; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

HG10002542 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10002542
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionPolyamine-modulated factor 1/Kinetochore protein NNF
Genome locationChr11:8009159..8013469
RNA-Seq ExpressionHG10002542
SyntenyHG10002542
Gene Ontology termsGO:0007049 - cell cycle (biological process)
GO:0007059 - chromosome segregation (biological process)
GO:0051301 - cell division (biological process)
GO:0000818 - nuclear MIS12/MIND complex (cellular component)
InterPro domainsIPR007128 - Nuclear MIS12/MIND complex subunit PMF1/Nnf1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7015109.1 hypothetical protein SDJN02_22742 [Cucurbita argyrosperma subsp. argyrosperma]4.4e-6579.55Show/hide
Query:  MEKKHEIDTPVSSSQIDLKKSFKLAVRSLLTSCSREEFRECFSRFTTAEQEYLHRLFIQ----------DEFESLCVETQVMLLFLSTYYAQVGLILDNV
        M+KKHEI TPVSSSQIDLKKSFKLAVRSLLTSCSREEFRECFSRFTTAEQEYLHRLFIQ          DEFESLCVETQ         + QVGL+LDNV
Subjt:  MEKKHEIDTPVSSSQIDLKKSFKLAVRSLLTSCSREEFRECFSRFTTAEQEYLHRLFIQ----------DEFESLCVETQVMLLFLSTYYAQVGLILDNV

Query:  EQLLEQQDLDPLYSKKTNIVEIANCLSMTKKNEIQHLKDMLKTAEEQNRLIQGRIDVLRKGVQDVSGMADAVKKVQ
        EQLLE+QDLDPLYSKKTNI+EIAN LSMTKKNEIQHLKDMLKTAEEQNR +QGRID+LRKGVQD S M DAV+K++
Subjt:  EQLLEQQDLDPLYSKKTNIVEIANCLSMTKKNEIQHLKDMLKTAEEQNRLIQGRIDVLRKGVQDVSGMADAVKKVQ
XP_008451872.1 PREDICTED: uncharacterized protein LOC103493030 [Cucumis melo]2.4e-6378.98Show/hide
Query:  MEKKHEIDTPVSSSQIDLKKSFKLAVRSLLTSCSREEFRECFSRFTTAEQEYLHRLFIQ----------DEFESLCVETQVMLLFLSTYYAQVGLILDNV
        M KKHEIDTPV+S QIDLKKSFKLAVRSLLTSCSREEFRECFSRFTTAEQ+YLHRLFIQ          DEFESLCVET            QVGL+LDNV
Subjt:  MEKKHEIDTPVSSSQIDLKKSFKLAVRSLLTSCSREEFRECFSRFTTAEQEYLHRLFIQ----------DEFESLCVETQVMLLFLSTYYAQVGLILDNV

Query:  EQLLEQQDLDPLYSKKTNIVEIANCLSMTKKNEIQHLKDMLKTAEEQNRLIQGRIDVLRKGVQDVSGMADAVKKVQ
        EQLLE+QDLDPLYSKKTNIVEI+N LSM K  EIQHLKDMLKTAEEQNR+IQGRIDVLRKGVQD SGMADAVKK++
Subjt:  EQLLEQQDLDPLYSKKTNIVEIANCLSMTKKNEIQHLKDMLKTAEEQNRLIQGRIDVLRKGVQDVSGMADAVKKVQ
XP_022931290.1 uncharacterized protein LOC111437518 isoform X1 [Cucurbita moschata]6.3e-6478.98Show/hide
Query:  MEKKHEIDTPVSSSQIDLKKSFKLAVRSLLTSCSREEFRECFSRFTTAEQEYLHRLFIQ----------DEFESLCVETQVMLLFLSTYYAQVGLILDNV
        M+KKHEI TPVSSSQIDLKKSFKLAVRSLLTSCSREEFRECFSRFTTAEQEYLHRLFIQ          DEFESLCVET            QVGL+LDNV
Subjt:  MEKKHEIDTPVSSSQIDLKKSFKLAVRSLLTSCSREEFRECFSRFTTAEQEYLHRLFIQ----------DEFESLCVETQVMLLFLSTYYAQVGLILDNV

