; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

HG10002618 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10002618
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionPectin lyase-like superfamily protein
Genome locationChr11:9002750..9004269
RNA-Seq ExpressionHG10002618
SyntenyHG10002618
Gene Ontology termsGO:0005975 - carbohydrate metabolic process (biological process)
GO:0004650 - polygalacturonase activity (molecular function)
InterPro domainsIPR000743 - Glycoside hydrolase, family 28
IPR011050 - Pectin lyase fold/virulence factor
IPR012334 - Pectin lyase fold


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0063000.1 exopolygalacturonase [Cucumis melo var. makuwa]7.6e-9449.75Show/hide
Query:  MGLKKCCVFKVFLVGFFLFSIKELEARNH-VDKPKFFNVVNYGAIPDGTTDNSKAFLEAWNDACEWKGRGRVYVPKGTFKLGEVLFLGPCEGQMAFVMKG
        MGLKKC VF+VFL+G  LFSI+ELEA N+   KPKFFNVVNYGAIPDG TDNSKAFL+AWNDACEWKGRGRVYVPKGTFKLGEVLFLGPCEG  AF++KG
Subjt:  MGLKKCCVFKVFLVGFFLFSIKELEARNH-VDKPKFFNVVNYGAIPDGTTDNSKAFLEAWNDACEWKGRGRVYVPKGTFKLGEVLFLGPCEGQMAFVMKG

Query:  ILKAPTDMSSLYGDSWINFRYVDWLTVSGGGSLDGQGAMAWPRNECKKNPNCQSLPT-------------------------------------------
        ILKA TDMSSLYGDSWINFRYVD LTV GGGSLDGQGA+AWPRN+CK NPNCQSLPT                                           
Subjt:  ILKAPTDMSSLYGDSWINFRYVDWLTVSGGGSLDGQGAMAWPRNECKKNPNCQSLPT-------------------------------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  -----------------------------GSSRVQISNVTFKNIWGSSKSANAVTLRCSKSKPCKNIVLDNINLTSYPNVGQLFSSCFHVHGFSYGNQSP
                                      SSR+QIS VTFKNIWGSSKSA+AVTLRCSK KPCKNIVLDNINL S P+VGQLFSSCFHVHGFSYGNQSP
Subjt:  -----------------------------GSSRVQISNVTFKNIWGSSKSANAVTLRCSKSKPCKNIVLDNINLTSYPNVGQLFSSCFHVHGFSYGNQSP

Query:  YSCL
        YSCL
Subjt:  YSCL

KAE8649244.1 hypothetical protein Csa_014726 [Cucumis sativus]3.2e-9248.88Show/hide
Query:  MGLKKCCVFKVFLVGFFLFSIKELEARNHVDKPKFFNVVNYGAIPDGTTDNSKAFLEAWNDACEWKGRGRVYVPKGTFKLGEVLFLGPCEGQMAFVMKGI
        MGLKKC VF VF + FFLFSI+ELEA N+   PKFFNVV YGAIPDG TDNSKAFL+AWNDACEWKGRGRVYVPKGTFKLGEVLFLGPCEG  AFV+KGI
Subjt:  MGLKKCCVFKVFLVGFFLFSIKELEARNHVDKPKFFNVVNYGAIPDGTTDNSKAFLEAWNDACEWKGRGRVYVPKGTFKLGEVLFLGPCEGQMAFVMKGI

Query:  LKAPTDMSSLYGDSWINFRYVDWLTVSGGGSLDGQGAMAWPRNECKKNPNCQSLPT--------------------------------------------
        LKA TDMSSLYGDSWINFRYVD LTV GGGSLDGQGA+AWPRN+C+ NPNC+SLPT                                            
Subjt:  LKAPTDMSSLYGDSWINFRYVDWLTVSGGGSLDGQGAMAWPRNECKKNPNCQSLPT--------------------------------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  ----------------------------GSSRVQISNVTFKNIWGSSKSANAVTLRCSKSKPCKNIVLDNINLTSYPNVGQLFSSCFHVHGFSYGNQSPY
                                     SSR+QIS VTFKNIWGSSKSA+AVTLRCS+ KPCKNIVLDNINL S PNVG+LFSSCFHVHGFSYGNQSPY
Subjt:  ----------------------------GSSRVQISNVTFKNIWGSSKSANAVTLRCSKSKPCKNIVLDNINLTSYPNVGQLFSSCFHVHGFSYGNQSPY

Query:  SCL
        SCL
Subjt:  SCL

KAG6600480.1 Exopolygalacturonase, partial [Cucurbita argyrosperma subsp. sororia]8.6e-9877.49Show/hide
Query:  MGLKKCCVFKVFLVGFFLFSIKELEARNHVDKPKFFNVVNYGAIPDGTTDNSKAFLEAWNDACEWKGRGRVYVPKGTFKLGEVLFLGPCEGQMAFVMKGI
        MGLKKC V +   V FFLF     E    V +PK FNVV YGAIPDGTTDNSKAFLEAW DACEWKGRGRVYVPKGTFKL  VLFLGPCEGQMAFV+KGI
Subjt:  MGLKKCCVFKVFLVGFFLFSIKELEARNHVDKPKFFNVVNYGAIPDGTTDNSKAFLEAWNDACEWKGRGRVYVPKGTFKLGEVLFLGPCEGQMAFVMKGI

