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HG10002554 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10002554
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionUnknown protein
Genome locationChr11:8184744..8185283
RNA-Seq ExpressionHG10002554
SyntenyHG10002554
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ACL53810.1 unknown [Zea mays]5.1e-0546.58Show/hide
Query:  HRQIEVMEKVRAPIYLVEGSSVSEDEIDGALNVAIFEVMAATIVVESVLSAEESTAPKRRLVSADSNRHRLRS
        HR   +  +V+  + LVEG+ V+EDE+DGAL+VA+ EV+ A +V + VL A E  A +  LV+ D+ RHRL S
Subjt:  HRQIEVMEKVRAPIYLVEGSSVSEDEIDGALNVAIFEVMAATIVVESVLSAEESTAPKRRLVSADSNRHRLRS

PON39834.1 hypothetical protein PanWU01x14_301850 [Parasponia andersonii]7.1e-1561.43Show/hide
Query:  MTVLAKTTRENGRHARPSHTLPVPPMLQLTKANPEFSSAEALPCAVTAPFTNFDPCGTGFAIEINWQLYN
        + V AKTTRENG  ARPSHTLPVPP++Q     P  SS +ALPCAV  P  +FDP  TGFA+EI+WQ  N
Subjt:  MTVLAKTTRENGRHARPSHTLPVPPMLQLTKANPEFSSAEALPCAVTAPFTNFDPCGTGFAIEINWQLYN

PON41033.1 hypothetical protein TorRG33x02_339020 [Trema orientale]5.4e-1561.43Show/hide
Query:  MTVLAKTTRENGRHARPSHTLPVPPMLQLTKANPEFSSAEALPCAVTAPFTNFDPCGTGFAIEINWQLYN
        + V AKTTRENG  ARPSHT PVPP++Q     P  SS +ALPCAV  P  NFDP  TGFA+EI+WQ  N
Subjt:  MTVLAKTTRENGRHARPSHTLPVPPMLQLTKANPEFSSAEALPCAVTAPFTNFDPCGTGFAIEINWQLYN

RRT54664.1 hypothetical protein B296_00039112 [Ensete ventricosum]4.2e-1567.65Show/hide
Query:  MTVLAKTTRENGRHARPSHTLPVPPMLQLTKANPEFSSAEALPCAVTAPFTNFDPCGTGFAIEINWQL
        M VLAKTTRENG HARPS   PVPPM QLTK  P FSS +A PCAVT P   F P  TG AI+I WQL
Subjt:  MTVLAKTTRENGRHARPSHTLPVPPMLQLTKANPEFSSAEALPCAVTAPFTNFDPCGTGFAIEINWQL

TrEMBL top hitse value%identityAlignment
A0A2P5ATG6 Uncharacterized protein3.4e-1561.43Show/hide
Query:  MTVLAKTTRENGRHARPSHTLPVPPMLQLTKANPEFSSAEALPCAVTAPFTNFDPCGTGFAIEINWQLYN
        + V AKTTRENG  ARPSHTLPVPP++Q     P  SS +ALPCAV  P  +FDP  TGFA+EI+WQ  N
Subjt:  MTVLAKTTRENGRHARPSHTLPVPPMLQLTKANPEFSSAEALPCAVTAPFTNFDPCGTGFAIEINWQLYN

A0A2P5AWV7 Uncharacterized protein2.6e-1561.43Show/hide
Query:  MTVLAKTTRENGRHARPSHTLPVPPMLQLTKANPEFSSAEALPCAVTAPFTNFDPCGTGFAIEINWQLYN
        + V AKTTRENG  ARPSHT PVPP++Q     P  SS +ALPCAV  P  NFDP  TGFA+EI+WQ  N
Subjt:  MTVLAKTTRENGRHARPSHTLPVPPMLQLTKANPEFSSAEALPCAVTAPFTNFDPCGTGFAIEINWQLYN