Query:  EQLLEQQDLDPLYSKKTNIVEIANCLSMTKKNEIQHLKDMLKTAEEQNRLIQGRIDVLRKGVQDVSGMADAVKKVQ
        EQLLE+QDLDPLYSKKTNI+EIAN LSMTKKNEIQHLKDMLKTAEEQNR +QGRID+LRKGVQD S M DAV+K++
Subjt:  EQLLEQQDLDPLYSKKTNIVEIANCLSMTKKNEIQHLKDMLKTAEEQNRLIQGRIDVLRKGVQDVSGMADAVKKVQ
XP_022985332.1 uncharacterized protein LOC111483373 isoform X1 [Cucurbita maxima]1.2e-6277.84Show/hide
Query:  MEKKHEIDTPVSSSQIDLKKSFKLAVRSLLTSCSREEFRECFSRFTTAEQEYLHRLFIQ----------DEFESLCVETQVMLLFLSTYYAQVGLILDNV
        M+KKHEI TPVSSSQIDLKKSFKLAVRSLLTSCSR EFRECFSRFTTAEQEYLHRLFIQ          DEFESLCVET            +VGL+LDNV
Subjt:  MEKKHEIDTPVSSSQIDLKKSFKLAVRSLLTSCSREEFRECFSRFTTAEQEYLHRLFIQ----------DEFESLCVETQVMLLFLSTYYAQVGLILDNV

Query:  EQLLEQQDLDPLYSKKTNIVEIANCLSMTKKNEIQHLKDMLKTAEEQNRLIQGRIDVLRKGVQDVSGMADAVKKVQ
        EQLLE+QDLDPLYSKKTNI+EIAN LSMTKKNEIQHLKDMLKTAEEQNR +QGRID+LRKGVQD S M DAV+K++
Subjt:  EQLLEQQDLDPLYSKKTNIVEIANCLSMTKKNEIQHLKDMLKTAEEQNRLIQGRIDVLRKGVQDVSGMADAVKKVQ
XP_038876216.1 uncharacterized protein LOC120068468 [Benincasa hispida]6.3e-6480.11Show/hide
Query:  MEKKHEIDTPVSSSQIDLKKSFKLAVRSLLTSCSREEFRECFSRFTTAEQEYLHRLFIQ----------DEFESLCVETQVMLLFLSTYYAQVGLILDNV
        MEKK EIDTPVSSSQIDLKKSFKLAVRSLLTSCSREEFRECFS+FT AEQEYLHRLFIQ          DEFESLCVET            QVGL+LDNV
Subjt:  MEKKHEIDTPVSSSQIDLKKSFKLAVRSLLTSCSREEFRECFSRFTTAEQEYLHRLFIQ----------DEFESLCVETQVMLLFLSTYYAQVGLILDNV

Query:  EQLLEQQDLDPLYSKKTNIVEIANCLSMTKKNEIQHLKDMLKTAEEQNRLIQGRIDVLRKGVQDVSGMADAVKKVQ
        EQLLE+Q+LDPLYSKKTNI+EIAN LS+TKKNEIQHLKDMLKTAEEQNRLIQGRIDVLRKGVQD S MADAVKK++
Subjt:  EQLLEQQDLDPLYSKKTNIVEIANCLSMTKKNEIQHLKDMLKTAEEQNRLIQGRIDVLRKGVQDVSGMADAVKKVQ
TrEMBL top hitse value%identityAlignment
A0A0A0KV94 Uncharacterized protein5.4e-6176.7Show/hide
Query:  MEKKHEIDTPVSSSQIDLKKSFKLAVRSLLTSCSREEFRECFSRFTTAEQEYLHRLFIQ----------DEFESLCVETQVMLLFLSTYYAQVGLILDNV
        M +KHE+D PVSS QIDLKKSFKLAVR LLTSCSREEFRECFSRFTTAEQ+YLHRLFIQ          DEFESLCVET            QVGL+ DNV
Subjt:  MEKKHEIDTPVSSSQIDLKKSFKLAVRSLLTSCSREEFRECFSRFTTAEQEYLHRLFIQ----------DEFESLCVETQVMLLFLSTYYAQVGLILDNV

Query:  EQLLEQQDLDPLYSKKTNIVEIANCLSMTKKNEIQHLKDMLKTAEEQNRLIQGRIDVLRKGVQDVSGMADAVKKVQ
        EQLLE+QDLDPLYSKKTNIVEI N LSMTKK EIQHLKDMLKTAEEQN +IQGRID LRKGVQD SGMADAVKK++
Subjt:  EQLLEQQDLDPLYSKKTNIVEIANCLSMTKKNEIQHLKDMLKTAEEQNRLIQGRIDVLRKGVQDVSGMADAVKKVQ
A0A1S3BTB0 uncharacterized protein LOC1034930301.2e-6378.98Show/hide
Query:  MEKKHEIDTPVSSSQIDLKKSFKLAVRSLLTSCSREEFRECFSRFTTAEQEYLHRLFIQ----------DEFESLCVETQVMLLFLSTYYAQVGLILDNV
        M KKHEIDTPV+S QIDLKKSFKLAVRSLLTSCSREEFRECFSRFTTAEQ+YLHRLFIQ          DEFESLCVET            QVGL+LDNV
Subjt:  MEKKHEIDTPVSSSQIDLKKSFKLAVRSLLTSCSREEFRECFSRFTTAEQEYLHRLFIQ----------DEFESLCVETQVMLLFLSTYYAQVGLILDNV

