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HG10002539 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10002539
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionTransposase
Genome locationChr11:7988780..7989385
RNA-Seq ExpressionHG10002539
SyntenyHG10002539
Gene Ontology termsGO:0006508 - proteolysis (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0008234 - cysteine-type peptidase activity (molecular function)
InterPro domainsIPR003653 - Ulp1 protease family, C-terminal catalytic domain
IPR038765 - Papain-like cysteine peptidase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8649224.1 hypothetical protein Csa_014966 [Cucumis sativus]8.3e-5979.43Show/hide
Query:  SMQVEDTIQIKLSEHIFGKEKTIYLRRDDIMQYCGMAEIGYSCILAYIACLWNACDCEVRKKFMIVDQATISSHVKSQEHRSKNLINRLEMVSLDQLVLI
        +MQV+D IQI L+EHIFGKEKTIYLR DDI+QYCGM EIGYSCIL YIACLWNACD E+ K+F++VDQATISSH+KSQE+RS+NLI+RLEM +LDQLVLI
Subjt:  SMQVEDTIQIKLSEHIFGKEKTIYLRRDDIMQYCGMAEIGYSCILAYIACLWNACDCEVRKKFMIVDQATISSHVKSQEHRSKNLINRLEMVSLDQLVLI

Query:  PYNTG-CHWILIIINLQENCVYVMDSLRSKILEDFQGVINK
        PYNTG CHWILI+I+L+ENCVYVMD LR+KIL +FQGVINK
Subjt:  PYNTG-CHWILIIINLQENCVYVMDSLRSKILEDFQGVINK

XP_008451868.1 PREDICTED: uncharacterized protein LOC103493028 isoform X1 [Cucumis melo]3.0e-6182.52Show/hide
Query:  MLSMQVEDTIQIKLSEHIFGKEKTIYLRRDDIMQYCGMAEIGYSCILAYIACLWNACDCEVRKKFMIVDQATISSHVKSQEHRSKNLINRLEMVSLDQLV
        M +MQVED IQI LSEHIFGKEKTIYLRRDDI+QYCGM EIGYSCIL YIACLWN C+ E+ K+F++VDQATISSH+KSQE+RS+NLINRLEM +LDQLV
Subjt:  MLSMQVEDTIQIKLSEHIFGKEKTIYLRRDDIMQYCGMAEIGYSCILAYIACLWNACDCEVRKKFMIVDQATISSHVKSQEHRSKNLINRLEMVSLDQLV

Query:  LIPYNTG-CHWILIIINLQENCVYVMDSLRSKILEDFQGVINK
        LIPYNTG CHWILIII+LQENCVYVMD LRSKIL +FQGVINK
Subjt:  LIPYNTG-CHWILIIINLQENCVYVMDSLRSKILEDFQGVINK

XP_031740251.1 uncharacterized protein LOC101213947 [Cucumis sativus]8.3e-5979.43Show/hide
Query:  SMQVEDTIQIKLSEHIFGKEKTIYLRRDDIMQYCGMAEIGYSCILAYIACLWNACDCEVRKKFMIVDQATISSHVKSQEHRSKNLINRLEMVSLDQLVLI
        +MQV+D IQI L+EHIFGKEKTIYLR DDI+QYCGM EIGYSCIL YIACLWNACD E+ K+F++VDQATISSH+KSQE+RS+NLI+RLEM +LDQLVLI
Subjt:  SMQVEDTIQIKLSEHIFGKEKTIYLRRDDIMQYCGMAEIGYSCILAYIACLWNACDCEVRKKFMIVDQATISSHVKSQEHRSKNLINRLEMVSLDQLVLI

Query:  PYNTG-CHWILIIINLQENCVYVMDSLRSKILEDFQGVINK
        PYNTG CHWILI+I+L+ENCVYVMD LR+KIL +FQGVINK
Subjt:  PYNTG-CHWILIIINLQENCVYVMDSLRSKILEDFQGVINK

XP_038895921.1 uncharacterized protein LOC120084092 isoform X1 [Benincasa hispida]5.6e-6388.73Show/hide
Query:  MLSMQVEDTIQIKLSEHIFGKEKTIYLRRDDIMQYCGMAEIGYSCILAYIACLWNACDCEVRKKFMIVDQATISSHVKSQEHRSKNLINRLEMVSLDQLV
        M SMQV+D IQI LSE I GKEKTIYL+RDDI+QYCGMAEIGYSCILAYIACLWNACD E+ KKF+IVDQATISSHVK QE RSKNLINRLEMVSLDQLV
Subjt:  MLSMQVEDTIQIKLSEHIFGKEKTIYLRRDDIMQYCGMAEIGYSCILAYIACLWNACDCEVRKKFMIVDQATISSHVKSQEHRSKNLINRLEMVSLDQLV

