+GTRN NCTCSLNGGV IGGL+PRA ITSSTSTSMPYLNGRAVEVLE
Subjt:  MEIVSAATIALSSQPFPIAAIVTFLCFLLALFVAVRLVSVPYIRRTKALQSVGLGTRNCNCTCSLNGGVVIGGLDPRAAITSSTSTSMPYLNGRAVEVLE

Query:  KSPVVVTERQTGASMMEQLVPEITTHALSYLDYPSLCRLSMTNSLMRKAANDDNAWKALYHKDFTREQDTVTPINGWKAYYAATRTIMNINAQFYNIIRD
        K+PVVVTERQTGASMMEQLVPEITTHALSYLDYPSLCRLSMTNSLMRKAANDD+AWKALYHKDFT EQDTVTPINGWKAYYAATRTIMNINAQFYNIIRD
Subjt:  KSPVVVTERQTGASMMEQLVPEITTHALSYLDYPSLCRLSMTNSLMRKAANDDNAWKALYHKDFTREQDTVTPINGWKAYYAATRTIMNINAQFYNIIRD

Query:  R---------------------------YNSVIQSWQVAFNWEQGINFQVRDVRARVLTDMAWVSMKTYVDMDTGPFNVTNIYEFHNDRWYMVHHHSSVM
        R                           YN+VIQSWQVAFNWEQGINFQVRDVRARVLTDMAWVSMKTYVDMDTGPFNVTNIYEFHN RWYMVHHHSSVM
Subjt:  R---------------------------YNSVIQSWQVAFNWEQGINFQVRDVRARVLTDMAWVSMKTYVDMDTGPFNVTNIYEFHNDRWYMVHHHSSVM

Query:  LIVGEMEQQMVHG
        LIVGEMEQQMVHG
Subjt:  LIVGEMEQQMVHG

A0A6J1JB95 F-box protein SKIP86.9e-14385.3Show/hide
Query:  MEIVSAATIALSSQPFPIAAIVTFLCFLLALFVAVRLVSVPYIRRTKALQSVGLGTRNCNCTCSLNGGVVIGGLDPRAAITSSTSTSMPYLNGRAVEVLE
        MEI SAATIAL SQPFPIAAIVTFLCFLLALF AVRLVSVPYIRRT  +Q  G+GTRN NCTCSLNGGV IGGL+PRA ITSSTSTSMPYLNG AVEVLE
Subjt:  MEIVSAATIALSSQPFPIAAIVTFLCFLLALFVAVRLVSVPYIRRTKALQSVGLGTRNCNCTCSLNGGVVIGGLDPRAAITSSTSTSMPYLNGRAVEVLE

Query:  KSPVVVTERQTGASMMEQLVPEITTHALSYLDYPSLCRLSMTNSLMRKAANDDNAWKALYHKDFTREQDTVTPINGWKAYYAATRTIMNINAQFYNIIRD
        K+PVVVTERQTGASMMEQLVPEITTHALSYLDYPSLCRLSMTNSLMRKAANDD+AWKALYHKDFT EQDTVTPINGWKAYYAATRTIMNINAQFYNIIRD
Subjt:  KSPVVVTERQTGASMMEQLVPEITTHALSYLDYPSLCRLSMTNSLMRKAANDDNAWKALYHKDFTREQDTVTPINGWKAYYAATRTIMNINAQFYNIIRD

Query:  R---------------------------YNSVIQSWQVAFNWEQGINFQVRDVRARVLTDMAWVSMKTYVDMDTGPFNVTNIYEFHNDRWYMVHHHSSVM
        R                           YN+VIQSWQVAFNWEQGINFQVRDVRARVLTDMAWVSMKTYVDMDTGPFNVTNIYEFHN RWYMVHHHSSVM
Subjt:  R---------------------------YNSVIQSWQVAFNWEQGINFQVRDVRARVLTDMAWVSMKTYVDMDTGPFNVTNIYEFHNDRWYMVHHHSSVM