Query:  LKAPTDMSSLYGDSWINFRYVDWLTVSGGGSLDGQGAMAWPRNECKKNPNCQSLPTGSSRVQISNVTFKNIWGSSKSANAVTLRCSKSKPCKNIVLDNIN
        LKAPTDMS L  DSWINFRYVD L+VSGGGSLDG+G++AWPRNECKKNPNCQSLPT SS VQISNVTFKNIWG SKSA+AVTLRCSK++PCK+IVL++I+
Subjt:  LKAPTDMSSLYGDSWINFRYVDWLTVSGGGSLDGQGAMAWPRNECKKNPNCQSLPTGSSRVQISNVTFKNIWGSSKSANAVTLRCSKSKPCKNIVLDNIN

Query:  LTSYPNVGQLFSSCFHVHGFSYGNQSPYSCL
        L S P VGQ+FSSC +V+GFSYG QSP  CL
Subjt:  LTSYPNVGQLFSSCFHVHGFSYGNQSPYSCL

XP_011654343.2 exopolygalacturonase [Cucumis sativus]3.2e-9248.88Show/hide
Query:  MGLKKCCVFKVFLVGFFLFSIKELEARNHVDKPKFFNVVNYGAIPDGTTDNSKAFLEAWNDACEWKGRGRVYVPKGTFKLGEVLFLGPCEGQMAFVMKGI
        MGLKKC VF VF + FFLFSI+ELEA N+   PKFFNVV YGAIPDG TDNSKAFL+AWNDACEWKGRGRVYVPKGTFKLGEVLFLGPCEG  AFV+KGI
Subjt:  MGLKKCCVFKVFLVGFFLFSIKELEARNHVDKPKFFNVVNYGAIPDGTTDNSKAFLEAWNDACEWKGRGRVYVPKGTFKLGEVLFLGPCEGQMAFVMKGI

Query:  LKAPTDMSSLYGDSWINFRYVDWLTVSGGGSLDGQGAMAWPRNECKKNPNCQSLPT--------------------------------------------
        LKA TDMSSLYGDSWINFRYVD LTV GGGSLDGQGA+AWPRN+C+ NPNC+SLPT                                            
Subjt:  LKAPTDMSSLYGDSWINFRYVDWLTVSGGGSLDGQGAMAWPRNECKKNPNCQSLPT--------------------------------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  ----------------------------GSSRVQISNVTFKNIWGSSKSANAVTLRCSKSKPCKNIVLDNINLTSYPNVGQLFSSCFHVHGFSYGNQSPY
                                     SSR+QIS VTFKNIWGSSKSA+AVTLRCS+ KPCKNIVLDNINL S PNVG+LFSSCFHVHGFSYGNQSPY
Subjt:  ----------------------------GSSRVQISNVTFKNIWGSSKSANAVTLRCSKSKPCKNIVLDNINLTSYPNVGQLFSSCFHVHGFSYGNQSPY

Query:  SCL
        SCL
Subjt:  SCL

XP_016901151.1 PREDICTED: exopolygalacturonase [Cucumis melo]9.9e-9449.5Show/hide
Query:  MGLKKCCVFKVFLVGFFLFSIKELEARNH-VDKPKFFNVVNYGAIPDGTTDNSKAFLEAWNDACEWKGRGRVYVPKGTFKLGEVLFLGPCEGQMAFVMKG
        MGLKKC VF++FL+G  LFSI+ELEA N+   KPKFFNVVNYGAIPDG TDNSKAFL+AWNDACEWKGRGRVYVPKGTFKLGEVLFLGPCEG  AF++KG
Subjt:  MGLKKCCVFKVFLVGFFLFSIKELEARNH-VDKPKFFNVVNYGAIPDGTTDNSKAFLEAWNDACEWKGRGRVYVPKGTFKLGEVLFLGPCEGQMAFVMKG

Query:  ILKAPTDMSSLYGDSWINFRYVDWLTVSGGGSLDGQGAMAWPRNECKKNPNCQSLPT-------------------------------------------
        ILKA TDMSSLYGDSWINFRYVD LTV GGGSLDGQGA+AWPRN+CK NPNCQSLPT                                           
Subjt:  ILKAPTDMSSLYGDSWINFRYVDWLTVSGGGSLDGQGAMAWPRNECKKNPNCQSLPT-------------------------------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  -----------------------------GSSRVQISNVTFKNIWGSSKSANAVTLRCSKSKPCKNIVLDNINLTSYPNVGQLFSSCFHVHGFSYGNQSP
                                      SSR+QIS VTFKNIWGSSKSA+AVTLRCSK KPCKNIVLDNINL S P+VGQLFSSCFHVHGFSYGNQSP
Subjt:  -----------------------------GSSRVQISNVTFKNIWGSSKSANAVTLRCSKSKPCKNIVLDNINLTSYPNVGQLFSSCFHVHGFSYGNQSP

