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HG10002608 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10002608
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionFlocculation protein FLO11-like
Genome locationChr11:8838682..8839193
RNA-Seq ExpressionHG10002608
SyntenyHG10002608
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0058927.1 flocculation protein FLO11-like [Cucumis melo var. makuwa]4.6e-0461.54Show/hide
Query:  SSRTGMNKNPPSVHVVPLDGISFHSKESDSLWKYVVKRQ
        S++TG  K PP+V  VP+DG+SFHS+E    WKYVVKRQ
Subjt:  SSRTGMNKNPPSVHVVPLDGISFHSKESDSLWKYVVKRQ
XP_008441650.1 PREDICTED: uncharacterized protein LOC103485731 [Cucumis melo]4.6e-0461.54Show/hide
Query:  SSRTGMNKNPPSVHVVPLDGISFHSKESDSLWKYVVKRQ
        S++TG  K PP+V  VP+DG+SFHS+E    WKYVVKRQ
Subjt:  SSRTGMNKNPPSVHVVPLDGISFHSKESDSLWKYVVKRQ
XP_038904247.1 uncharacterized protein LOC120090596 [Benincasa hispida]7.9e-0436.45Show/hide
Query:  ERCVEAEDEPLIIEGMSKEKMCTDDDIPLSVFSRKKKIKFEDVDALSPQDVVDDLSSEEDSPRQAGDNRSSRTGMNKNPPSVHVVPLDGISFHSKESDSL
        E CVE E  P  +       M +DD    S FS       + VD++S   V    SS ED      +N  +R G  K PP+V +V +D ISFHS+++   
Subjt:  ERCVEAEDEPLIIEGMSKEKMCTDDDIPLSVFSRKKKIKFEDVDALSPQDVVDDLSSEEDSPRQAGDNRSSRTGMNKNPPSVHVVPLDGISFHSKESDSL

Query:  WKYVVKR
        WK+VV+R
Subjt:  WKYVVKR
TrEMBL top hitse value%identityAlignment
A0A1S3B3W7 uncharacterized protein LOC1034857312.2e-0461.54Show/hide
Query:  SSRTGMNKNPPSVHVVPLDGISFHSKESDSLWKYVVKRQ
        S++TG  K PP+V  VP+DG+SFHS+E    WKYVVKRQ
Subjt:  SSRTGMNKNPPSVHVVPLDGISFHSKESDSLWKYVVKRQ
A0A5A7UJM1 Flocculation protein FLO11-like6.5e-0446.03Show/hide
Query:  LSPQDVVDDLSSEEDSPRQAGDNRSSRTGMNKNPPSVHVVPLDGISFHSKESDSLWKYVVKRQ
        +SP D VD  S     P +     S++ G  K  P+V  +P+DG+SFHSKE    WKYVVKRQ
Subjt:  LSPQDVVDDLSSEEDSPRQAGDNRSSRTGMNKNPPSVHVVPLDGISFHSKESDSLWKYVVKRQ
A0A5D3D6H2 Envelope-like protein5.0e-0443.33Show/hide
Query:  DVVDDLSSEEDSPRQAGDNRSSRTGMNKNPPSVHVVPLDGISFHSKESDSLWKYVVKRQF
        ++ D+  S +   +Q   N +++TG  K PP+V  VP+DGISFH +ES   WK+VV+R F
Subjt:  DVVDDLSSEEDSPRQAGDNRSSRTGMNKNPPSVHVVPLDGISFHSKESDSLWKYVVKRQF
A0A5D3DJ92 Flocculation protein FLO11-like2.2e-0461.54Show/hide
Query:  SSRTGMNKNPPSVHVVPLDGISFHSKESDSLWKYVVKRQ
        S++TG  K PP+V  VP+DG+SFHS+E    WKYVVKRQ
Subjt:  SSRTGMNKNPPSVHVVPLDGISFHSKESDSLWKYVVKRQ
A0A5D3DM88 Flocculation protein FLO11-like8.5e-0456.41Show/hide
Query:  SSRTGMNKNPPSVHVVPLDGISFHSKESDSLWKYVVKRQ
        S++ G  K PP+V  +P+DG+SFHS+E    WKYVVKRQ
Subjt:  SSRTGMNKNPPSVHVVPLDGISFHSKESDSLWKYVVKRQ
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTGTTGTGTGTGCTGAGAATCAAGTTGTTTCTTCTAATGTTAATATTGACTTAAATGTCTCTGCTGGTTCGAAAGACCATAGTTTTGTTAATCGTAATGCTAAAGA
AAGATGTGTTGAAGCTGAGGATGAACCTTTAATTATTGAGGGCATGTCTAAAGAGAAAATGTGTACTGATGATGATATTCCTCTAAGTGTTTTCAGTAGGAAGAAGAAAA
TAAAATTTGAGGATGTTGATGCCTTAAGTCCTCAAGATGTGGTCGATGACTTAAGCTCTGAGGAAGATAGTCCTCGTCAGGCTGGTGATAATCGGTCTTCTAGAACTGGA
ATGAATAAAAATCCTCCTAGTGTTCATGTTGTGCCTCTGGATGGTATCTCTTTTCACTCCAAAGAGAGTGATAGTTTGTGGAAATATGTGGTCAAGAGACAATTTTTTTT
ATGA
mRNA sequenceShow/hide mRNA sequence
ATGTCTGTTGTGTGTGCTGAGAATCAAGTTGTTTCTTCTAATGTTAATATTGACTTAAATGTCTCTGCTGGTTCGAAAGACCATAGTTTTGTTAATCGTAATGCTAAAGA
AAGATGTGTTGAAGCTGAGGATGAACCTTTAATTATTGAGGGCATGTCTAAAGAGAAAATGTGTACTGATGATGATATTCCTCTAAGTGTTTTCAGTAGGAAGAAGAAAA
TAAAATTTGAGGATGTTGATGCCTTAAGTCCTCAAGATGTGGTCGATGACTTAAGCTCTGAGGAAGATAGTCCTCGTCAGGCTGGTGATAATCGGTCTTCTAGAACTGGA
ATGAATAAAAATCCTCCTAGTGTTCATGTTGTGCCTCTGGATGGTATCTCTTTTCACTCCAAAGAGAGTGATAGTTTGTGGAAATATGTGGTCAAGAGACAATTTTTTTT
ATGA
Protein sequenceShow/hide protein sequence
MSVVCAENQVVSSNVNIDLNVSAGSKDHSFVNRNAKERCVEAEDEPLIIEGMSKEKMCTDDDIPLSVFSRKKKIKFEDVDALSPQDVVDDLSSEEDSPRQAGDNRSSRTG
MNKNPPSVHVVPLDGISFHSKESDSLWKYVVKRQFFL