Query:  LIVGEMEQQMVHG
        LIVGEMEQQMVHG
Subjt:  LIVGEMEQQMVHG

SwissProt top hitse value%identityAlignment
Q93YV9 F-box protein SKIP83.6e-7256.68Show/hide
Query:  NGGVVIGGLDPRAAITSSTSTSMPYLNGRAVEVLEKSPVVVTERQTGASMMEQLVPEITTHALSYLDYPSLCRLSMTNSLMRKAANDDNAWKALYHKDFT
        NGG    G   R  +T+ST                     V + + G SMMEQLVPEITTHALSYLDYPSLCRLSMTNSLMRKAANDDNAWKALYHKDFT
Subjt:  NGGVVIGGLDPRAAITSSTSTSMPYLNGRAVEVLEKSPVVVTERQTGASMMEQLVPEITTHALSYLDYPSLCRLSMTNSLMRKAANDDNAWKALYHKDFT

Query:  REQDTVTPINGWKAYYAATRTIMNINAQFYNIIRDR---------------------------YNSVIQSWQVAFNWEQGINFQVRDVRARVLTDMAWVS
         EQD +TP+NGWK YYA TR I+++N +F+ IIRDR                           YN VIQSWQ+ FNWEQG +FQV  VR R+LTDMAWV+
Subjt:  REQDTVTPINGWKAYYAATRTIMNINAQFYNIIRDR---------------------------YNSVIQSWQVAFNWEQGINFQVRDVRARVLTDMAWVS

Query:  MKTYVDMDTGPFNVTNIYEFHNDRWYMVHHHSSVMLIVGEMEQQMVH
        MK Y+++D GPF +TN++EFHN RW+MVHHHSSVMLI  + +Q +VH
Subjt:  MKTYVDMDTGPFNVTNIYEFHNDRWYMVHHHSSVMLIVGEMEQQMVH

Q9T0B0 Probable F-box protein At4g239608.1e-2456.32Show/hide
Query:  MMEQLVPEITTHALSYLDYPSLCRLSMTNSLMRKAANDDNAWKALYHKDFTREQDTVTPINGWKAYYAATRTIMNINAQFYNIIRDR
        M+EQL PE+T +AL YLDY SLC+LSMT+S MRK ANDD  W+ALY ++FT E +  TP+NGWKA++A T+ +M +N +F++I+  R
Subjt:  MMEQLVPEITTHALSYLDYPSLCRLSMTNSLMRKAANDDNAWKALYHKDFTREQDTVTPINGWKAYYAATRTIMNINAQFYNIIRDR

Arabidopsis top hitse value%identityAlignment
AT4G10925.1 Nuclear transport factor 2 (NTF2) family protein2.6e-7356.68Show/hide
Query:  NGGVVIGGLDPRAAITSSTSTSMPYLNGRAVEVLEKSPVVVTERQTGASMMEQLVPEITTHALSYLDYPSLCRLSMTNSLMRKAANDDNAWKALYHKDFT
        NGG    G   R  +T+ST                     V + + G SMMEQLVPEITTHALSYLDYPSLCRLSMTNSLMRKAANDDNAWKALYHKDFT
Subjt:  NGGVVIGGLDPRAAITSSTSTSMPYLNGRAVEVLEKSPVVVTERQTGASMMEQLVPEITTHALSYLDYPSLCRLSMTNSLMRKAANDDNAWKALYHKDFT

Query:  REQDTVTPINGWKAYYAATRTIMNINAQFYNIIRDR---------------------------YNSVIQSWQVAFNWEQGINFQVRDVRARVLTDMAWVS
         EQD +TP+NGWK YYA TR I+++N +F+ IIRDR                           YN VIQSWQ+ FNWEQG +FQV  VR R+LTDMAWV+
Subjt:  REQDTVTPINGWKAYYAATRTIMNINAQFYNIIRDR---------------------------YNSVIQSWQVAFNWEQGINFQVRDVRARVLTDMAWVS

Query:  MKTYVDMDTGPFNVTNIYEFHNDRWYMVHHHSSVMLIVGEMEQQMVH
        MK Y+++D GPF +TN++EFHN RW+MVHHHSSVMLI  + +Q +VH
Subjt:  MKTYVDMDTGPFNVTNIYEFHNDRWYMVHHHSSVMLIVGEMEQQMVH