Query:  YSCL
        YSCL
Subjt:  YSCL

TrEMBL top hitse value%identityAlignment
A0A1S4DYT5 exopolygalacturonase4.8e-9449.5Show/hide
Query:  MGLKKCCVFKVFLVGFFLFSIKELEARNH-VDKPKFFNVVNYGAIPDGTTDNSKAFLEAWNDACEWKGRGRVYVPKGTFKLGEVLFLGPCEGQMAFVMKG
        MGLKKC VF++FL+G  LFSI+ELEA N+   KPKFFNVVNYGAIPDG TDNSKAFL+AWNDACEWKGRGRVYVPKGTFKLGEVLFLGPCEG  AF++KG
Subjt:  MGLKKCCVFKVFLVGFFLFSIKELEARNH-VDKPKFFNVVNYGAIPDGTTDNSKAFLEAWNDACEWKGRGRVYVPKGTFKLGEVLFLGPCEGQMAFVMKG

Query:  ILKAPTDMSSLYGDSWINFRYVDWLTVSGGGSLDGQGAMAWPRNECKKNPNCQSLPT-------------------------------------------
        ILKA TDMSSLYGDSWINFRYVD LTV GGGSLDGQGA+AWPRN+CK NPNCQSLPT                                           
Subjt:  ILKAPTDMSSLYGDSWINFRYVDWLTVSGGGSLDGQGAMAWPRNECKKNPNCQSLPT-------------------------------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  -----------------------------GSSRVQISNVTFKNIWGSSKSANAVTLRCSKSKPCKNIVLDNINLTSYPNVGQLFSSCFHVHGFSYGNQSP
                                      SSR+QIS VTFKNIWGSSKSA+AVTLRCSK KPCKNIVLDNINL S P+VGQLFSSCFHVHGFSYGNQSP
Subjt:  -----------------------------GSSRVQISNVTFKNIWGSSKSANAVTLRCSKSKPCKNIVLDNINLTSYPNVGQLFSSCFHVHGFSYGNQSP

Query:  YSCL
        YSCL
Subjt:  YSCL

A0A5A7V6Y6 Exopolygalacturonase3.7e-9449.75Show/hide
Query:  MGLKKCCVFKVFLVGFFLFSIKELEARNH-VDKPKFFNVVNYGAIPDGTTDNSKAFLEAWNDACEWKGRGRVYVPKGTFKLGEVLFLGPCEGQMAFVMKG
        MGLKKC VF+VFL+G  LFSI+ELEA N+   KPKFFNVVNYGAIPDG TDNSKAFL+AWNDACEWKGRGRVYVPKGTFKLGEVLFLGPCEG  AF++KG
Subjt:  MGLKKCCVFKVFLVGFFLFSIKELEARNH-VDKPKFFNVVNYGAIPDGTTDNSKAFLEAWNDACEWKGRGRVYVPKGTFKLGEVLFLGPCEGQMAFVMKG

Query:  ILKAPTDMSSLYGDSWINFRYVDWLTVSGGGSLDGQGAMAWPRNECKKNPNCQSLPT-------------------------------------------
        ILKA TDMSSLYGDSWINFRYVD LTV GGGSLDGQGA+AWPRN+CK NPNCQSLPT                                           
Subjt:  ILKAPTDMSSLYGDSWINFRYVDWLTVSGGGSLDGQGAMAWPRNECKKNPNCQSLPT-------------------------------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  -----------------------------GSSRVQISNVTFKNIWGSSKSANAVTLRCSKSKPCKNIVLDNINLTSYPNVGQLFSSCFHVHGFSYGNQSP
                                      SSR+QIS VTFKNIWGSSKSA+AVTLRCSK KPCKNIVLDNINL S P+VGQLFSSCFHVHGFSYGNQSP
Subjt:  -----------------------------GSSRVQISNVTFKNIWGSSKSANAVTLRCSKSKPCKNIVLDNINLTSYPNVGQLFSSCFHVHGFSYGNQSP

Query:  YSCL
        YSCL
Subjt:  YSCL

A0A5D3CYK2 Exopolygalacturonase4.8e-9449.5Show/hide
Query:  MGLKKCCVFKVFLVGFFLFSIKELEARNH-VDKPKFFNVVNYGAIPDGTTDNSKAFLEAWNDACEWKGRGRVYVPKGTFKLGEVLFLGPCEGQMAFVMKG
        MGLKKC VF++FL+G  LFSI+ELEA N+   KPKFFNVVNYGAIPDG TDNSKAFL+AWNDACEWKGRGRVYVPKGTFKLGEVLFLGPCEG  AF++KG
Subjt:  MGLKKCCVFKVFLVGFFLFSIKELEARNH-VDKPKFFNVVNYGAIPDGTTDNSKAFLEAWNDACEWKGRGRVYVPKGTFKLGEVLFLGPCEGQMAFVMKG