A0A426YSG1 Uncharacterized protein2.0e-1567.65Show/hide
Query:  MTVLAKTTRENGRHARPSHTLPVPPMLQLTKANPEFSSAEALPCAVTAPFTNFDPCGTGFAIEINWQL
        M VLAKTTRENG HARPS   PVPPM QLTK  P FSS +A PCAVT P   F P  TG AI+I WQL
Subjt:  MTVLAKTTRENGRHARPSHTLPVPPMLQLTKANPEFSSAEALPCAVTAPFTNFDPCGTGFAIEINWQL

B8A0W1 Uncharacterized protein2.5e-0546.58Show/hide
Query:  HRQIEVMEKVRAPIYLVEGSSVSEDEIDGALNVAIFEVMAATIVVESVLSAEESTAPKRRLVSADSNRHRLRS
        HR   +  +V+  + LVEG+ V+EDE+DGAL+VA+ EV+ A +V + VL A E  A +  LV+ D+ RHRL S
Subjt:  HRQIEVMEKVRAPIYLVEGSSVSEDEIDGALNVAIFEVMAATIVVESVLSAEESTAPKRRLVSADSNRHRLRS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACGGTGTTAGCAAAGACGACGCGAGAGAACGGCCGCCACGCGCGGCCGAGCCACACTCTACCGGTCCCGCCGATGCTGCAATTAACAAAAGCAAATCCAGAGTTCTC
GTCAGCGGAGGCTCTGCCGTGCGCCGTCACCGCACCGTTCACAAACTTCGATCCTTGCGGAACCGGATTCGCCATCGAAATCAACTGGCAACTCTACAATACGGCGTCAC
AAGATTTTCAAAATCGCGATTCTGAAATTCATCGTCAAATCGAAGTCATGGAAAAAGTTAGGGCTCCGATTTACCTCGTAGAAGGATCTTCCGTTTCCGAAGATGAAATC
GATGGAGCCTTGAATGTAGCAATCTTTGAAGTAATGGCGGCCACGATCGTCGTGGAGAGTGTCTTGAGCGCCGAAGAATCCACAGCTCCAAAACGCCGCCTGGTCTCCGC
CGATTCTAATCGCCACCGCCTGCGCTCCGACGTCGCCCGGCCCAGGAATTGGCGCCACATTCTGCCAAAGCCCCAAAAATATTTGCTCAAAATTAAGTGA
mRNA sequenceShow/hide mRNA sequence
ATGACGGTGTTAGCAAAGACGACGCGAGAGAACGGCCGCCACGCGCGGCCGAGCCACACTCTACCGGTCCCGCCGATGCTGCAATTAACAAAAGCAAATCCAGAGTTCTC
GTCAGCGGAGGCTCTGCCGTGCGCCGTCACCGCACCGTTCACAAACTTCGATCCTTGCGGAACCGGATTCGCCATCGAAATCAACTGGCAACTCTACAATACGGCGTCAC
AAGATTTTCAAAATCGCGATTCTGAAATTCATCGTCAAATCGAAGTCATGGAAAAAGTTAGGGCTCCGATTTACCTCGTAGAAGGATCTTCCGTTTCCGAAGATGAAATC
GATGGAGCCTTGAATGTAGCAATCTTTGAAGTAATGGCGGCCACGATCGTCGTGGAGAGTGTCTTGAGCGCCGAAGAATCCACAGCTCCAAAACGCCGCCTGGTCTCCGC
CGATTCTAATCGCCACCGCCTGCGCTCCGACGTCGCCCGGCCCAGGAATTGGCGCCACATTCTGCCAAAGCCCCAAAAATATTTGCTCAAAATTAAGTGA
Protein sequenceShow/hide protein sequence
MTVLAKTTRENGRHARPSHTLPVPPMLQLTKANPEFSSAEALPCAVTAPFTNFDPCGTGFAIEINWQLYNTASQDFQNRDSEIHRQIEVMEKVRAPIYLVEGSSVSEDEI
DGALNVAIFEVMAATIVVESVLSAEESTAPKRRLVSADSNRHRLRSDVARPRNWRHILPKPQKYLLKIK