AT4G10925.2 Nuclear transport factor 2 (NTF2) family protein2.6e-7356.68Show/hide
Query:  NGGVVIGGLDPRAAITSSTSTSMPYLNGRAVEVLEKSPVVVTERQTGASMMEQLVPEITTHALSYLDYPSLCRLSMTNSLMRKAANDDNAWKALYHKDFT
        NGG    G   R  +T+ST                     V + + G SMMEQLVPEITTHALSYLDYPSLCRLSMTNSLMRKAANDDNAWKALYHKDFT
Subjt:  NGGVVIGGLDPRAAITSSTSTSMPYLNGRAVEVLEKSPVVVTERQTGASMMEQLVPEITTHALSYLDYPSLCRLSMTNSLMRKAANDDNAWKALYHKDFT

Query:  REQDTVTPINGWKAYYAATRTIMNINAQFYNIIRDR---------------------------YNSVIQSWQVAFNWEQGINFQVRDVRARVLTDMAWVS
         EQD +TP+NGWK YYA TR I+++N +F+ IIRDR                           YN VIQSWQ+ FNWEQG +FQV  VR R+LTDMAWV+
Subjt:  REQDTVTPINGWKAYYAATRTIMNINAQFYNIIRDR---------------------------YNSVIQSWQVAFNWEQGINFQVRDVRARVLTDMAWVS

Query:  MKTYVDMDTGPFNVTNIYEFHNDRWYMVHHHSSVMLIVGEMEQQMVH
        MK Y+++D GPF +TN++EFHN RW+MVHHHSSVMLI  + +Q +VH
Subjt:  MKTYVDMDTGPFNVTNIYEFHNDRWYMVHHHSSVMLIVGEMEQQMVH

AT4G10925.3 Nuclear transport factor 2 (NTF2) family protein2.6e-7356.68Show/hide
Query:  NGGVVIGGLDPRAAITSSTSTSMPYLNGRAVEVLEKSPVVVTERQTGASMMEQLVPEITTHALSYLDYPSLCRLSMTNSLMRKAANDDNAWKALYHKDFT
        NGG    G   R  +T+ST                     V + + G SMMEQLVPEITTHALSYLDYPSLCRLSMTNSLMRKAANDDNAWKALYHKDFT
Subjt:  NGGVVIGGLDPRAAITSSTSTSMPYLNGRAVEVLEKSPVVVTERQTGASMMEQLVPEITTHALSYLDYPSLCRLSMTNSLMRKAANDDNAWKALYHKDFT

Query:  REQDTVTPINGWKAYYAATRTIMNINAQFYNIIRDR---------------------------YNSVIQSWQVAFNWEQGINFQVRDVRARVLTDMAWVS
         EQD +TP+NGWK YYA TR I+++N +F+ IIRDR                           YN VIQSWQ+ FNWEQG +FQV  VR R+LTDMAWV+
Subjt:  REQDTVTPINGWKAYYAATRTIMNINAQFYNIIRDR---------------------------YNSVIQSWQVAFNWEQGINFQVRDVRARVLTDMAWVS

Query:  MKTYVDMDTGPFNVTNIYEFHNDRWYMVHHHSSVMLIVGEMEQQMVH
        MK Y+++D GPF +TN++EFHN RW+MVHHHSSVMLI  + +Q +VH
Subjt:  MKTYVDMDTGPFNVTNIYEFHNDRWYMVHHHSSVMLIVGEMEQQMVH