Query:  ILKAPTDMSSLYGDSWINFRYVDWLTVSGGGSLDGQGAMAWPRNECKKNPNCQSLPT-------------------------------------------
        ILKA TDMSSLYGDSWINFRYVD LTV GGGSLDGQGA+AWPRN+CK NPNCQSLPT                                           
Subjt:  ILKAPTDMSSLYGDSWINFRYVDWLTVSGGGSLDGQGAMAWPRNECKKNPNCQSLPT-------------------------------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  -----------------------------GSSRVQISNVTFKNIWGSSKSANAVTLRCSKSKPCKNIVLDNINLTSYPNVGQLFSSCFHVHGFSYGNQSP
                                      SSR+QIS VTFKNIWGSSKSA+AVTLRCSK KPCKNIVLDNINL S P+VGQLFSSCFHVHGFSYGNQSP
Subjt:  -----------------------------GSSRVQISNVTFKNIWGSSKSANAVTLRCSKSKPCKNIVLDNINLTSYPNVGQLFSSCFHVHGFSYGNQSP

Query:  YSCL
        YSCL
Subjt:  YSCL

A0A6J1FVW3 exopolygalacturonase-like5.3e-7744.53Show/hide
Query:  MGLKKCCVFKVFLVGFFLFSIKELEARNHVDKPKFFNVVNYGAIPDGTTDNSKAFLEAWNDACEWKGRGRVYVPKGTFKLGEVLFLGPCEGQMAFVMKGI
        MGLKKC V +   V FFLF     E    V +PK FNVV YGAIPDGTTDNSKAFLEAW DACEWKGRGRVYVPKGTFKL  VLFLGPCEGQMAFV+KGI
Subjt:  MGLKKCCVFKVFLVGFFLFSIKELEARNHVDKPKFFNVVNYGAIPDGTTDNSKAFLEAWNDACEWKGRGRVYVPKGTFKLGEVLFLGPCEGQMAFVMKGI

Query:  LKAPTDMSSLYGDSWINFRYVDWLTVSGGGSLDGQGAMAWPRNECKKNPNCQSLPT--------------------------------------------
        LKAPTDMS L  DSWINFRYVD L+VSGGGSLDG+G++AWPRNECKKNPNCQSLPT                                            
Subjt:  LKAPTDMSSLYGDSWINFRYVDWLTVSGGGSLDGQGAMAWPRNECKKNPNCQSLPT--------------------------------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  ---------------------------GSSRVQISNVTFKNIWGSSKSANAVTLRCSKSKPCKNIVLDNINLTSYPNVGQLFSSCFHVHGFSYGNQSPYS
                                    SS VQISNVTFKNIWG SKSA+AVTLRCSK++PCK+IVL++I+L S P VGQ+FSSC +V+GFSYG QSP  
Subjt:  ---------------------------GSSRVQISNVTFKNIWGSSKSANAVTLRCSKSKPCKNIVLDNINLTSYPNVGQLFSSCFHVHGFSYGNQSPYS

Query:  CL
        CL
Subjt:  CL

A0A6J1J1C3 exopolygalacturonase-like1.3e-7544.03Show/hide
Query:  MGLKKCCVFKVFLVGFFLFSIKELEARNHVDKPKFFNVVNYGAIPDGTTDNSKAFLEAWNDACEWKGRGRVYVPKGTFKLGEVLFLGPCEGQMAFVMKGI
        MGLKKC V +   V FFLF +  +     V + K FNVV YGAIPDGTTDNS+AFLEAW DACEWKGRGRVYVPKGTFKL  VLFLGPCEGQMAFV+KGI
Subjt:  MGLKKCCVFKVFLVGFFLFSIKELEARNHVDKPKFFNVVNYGAIPDGTTDNSKAFLEAWNDACEWKGRGRVYVPKGTFKLGEVLFLGPCEGQMAFVMKGI

Query:  LKAPTDMSSLYGDSWINFRYVDWLTVSGGGSLDGQGAMAWPRNECKKNPNCQSLPTG-------------------------------------------
        LKAPTDMS L  DSW+NFRYVD LTVSGGGSLDG+G++AWPRNECKKNPNCQSLPT                                            
Subjt:  LKAPTDMSSLYGDSWINFRYVDWLTVSGGGSLDGQGAMAWPRNECKKNPNCQSLPTG-------------------------------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  ----------------------------SSRVQISNVTFKNIWGSSKSANAVTLRCSKSKPCKNIVLDNINLTSYPNVGQLFSSCFHVHGFSYGNQSPYS
                                    SS VQISNVTFKNIWGSSKSA+AVTLRCSK++PCK+IVL++I L S P VGQ+FSSC +V+GFSYG QSP  
Subjt:  ----------------------------SSRVQISNVTFKNIWGSSKSANAVTLRCSKSKPCKNIVLDNINLTSYPNVGQLFSSCFHVHGFSYGNQSPYS