Query:  LIPYNTG-CHWILIIINLQENCVYVMDSLRSKILEDFQGVIN
        LIPYNTG CHWILIIINLQENCVYVMDSLRSKILE+FQGVIN
Subjt:  LIPYNTG-CHWILIIINLQENCVYVMDSLRSKILEDFQGVIN

XP_038895930.1 uncharacterized protein LOC120084092 isoform X2 [Benincasa hispida]2.3e-6489.36Show/hide
Query:  MLSMQVEDTIQIKLSEHIFGKEKTIYLRRDDIMQYCGMAEIGYSCILAYIACLWNACDCEVRKKFMIVDQATISSHVKSQEHRSKNLINRLEMVSLDQLV
        M SMQV+D IQI LSE I GKEKTIYL+RDDI+QYCGMAEIGYSCILAYIACLWNACD E+ KKF+IVDQATISSHVK QE RSKNLINRLEMVSLDQLV
Subjt:  MLSMQVEDTIQIKLSEHIFGKEKTIYLRRDDIMQYCGMAEIGYSCILAYIACLWNACDCEVRKKFMIVDQATISSHVKSQEHRSKNLINRLEMVSLDQLV

Query:  LIPYNTGCHWILIIINLQENCVYVMDSLRSKILEDFQGVIN
        LIPYNTGCHWILIIINLQENCVYVMDSLRSKILE+FQGVIN
Subjt:  LIPYNTGCHWILIIINLQENCVYVMDSLRSKILEDFQGVIN

TrEMBL top hitse value%identityAlignment
A0A1S3BRX5 uncharacterized protein LOC103493028 isoform X11.5e-6182.52Show/hide
Query:  MLSMQVEDTIQIKLSEHIFGKEKTIYLRRDDIMQYCGMAEIGYSCILAYIACLWNACDCEVRKKFMIVDQATISSHVKSQEHRSKNLINRLEMVSLDQLV
        M +MQVED IQI LSEHIFGKEKTIYLRRDDI+QYCGM EIGYSCIL YIACLWN C+ E+ K+F++VDQATISSH+KSQE+RS+NLINRLEM +LDQLV
Subjt:  MLSMQVEDTIQIKLSEHIFGKEKTIYLRRDDIMQYCGMAEIGYSCILAYIACLWNACDCEVRKKFMIVDQATISSHVKSQEHRSKNLINRLEMVSLDQLV

Query:  LIPYNTG-CHWILIIINLQENCVYVMDSLRSKILEDFQGVINK
        LIPYNTG CHWILIII+LQENCVYVMD LRSKIL +FQGVINK
Subjt:  LIPYNTG-CHWILIIINLQENCVYVMDSLRSKILEDFQGVINK

A0A5D3CYL9 ULP_PROTEASE domain-containing protein1.5e-6182.52Show/hide
Query:  MLSMQVEDTIQIKLSEHIFGKEKTIYLRRDDIMQYCGMAEIGYSCILAYIACLWNACDCEVRKKFMIVDQATISSHVKSQEHRSKNLINRLEMVSLDQLV
        M +MQVED IQI LSEHIFGKEKTIYLRRDDI+QYCGM EIGYSCIL YIACLWN C+ E+ K+F++VDQATISSH+KSQE+RS+NLINRLEM +LDQLV
Subjt:  MLSMQVEDTIQIKLSEHIFGKEKTIYLRRDDIMQYCGMAEIGYSCILAYIACLWNACDCEVRKKFMIVDQATISSHVKSQEHRSKNLINRLEMVSLDQLV

Query:  LIPYNTG-CHWILIIINLQENCVYVMDSLRSKILEDFQGVINK
        LIPYNTG CHWILIII+LQENCVYVMD LRSKIL +FQGVINK
Subjt:  LIPYNTG-CHWILIIINLQENCVYVMDSLRSKILEDFQGVINK

A0A6J1C2H7 uncharacterized protein LOC111007859 isoform X19.0e-5172.34Show/hide
Query:  MLSMQVEDTIQIKLSEHIFGKEKTIYLRRDDIMQYCGMAEIGYSCILAYIACLWNACDCEVRKKFMIVDQATISSHVKSQEHRSKNLINRLEMVSLDQLV
        MLSMQ EDT++I LS+ IFGKEK IYL R+DIMQYC M EIGYSCIL YIA LW+  + E+ KKF+IVD ATIS +VKSQE+R +NL NRLEMV+L+QLV
Subjt:  MLSMQVEDTIQIKLSEHIFGKEKTIYLRRDDIMQYCGMAEIGYSCILAYIACLWNACDCEVRKKFMIVDQATISSHVKSQEHRSKNLINRLEMVSLDQLV