AT4G23960.1 F-box family protein5.8e-2556.32Show/hide
Query:  MMEQLVPEITTHALSYLDYPSLCRLSMTNSLMRKAANDDNAWKALYHKDFTREQDTVTPINGWKAYYAATRTIMNINAQFYNIIRDR
        M+EQL PE+T +AL YLDY SLC+LSMT+S MRK ANDD  W+ALY ++FT E +  TP+NGWKA++A T+ +M +N +F++I+  R
Subjt:  MMEQLVPEITTHALSYLDYPSLCRLSMTNSLMRKAANDDNAWKALYHKDFTREQDTVTPINGWKAYYAATRTIMNINAQFYNIIRDR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGATTGTCTCTGCTGCCACCATTGCCTTGTCGTCCCAACCCTTCCCTATAGCTGCGATTGTTACTTTCCTTTGTTTTCTTCTCGCTCTTTTCGTCGCCGTTCGATT
GGTTTCTGTTCCTTACATTAGAAGGACGAAAGCGCTACAATCGGTGGGCCTGGGTACAAGGAATTGTAATTGTACCTGTTCGCTTAACGGTGGTGTGGTTATTGGGGGTT
TGGACCCCAGGGCTGCGATTACTTCTTCGACTAGTACGAGTATGCCTTATTTGAACGGTCGTGCCGTGGAAGTATTGGAGAAGTCGCCGGTGGTTGTGACGGAGCGGCAG
ACGGGCGCTTCGATGATGGAGCAGTTGGTGCCGGAGATTACTACGCACGCTCTTAGTTACTTGGATTATCCCAGCCTATGCCGTTTGTCCATGACTAATTCGTTGATGCG
CAAAGCCGCGAATGATGATAATGCCTGGAAAGCGCTTTATCATAAGGACTTCACACGGGAACAGGATACTGTAACTCCAATTAACGGGTGGAAGGCTTACTATGCTGCAA
CAAGAACAATTATGAATATTAATGCCCAATTCTATAACATCATCAGAGACAGGTATAATTCCGTAATTCAAAGTTGGCAGGTTGCATTTAACTGGGAACAAGGGATTAAT
TTTCAGGTCCGTGACGTACGGGCTCGTGTGCTTACAGATATGGCTTGGGTTAGCATGAAAACGTATGTTGACATGGATACAGGGCCATTCAATGTGACCAACATTTACGA
GTTTCATAATGATCGATGGTACATGGTGCATCATCACAGCTCTGTGATGCTTATTGTTGGGGAGATGGAACAACAAATGGTTCATGGGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGAGATTGTCTCTGCTGCCACCATTGCCTTGTCGTCCCAACCCTTCCCTATAGCTGCGATTGTTACTTTCCTTTGTTTTCTTCTCGCTCTTTTCGTCGCCGTTCGATT
GGTTTCTGTTCCTTACATTAGAAGGACGAAAGCGCTACAATCGGTGGGCCTGGGTACAAGGAATTGTAATTGTACCTGTTCGCTTAACGGTGGTGTGGTTATTGGGGGTT
TGGACCCCAGGGCTGCGATTACTTCTTCGACTAGTACGAGTATGCCTTATTTGAACGGTCGTGCCGTGGAAGTATTGGAGAAGTCGCCGGTGGTTGTGACGGAGCGGCAG
ACGGGCGCTTCGATGATGGAGCAGTTGGTGCCGGAGATTACTACGCACGCTCTTAGTTACTTGGATTATCCCAGCCTATGCCGTTTGTCCATGACTAATTCGTTGATGCG
CAAAGCCGCGAATGATGATAATGCCTGGAAAGCGCTTTATCATAAGGACTTCACACGGGAACAGGATACTGTAACTCCAATTAACGGGTGGAAGGCTTACTATGCTGCAA
CAAGAACAATTATGAATATTAATGCCCAATTCTATAACATCATCAGAGACAGGTATAATTCCGTAATTCAAAGTTGGCAGGTTGCATTTAACTGGGAACAAGGGATTAAT
TTTCAGGTCCGTGACGTACGGGCTCGTGTGCTTACAGATATGGCTTGGGTTAGCATGAAAACGTATGTTGACATGGATACAGGGCCATTCAATGTGACCAACATTTACGA
GTTTCATAATGATCGATGGTACATGGTGCATCATCACAGCTCTGTGATGCTTATTGTTGGGGAGATGGAACAACAAATGGTTCATGGGTAA
Protein sequenceShow/hide protein sequence
MEIVSAATIALSSQPFPIAAIVTFLCFLLALFVAVRLVSVPYIRRTKALQSVGLGTRNCNCTCSLNGGVVIGGLDPRAAITSSTSTSMPYLNGRAVEVLEKSPVVVTERQ
TGASMMEQLVPEITTHALSYLDYPSLCRLSMTNSLMRKAANDDNAWKALYHKDFTREQDTVTPINGWKAYYAATRTIMNINAQFYNIIRDRYNSVIQSWQVAFNWEQGIN
FQVRDVRARVLTDMAWVSMKTYVDMDTGPFNVTNIYEFHNDRWYMVHHHSSVMLIVGEMEQQMVHG