Query:  CL
        CL
Subjt:  CL

SwissProt top hitse value%identityAlignment
P26216 Exopolygalacturonase9.5e-2334.86Show/hide
Query:  FNVVNYGAIPDGTTDNSKAFLEAWNDACEWKGRGRVYVPKGTFKLGEVLFLGPCEGQMAFVMKGILKAPTDMSSLYGD--SWINFRYVDWLTVSGGGSLD
        F++   GA  +G TD++KA  EAW  AC   G+  + +PKG F +G++ F GPC+G +   + G L A TD+S  Y D  +WI    VD L ++G G+LD
Subjt:  FNVVNYGAIPDGTTDNSKAFLEAWNDACEWKGRGRVYVPKGTFKLGEVLFLGPCEGQMAFVMKGILKAPTDMSSLYGD--SWINFRYVDWLTVSGGGSLD

Query:  GQGAMAWPRNECKKNPNCQSLPTG-----SSRVQISNVTFKNIWGSSKSANAVTLRCSKSKPCKNIVLDNINLTS
        GQG   W +N C K  +C+ LP        +  ++S VT  N    SK  +    R      CK++++ ++ +T+
Subjt:  GQGAMAWPRNECKKNPNCQSLPTG-----SSRVQISNVTFKNIWGSSKSANAVTLRCSKSKPCKNIVLDNINLTS

P35338 Exopolygalacturonase9.5e-2333.91Show/hide
Query:  FNVVNYGAIPDGTTDNSKAFLEAWNDACEWKGRGRVYVPKGTFKLGEVLFLGPCEGQMAFVMKGILKAPTDMSSL-YGDSWINFRYVDWLTVSGGGSLDG
        F++   GA  +G TD++KA  EAW  AC   G+  + +PKG F +G++ F GPC+G +   + G L A TD+S      +WI    VD L ++G G+LDG
Subjt:  FNVVNYGAIPDGTTDNSKAFLEAWNDACEWKGRGRVYVPKGTFKLGEVLFLGPCEGQMAFVMKGILKAPTDMSSL-YGDSWINFRYVDWLTVSGGGSLDG

Query:  QGAMAWPRNECKKNPNCQSLPTGSSRVQISNVTFKNIWGSSKSANAVTLRCSK-----SKPCKNIVLDNINLTS
        QG   W +N C K  +C+ LP       ++N             + VTL  SK        CKN+++ ++ +T+
Subjt:  QGAMAWPRNECKKNPNCQSLPTGSSRVQISNVTFKNIWGSSKSANAVTLRCSK-----SKPCKNIVLDNINLTS

P35339 Exopolygalacturonase1.2e-2234.29Show/hide
Query:  FNVVNYGAIPDGTTDNSKAFLEAWNDACEWKGRGRVYVPKGTFKLGEVLFLGPCEGQMAFVMKGILKAPTDMSSLYGD--SWINFRYVDWLTVSGGGSLD
        F++   GA  +G TD++KA  EAW  AC   G+  + +PKG F +G + F GPC+G +   + G L A TD+S  Y D  +WI    VD L ++G G LD
Subjt:  FNVVNYGAIPDGTTDNSKAFLEAWNDACEWKGRGRVYVPKGTFKLGEVLFLGPCEGQMAFVMKGILKAPTDMSSLYGD--SWINFRYVDWLTVSGGGSLD

Query:  GQGAMAWPRNECKKNPNCQSLPTGSSRVQISNVTFKNIWGSSKSANAVTLRCSK-----SKPCKNIVLDNINLTS
        GQG   W +N C K  +C+ LP       ++N             + +TL  SK        CK++++ ++N+T+
Subjt:  GQGAMAWPRNECKKNPNCQSLPTGSSRVQISNVTFKNIWGSSKSANAVTLRCSK-----SKPCKNIVLDNINLTS

Q05967 Polygalacturonase9.5e-2332.83Show/hide
Query:  FKVFLVGFFLFSIKELEARNHVDKPKFFNVVNYGAIPDGTTDNSKAFLEAWNDACEWKGRGRVYVPKGTFKLGEVLFLGPCEGQMAFVMKGILKAPTDMS
        FKV      LF     E++  V     F++  YGA  +   D S+A L A+ +AC+      + +PKGTF + +V   GPC+  +   ++  LKAP+D S
Subjt:  FKVFLVGFFLFSIKELEARNHVDKPKFFNVVNYGAIPDGTTDNSKAFLEAWNDACEWKGRGRVYVPKGTFKLGEVLFLGPCEGQMAFVMKGILKAPTDMS