Query:  EQLLEQQDLDPLYSKKTNIVEIANCLSMTKKNEIQHLKDMLKTAEEQNRLIQGRIDVLRKGVQDVSGMADAVKKVQ
        EQLLE+QDLDPLYSKKTNIVEI+N LSM K  EIQHLKDMLKTAEEQNR+IQGRIDVLRKGVQD SGMADAVKK++
Subjt:  EQLLEQQDLDPLYSKKTNIVEIANCLSMTKKNEIQHLKDMLKTAEEQNRLIQGRIDVLRKGVQDVSGMADAVKKVQ
A0A5A7TAS4 Uncharacterized protein1.2e-6378.98Show/hide
Query:  MEKKHEIDTPVSSSQIDLKKSFKLAVRSLLTSCSREEFRECFSRFTTAEQEYLHRLFIQ----------DEFESLCVETQVMLLFLSTYYAQVGLILDNV
        M KKHEIDTPV+S QIDLKKSFKLAVRSLLTSCSREEFRECFSRFTTAEQ+YLHRLFIQ          DEFESLCVET            QVGL+LDNV
Subjt:  MEKKHEIDTPVSSSQIDLKKSFKLAVRSLLTSCSREEFRECFSRFTTAEQEYLHRLFIQ----------DEFESLCVETQVMLLFLSTYYAQVGLILDNV

Query:  EQLLEQQDLDPLYSKKTNIVEIANCLSMTKKNEIQHLKDMLKTAEEQNRLIQGRIDVLRKGVQDVSGMADAVKKVQ
        EQLLE+QDLDPLYSKKTNIVEI+N LSM K  EIQHLKDMLKTAEEQNR+IQGRIDVLRKGVQD SGMADAVKK++
Subjt:  EQLLEQQDLDPLYSKKTNIVEIANCLSMTKKNEIQHLKDMLKTAEEQNRLIQGRIDVLRKGVQDVSGMADAVKKVQ
A0A6J1EZ15 uncharacterized protein LOC111437518 isoform X13.1e-6478.98Show/hide
Query:  MEKKHEIDTPVSSSQIDLKKSFKLAVRSLLTSCSREEFRECFSRFTTAEQEYLHRLFIQ----------DEFESLCVETQVMLLFLSTYYAQVGLILDNV
        M+KKHEI TPVSSSQIDLKKSFKLAVRSLLTSCSREEFRECFSRFTTAEQEYLHRLFIQ          DEFESLCVET            QVGL+LDNV
Subjt:  MEKKHEIDTPVSSSQIDLKKSFKLAVRSLLTSCSREEFRECFSRFTTAEQEYLHRLFIQ----------DEFESLCVETQVMLLFLSTYYAQVGLILDNV

Query:  EQLLEQQDLDPLYSKKTNIVEIANCLSMTKKNEIQHLKDMLKTAEEQNRLIQGRIDVLRKGVQDVSGMADAVKKVQ
        EQLLE+QDLDPLYSKKTNI+EIAN LSMTKKNEIQHLKDMLKTAEEQNR +QGRID+LRKGVQD S M DAV+K++
Subjt:  EQLLEQQDLDPLYSKKTNIVEIANCLSMTKKNEIQHLKDMLKTAEEQNRLIQGRIDVLRKGVQDVSGMADAVKKVQ
A0A6J1J4K9 uncharacterized protein LOC111483373 isoform X15.8e-6377.84Show/hide
Query:  MEKKHEIDTPVSSSQIDLKKSFKLAVRSLLTSCSREEFRECFSRFTTAEQEYLHRLFIQ----------DEFESLCVETQVMLLFLSTYYAQVGLILDNV
        M+KKHEI TPVSSSQIDLKKSFKLAVRSLLTSCSR EFRECFSRFTTAEQEYLHRLFIQ          DEFESLCVET            +VGL+LDNV
Subjt:  MEKKHEIDTPVSSSQIDLKKSFKLAVRSLLTSCSREEFRECFSRFTTAEQEYLHRLFIQ----------DEFESLCVETQVMLLFLSTYYAQVGLILDNV