Query:  LIPYNTGCHWILIIINLQENCVYVMDSLRSKILEDFQGVIN
        LIPY +GCHW+LIIINL+ENCVYV+DSLR KI ED+Q VIN
Subjt:  LIPYNTGCHWILIIINLQENCVYVMDSLRSKILEDFQGVIN

A0A6J1C2V2 uncharacterized protein LOC111007859 isoform X49.0e-5172.34Show/hide
Query:  MLSMQVEDTIQIKLSEHIFGKEKTIYLRRDDIMQYCGMAEIGYSCILAYIACLWNACDCEVRKKFMIVDQATISSHVKSQEHRSKNLINRLEMVSLDQLV
        MLSMQ EDT++I LS+ IFGKEK IYL R+DIMQYC M EIGYSCIL YIA LW+  + E+ KKF+IVD ATIS +VKSQE+R +NL NRLEMV+L+QLV
Subjt:  MLSMQVEDTIQIKLSEHIFGKEKTIYLRRDDIMQYCGMAEIGYSCILAYIACLWNACDCEVRKKFMIVDQATISSHVKSQEHRSKNLINRLEMVSLDQLV

Query:  LIPYNTGCHWILIIINLQENCVYVMDSLRSKILEDFQGVIN
        LIPY +GCHW+LIIINL+ENCVYV+DSLR KI ED+Q VIN
Subjt:  LIPYNTGCHWILIIINLQENCVYVMDSLRSKILEDFQGVIN

A0A6J1C4J7 uncharacterized protein LOC111007859 isoform X29.0e-5172.34Show/hide
Query:  MLSMQVEDTIQIKLSEHIFGKEKTIYLRRDDIMQYCGMAEIGYSCILAYIACLWNACDCEVRKKFMIVDQATISSHVKSQEHRSKNLINRLEMVSLDQLV
        MLSMQ EDT++I LS+ IFGKEK IYL R+DIMQYC M EIGYSCIL YIA LW+  + E+ KKF+IVD ATIS +VKSQE+R +NL NRLEMV+L+QLV
Subjt:  MLSMQVEDTIQIKLSEHIFGKEKTIYLRRDDIMQYCGMAEIGYSCILAYIACLWNACDCEVRKKFMIVDQATISSHVKSQEHRSKNLINRLEMVSLDQLV

Query:  LIPYNTGCHWILIIINLQENCVYVMDSLRSKILEDFQGVIN
        LIPY +GCHW+LIIINL+ENCVYV+DSLR KI ED+Q VIN
Subjt:  LIPYNTGCHWILIIINLQENCVYVMDSLRSKILEDFQGVIN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTCTCCATGCAAGTGGAGGATACAATTCAAATCAAATTGAGTGAGCATATCTTTGGAAAGGAGAAGACAATTTACTTACGACGTGACGACATCATGCAATACTGTGG
GATGGCTGAAATTGGTTATTCATGTATACTTGCATACATTGCGTGTCTCTGGAATGCATGTGACTGTGAGGTCAGAAAAAAGTTTATGATAGTTGATCAAGCAACCATTT
CATCACATGTAAAGTCTCAAGAACATCGTTCCAAAAATCTAATCAATAGGTTAGAAATGGTAAGCTTGGATCAACTAGTACTCATCCCGTATAACACTGGTTGCCATTGG
ATATTGATTATTATCAATCTTCAAGAAAATTGTGTTTATGTCATGGACTCCTTGCGAAGTAAGATTCTAGAAGATTTTCAAGGAGTCATAAATAAGTAA
mRNA sequenceShow/hide mRNA sequence
ATGCTCTCCATGCAAGTGGAGGATACAATTCAAATCAAATTGAGTGAGCATATCTTTGGAAAGGAGAAGACAATTTACTTACGACGTGACGACATCATGCAATACTGTGG
GATGGCTGAAATTGGTTATTCATGTATACTTGCATACATTGCGTGTCTCTGGAATGCATGTGACTGTGAGGTCAGAAAAAAGTTTATGATAGTTGATCAAGCAACCATTT
CATCACATGTAAAGTCTCAAGAACATCGTTCCAAAAATCTAATCAATAGGTTAGAAATGGTAAGCTTGGATCAACTAGTACTCATCCCGTATAACACTGGTTGCCATTGG
ATATTGATTATTATCAATCTTCAAGAAAATTGTGTTTATGTCATGGACTCCTTGCGAAGTAAGATTCTAGAAGATTTTCAAGGAGTCATAAATAAGTAA
Protein sequenceShow/hide protein sequence
MLSMQVEDTIQIKLSEHIFGKEKTIYLRRDDIMQYCGMAEIGYSCILAYIACLWNACDCEVRKKFMIVDQATISSHVKSQEHRSKNLINRLEMVSLDQLVLIPYNTGCHW
ILIIINLQENCVYVMDSLRSKILEDFQGVINK