Query:  SLYGDSWINFRYVDWLTVSGGGSLDGQGAMAWPRNECKKNPNCQSLPTGSSRVQISNVTFKNIWGSSKSANAVTLRCSKSKPCKNIVLDNINLTSYPN
         L    W+    +D  T+SGGG LDGQ A AW   ECK++  C  LP   S   ++N T K+I      +  V +       CKN+     N+++  N
Subjt:  SLYGDSWINFRYVDWLTVSGGGSLDGQGAMAWPRNECKKNPNCQSLPTGSSRVQISNVTFKNIWGSSKSANAVTLRCSKSKPCKNIVLDNINLTSYPN

Q6H9K0 Exopolygalacturonase (Fragment)7.5e-2848.31Show/hide
Query:  FNVVNYGAIPDGTTDNSKAFLEAWNDACEWKGRGRVYVPKGTFKLGEVLFLGPCEG-QMAFVMKGILKAPTDMSSLYGDSWINFRYVDWLTVSGGGSLDG
        FNV +YGA   G  D S+A ++AW  AC  +G   V +PKG + +GEV   GPC+G ++ F + G++KAP D S    D W++F  +D LTVSG G+LDG
Subjt:  FNVVNYGAIPDGTTDNSKAFLEAWNDACEWKGRGRVYVPKGTFKLGEVLFLGPCEG-QMAFVMKGILKAPTDMSSLYGDSWINFRYVDWLTVSGGGSLDG

Query:  QGAMAWPRNECKKNPNCQ
        QG  AW +N C KNPNC+
Subjt:  QGAMAWPRNECKKNPNCQ

Q6H9K0 Exopolygalacturonase (Fragment)6.8e-0537.68Show/hide
Query:  SRVQISNVTFKNIWGSSKSANAVTLRCSKSKPCKNIVLDNINLTSYPNVGQLFSSCFHVHGFSYGNQSP
        SR+++SN+ F NI G+S    AV + CS   PC N+ +  INL+     G   S+C +V     G Q P
Subjt:  SRVQISNVTFKNIWGSSKSANAVTLRCSKSKPCKNIVLDNINLTSYPNVGQLFSSCFHVHGFSYGNQSP

Arabidopsis top hitse value%identityAlignment
AT1G78400.1 Pectin lyase-like superfamily protein4.6e-4155.15Show/hide
Query:  KFFNVVNYGAIPDGTTDNSKAFLEAWNDACEWKGRGRVYVPKGTFKLGEVLFLGPCEGQMAFVMKGILKAPTDMSSLYGDSWINFRYVDWLTVSGGGSLD
        K F+V +YGA  DG TDN+ AF +AW DAC+WKG  RVY+P GTF LG V F GPC+ +++F++KG L AP D +++  DSWI FRYVD+LTVSGGG LD
Subjt:  KFFNVVNYGAIPDGTTDNSKAFLEAWNDACEWKGRGRVYVPKGTFKLGEVLFLGPCEGQMAFVMKGILKAPTDMSSLYGDSWINFRYVDWLTVSGGGSLD

Query:  GQGAMAWPRNECKKNPNCQSLP--TGSSRVQISNVT
        GQG+ +WP N C++  NC++LP   G   V+ S +T
Subjt:  GQGAMAWPRNECKKNPNCQSLP--TGSSRVQISNVT

AT1G78400.1 Pectin lyase-like superfamily protein1.3e-1144.05Show/hide
Query:  NPNCQSLPTGSSRVQISNVTFKNIWGSSKSANAVTLRCSKSKPCKNIVLDNINLTSYPNVGQLFSSCFHVHGFSYGNQSPYSCL
        NP C       S++QI +V F+NIWG+S +  AV L+CSK+ PCKN+ L NIN+      G   S C +V G+  G  SP SC+
Subjt:  NPNCQSLPTGSSRVQISNVTFKNIWGSSKSANAVTLRCSKSKPCKNIVLDNINLTSYPNVGQLFSSCFHVHGFSYGNQSPYSCL

AT2G15450.1 Pectin lyase-like superfamily protein3.1e-3744.31Show/hide
Query:  CCVFKVFLVGFFLFSIKELEARNHVDKPKFFNVVNYGAIPDGTTDNSKAFLEAWNDACE-WKGRGRVYVPKGTFKLGEVLFLGPCEGQMAFVMKGILKAP
        C  F    + F LF I  + A     +PK FNV  +GA PDG TDN+ AF   W+ AC+   G  ++YVPKGTF LG V F+GPC+  + F++ G L AP
Subjt:  CCVFKVFLVGFFLFSIKELEARNHVDKPKFFNVVNYGAIPDGTTDNSKAFLEAWNDACE-WKGRGRVYVPKGTFKLGEVLFLGPCEGQMAFVMKGILKAP