Query:  EQLLEQQDLDPLYSKKTNIVEIANCLSMTKKNEIQHLKDMLKTAEEQNRLIQGRIDVLRKGVQDVSGMADAVKKVQ
        EQLLE+QDLDPLYSKKTNI+EIAN LSMTKKNEIQHLKDMLKTAEEQNR +QGRID+LRKGVQD S M DAV+K++
Subjt:  EQLLEQQDLDPLYSKKTNIVEIANCLSMTKKNEIQHLKDMLKTAEEQNRLIQGRIDVLRKGVQDVSGMADAVKKVQ
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G19350.1 embryo defective 30062.2e-3044.04Show/hide
Query:  MEKK-HEIDTPVSSSQIDLKKSFKLAVRSLLTSCSREEFRECFSRFTTAEQEYLHRLF----------IQDEFESLCVETQVMLLFLSTYYAQVGLILDN
        MEK  HE D    S +  LKKSFK  +R LLT+CS+++F + FS+F+ AEQE L +L+          I++EF+  C ET            QVG ILD 
Subjt:  MEKK-HEIDTPVSSSQIDLKKSFKLAVRSLLTSCSREEFRECFSRFTTAEQEYLHRLF----------IQDEFESLCVETQVMLLFLSTYYAQVGLILDN

Query:  VEQLLEQQDLDPLYSKKTNIVEIANCLSMTKKNEIQHLKDMLKTAEEQNRLIQGRIDVLRKGVQDVSGMADAVKKVQ------FLFGDLFPPL
        VE+L+E+Q LDPL+S KT+++ IA  L+ +KKNEIQ L  +L+ AEEQNR  + RI +L+K  QD+SG AD ++K+       F   D  PP+
Subjt:  VEQLLEQQDLDPLYSKKTNIVEIANCLSMTKKNEIQHLKDMLKTAEEQNRLIQGRIDVLRKGVQDVSGMADAVKKVQ------FLFGDLFPPL

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGAAGAAGCACGAGATTGATACTCCGGTGAGCTCCAGCCAGATTGATCTGAAAAAGTCCTTCAAGCTTGCCGTTCGTTCTCTCCTCACTTCCTGTTCCAGGGAGGA
GTTTCGGGAATGCTTTTCGAGATTTACGACTGCGGAGCAAGAATATCTTCATCGTCTTTTCATTCAGGACGAGTTTGAGTCATTATGTGTTGAAACACAGGTAATGCTCC
TGTTTCTGTCGACTTATTATGCCCAGGTGGGACTTATACTTGATAATGTTGAACAACTTTTGGAACAGCAAGATCTAGACCCATTGTATTCCAAGAAGACTAATATTGTG
GAAATTGCCAATTGTCTGTCCATGACAAAGAAGAATGAGATTCAACACTTGAAGGACATGCTAAAAACGGCCGAGGAACAGAACCGGCTTATTCAAGGCCGTATCGATGT
CCTAAGGAAAGGAGTGCAAGATGTCTCAGGCATGGCAGATGCTGTTAAAAAGGTGCAATTTTTATTTGGCGACCTTTTCCCACCTCTTTCAAATGGATAA
mRNA sequenceShow/hide mRNA sequence
ATGGAGAAGAAGCACGAGATTGATACTCCGGTGAGCTCCAGCCAGATTGATCTGAAAAAGTCCTTCAAGCTTGCCGTTCGTTCTCTCCTCACTTCCTGTTCCAGGGAGGA
GTTTCGGGAATGCTTTTCGAGATTTACGACTGCGGAGCAAGAATATCTTCATCGTCTTTTCATTCAGGACGAGTTTGAGTCATTATGTGTTGAAACACAGGTAATGCTCC
TGTTTCTGTCGACTTATTATGCCCAGGTGGGACTTATACTTGATAATGTTGAACAACTTTTGGAACAGCAAGATCTAGACCCATTGTATTCCAAGAAGACTAATATTGTG
GAAATTGCCAATTGTCTGTCCATGACAAAGAAGAATGAGATTCAACACTTGAAGGACATGCTAAAAACGGCCGAGGAACAGAACCGGCTTATTCAAGGCCGTATCGATGT
CCTAAGGAAAGGAGTGCAAGATGTCTCAGGCATGGCAGATGCTGTTAAAAAGGTGCAATTTTTATTTGGCGACCTTTTCCCACCTCTTTCAAATGGATAA
Protein sequenceShow/hide protein sequence
MEKKHEIDTPVSSSQIDLKKSFKLAVRSLLTSCSREEFRECFSRFTTAEQEYLHRLFIQDEFESLCVETQVMLLFLSTYYAQVGLILDNVEQLLEQQDLDPLYSKKTNIV
EIANCLSMTKKNEIQHLKDMLKTAEEQNRLIQGRIDVLRKGVQDVSGMADAVKKVQFLFGDLFPPLSNG