Query:  TDMSSLYGDSWINFRYVDWLTVSGGGSLDGQGAMAWPRNECKKNPNCQSLPTGSSRVQISNVTFKNI
         + S +  D+WINFRY++ L++SG G+LDGQG  +WP N+C  NPNC  L        ++N   K+I
Subjt:  TDMSSLYGDSWINFRYVDWLTVSGGGSLDGQGAMAWPRNECKKNPNCQSLPTGSSRVQISNVTFKNI

AT2G15450.1 Pectin lyase-like superfamily protein8.6e-1143.53Show/hide
Query:  NPNCQSLPTGSSRVQISNVTFKNIWGSSKSANAVTLRCSKSKPCKNIVLDNINL-TSYPNVGQLFSSCFHVHGFSYGNQSPYSCL
        +P C+    G S VQI N+  KNI+G+SK+  AV L+CSK  PCKN+ L +IN+  +    G   S C +V GF+ G   P  CL
Subjt:  NPNCQSLPTGSSRVQISNVTFKNIWGSSKSANAVTLRCSKSKPCKNIVLDNINL-TSYPNVGQLFSSCFHVHGFSYGNQSPYSCL

AT2G15460.1 Pectin lyase-like superfamily protein3.1e-3744.31Show/hide
Query:  CCVFKVFLVGFFLFSIKELEARNHVDKPKFFNVVNYGAIPDGTTDNSKAFLEAWNDACE-WKGRGRVYVPKGTFKLGEVLFLGPCEGQMAFVMKGILKAP
        C  F    + F LF I  + A     +PK FNV  +GA PDG TDN+ AF   W+ AC+   G  ++YVPKGTF LG V F+GPC+  + F++ G L AP
Subjt:  CCVFKVFLVGFFLFSIKELEARNHVDKPKFFNVVNYGAIPDGTTDNSKAFLEAWNDACE-WKGRGRVYVPKGTFKLGEVLFLGPCEGQMAFVMKGILKAP

Query:  TDMSSLYGDSWINFRYVDWLTVSGGGSLDGQGAMAWPRNECKKNPNCQSLPTGSSRVQISNVTFKNI
         + S +  D+WINFRY++ L++SG G+LDGQG  +WP N+C  NPNC  L        ++N   K+I
Subjt:  TDMSSLYGDSWINFRYVDWLTVSGGGSLDGQGAMAWPRNECKKNPNCQSLPTGSSRVQISNVTFKNI

AT2G15460.1 Pectin lyase-like superfamily protein7.2e-1043.21Show/hide
Query:  NPNCQSLPTGSSRVQISNVTFKNIWGSSKSANAVTLRCSKSKPCKNIVLDNINL-TSYPNVGQLFSSCFHVHGFSYGNQSP
        +P C+    G S VQI N+  KNI+G+SK+  AV L+CSK  PCKN+ L +IN+  +    G   S C +V GF+ G   P
Subjt:  NPNCQSLPTGSSRVQISNVTFKNIWGSSKSANAVTLRCSKSKPCKNIVLDNINL-TSYPNVGQLFSSCFHVHGFSYGNQSP

AT2G26620.1 Pectin lyase-like superfamily protein6.9e-3746.81Show/hide
Query:  KPKFFNVVNYGAIPDGTTDNSKAFLEAWNDACE-WKGRGRVYVPKGTFKLGEVLFLGPCEGQMAFVMKGILKAPTDMSSLYGDSWINFRYVDWLTVSGGG
        +PK FNV  +G+ PDG TDN+ AF   W+ AC+   G  ++YVPKGTF LG V F+GPC+  + F++ G L AP + + +  D+WINFRY++ L++SG G
Subjt:  KPKFFNVVNYGAIPDGTTDNSKAFLEAWNDACE-WKGRGRVYVPKGTFKLGEVLFLGPCEGQMAFVMKGILKAPTDMSSLYGDSWINFRYVDWLTVSGGG

Query:  SLDGQGAMAWPRNECKKNPNCQSLPTGSSRVQISNVTFKNI
        +LDGQG  +WP N+C KNPNC  L        ++N   K+I
Subjt:  SLDGQGAMAWPRNECKKNPNCQSLPTGSSRVQISNVTFKNI

AT2G40310.1 Pectin lyase-like superfamily protein2.0e-3644.24Show/hide
Query:  VFKVFLVGFFLFSIKELEARNHVDKPKFFNVVNYGAIPDGTTDNSKAFLEAWNDACEWK-GRGRVYVPKGTFKLGEVLFLGPCEGQMAFVMKGILKAPTD
        VFKV  V F    +    A     +PK FNV  +G+ PDG TDN+  F   W+ AC+ K G  ++YVPKG F LG V F+GPC+  + FV+ G L AP +
Subjt:  VFKVFLVGFFLFSIKELEARNHVDKPKFFNVVNYGAIPDGTTDNSKAFLEAWNDACEWK-GRGRVYVPKGTFKLGEVLFLGPCEGQMAFVMKGILKAPTD

Query:  MSSLYGDSWINFRYVDWLTVSGGGSLDGQGAMAWPRNECKKNPNCQSLPTGSSRVQISNVTFKNI
         S +  D+WINFRY++ L++SG G+LDGQG  +WP N+C KN NC  L        ++N   K+I
Subjt:  MSSLYGDSWINFRYVDWLTVSGGGSLDGQGAMAWPRNECKKNPNCQSLPTGSSRVQISNVTFKNI

AT2G40310.1 Pectin lyase-like superfamily protein1.6e-0941.18Show/hide
Query:  NPNCQSLPTGSSRVQISNVTFKNIWGSSKSANAVTLRCSKSKPCKNIVLDNINLTSYP-NVGQLFSSCFHVHGFSYGNQSPYSCL
        +P C+    G S VQI ++  KNI+G+SK+  A+ L+CSKS PCKNI L +IN+ S         + C +V G   G   P  CL
Subjt:  NPNCQSLPTGSSRVQISNVTFKNIWGSSKSANAVTLRCSKSKPCKNIVLDNINLTSYP-NVGQLFSSCFHVHGFSYGNQSPYSCL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTTTAAAGAAATGTTGTGTTTTTAAGGTTTTTTTGGTTGGTTTCTTCTTGTTTTCCATCAAAGAATTAGAAGCTCGTAATCATGTTGACAAACCTAAATTCTTCAA
TGTTGTCAACTATGGAGCTATCCCAGATGGCACAACAGATAACTCTAAGGCATTTTTAGAGGCATGGAATGATGCATGTGAATGGAAGGGGAGGGGTAGGGTATATGTCC
CAAAAGGAACATTCAAATTGGGAGAAGTGCTTTTTTTGGGACCATGTGAAGGGCAAATGGCCTTTGTGATGAAGGGCATTCTAAAGGCTCCAACCGACATGTCGTCTCTC
TATGGTGACAGTTGGATCAATTTTCGATATGTCGATTGGTTGACTGTTAGTGGAGGTGGTTCATTGGATGGTCAAGGAGCTATGGCTTGGCCAAGAAATGAGTGCAAAAA
AAACCCTAATTGCCAATCTCTTCCCACGGGATCTTCAAGGGTGCAAATAAGCAATGTGACATTCAAAAACATATGGGGAAGCAGCAAATCAGCAAATGCAGTGACATTGA
GATGCAGCAAAAGTAAGCCATGCAAGAACATAGTGCTTGACAATATTAATCTCACAAGCTATCCAAATGTAGGACAACTTTTTTCTTCTTGCTTTCATGTTCATGGCTTC
TCTTATGGCAATCAAAGCCCTTATTCTTGCTTGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGGTTTAAAGAAATGTTGTGTTTTTAAGGTTTTTTTGGTTGGTTTCTTCTTGTTTTCCATCAAAGAATTAGAAGCTCGTAATCATGTTGACAAACCTAAATTCTTCAA
TGTTGTCAACTATGGAGCTATCCCAGATGGCACAACAGATAACTCTAAGGCATTTTTAGAGGCATGGAATGATGCATGTGAATGGAAGGGGAGGGGTAGGGTATATGTCC
CAAAAGGAACATTCAAATTGGGAGAAGTGCTTTTTTTGGGACCATGTGAAGGGCAAATGGCCTTTGTGATGAAGGGCATTCTAAAGGCTCCAACCGACATGTCGTCTCTC
TATGGTGACAGTTGGATCAATTTTCGATATGTCGATTGGTTGACTGTTAGTGGAGGTGGTTCATTGGATGGTCAAGGAGCTATGGCTTGGCCAAGAAATGAGTGCAAAAA
AAACCCTAATTGCCAATCTCTTCCCACGGGATCTTCAAGGGTGCAAATAAGCAATGTGACATTCAAAAACATATGGGGAAGCAGCAAATCAGCAAATGCAGTGACATTGA
GATGCAGCAAAAGTAAGCCATGCAAGAACATAGTGCTTGACAATATTAATCTCACAAGCTATCCAAATGTAGGACAACTTTTTTCTTCTTGCTTTCATGTTCATGGCTTC
TCTTATGGCAATCAAAGCCCTTATTCTTGCTTGTAA
Protein sequenceShow/hide protein sequence
MGLKKCCVFKVFLVGFFLFSIKELEARNHVDKPKFFNVVNYGAIPDGTTDNSKAFLEAWNDACEWKGRGRVYVPKGTFKLGEVLFLGPCEGQMAFVMKGILKAPTDMSSL
YGDSWINFRYVDWLTVSGGGSLDGQGAMAWPRNECKKNPNCQSLPTGSSRVQISNVTFKNIWGSSKSANAVTLRCSKSKPCKNIVLDNINLTSYPNVGQLFSSCFHVHGF
SYGNQSPYSCL