CuGenDBv2

Gene ID	HG10002623
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	Synaptojanin-1
Genome location	Chr11:9100897..9102937
RNA-Seq Expression	HG10002623
Synteny	HG10002623
Gene Ontology terms	GO:0016021 - integral component of membrane (cellular component)
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

KAA0039065.1 synaptojanin-1 [Cucumis melo var. makuwa]

5.6e-64

89.63

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Query:  MGKGEEQNLPLQQRREVAPSGDSSGFLCGQCSIGFHRVCKELNFKCFFVLILGFVVFVPGFFWLLPLHERNSGFEAKDTIKLSATVQVYFVLEKPVTELL
        MGKGEEQNLPLQQRREVA SGDSSGFLCGQCSI FHRVCKELNFKCFFVL+LGFVVFVPG FWLLPLHERNSGFEAK+ +KLSATVQVYFVLEKPVTELL
Subjt:  MGKGEEQNLPLQQRREVAPSGDSSGFLCGQCSIGFHRVCKELNFKCFFVLILGFVVFVPGFFWLLPLHERNSGFEAKDTIKLSATVQVYFVLEKPVTELL

Query:  PHIKRLEFDINGELDIPNLKVSILSMHDLAESRKS
        PHIKRLEFDINGELDIP++KVSILSMHD+ ES ++
Subjt:  PHIKRLEFDINGELDIPNLKVSILSMHDLAESRKS

XP_004149972.2 uncharacterized protein LOC101222031 isoform X2 [Cucumis sativus]

1.7e-65

91.85

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Query:  MGKGEEQNLPLQQRREVAPSGDSSGFLCGQCSIGFHRVCKELNFKCFFVLILGFVVFVPGFFWLLPLHERNSGFEAKDTIKLSATVQVYFVLEKPVTELL
        MGKGEEQNLPLQQRREVA +GDSSGFLCGQCSI FHRVCKELNFKCFFVL+LGFVVFVPGFFWLLPLHERNSGFEAKD IKLSATVQVYFVLEKPVTELL
Subjt:  MGKGEEQNLPLQQRREVAPSGDSSGFLCGQCSIGFHRVCKELNFKCFFVLILGFVVFVPGFFWLLPLHERNSGFEAKDTIKLSATVQVYFVLEKPVTELL

Query:  PHIKRLEFDINGELDIPNLKVSILSMHDLAESRKS
        PHIKRLEFDINGELDIPN+KVSILSMHD+ ES ++
Subjt:  PHIKRLEFDINGELDIPNLKVSILSMHDLAESRKS

XP_008456084.1 PREDICTED: uncharacterized protein LOC103496125 isoform X1 [Cucumis melo]

5.6e-64

89.63

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Query:  MGKGEEQNLPLQQRREVAPSGDSSGFLCGQCSIGFHRVCKELNFKCFFVLILGFVVFVPGFFWLLPLHERNSGFEAKDTIKLSATVQVYFVLEKPVTELL
        MGKGEEQNLPLQQRREVA SGDSSGFLCGQCSI FHRVCKELNFKCFFVL+LGFVVFVPG FWLLPLHERNSGFEAK+ +KLSATVQVYFVLEKPVTELL
Subjt:  MGKGEEQNLPLQQRREVAPSGDSSGFLCGQCSIGFHRVCKELNFKCFFVLILGFVVFVPGFFWLLPLHERNSGFEAKDTIKLSATVQVYFVLEKPVTELL

Query:  PHIKRLEFDINGELDIPNLKVSILSMHDLAESRKS
        PHIKRLEFDINGELDIP++KVSILSMHD+ ES ++
Subjt:  PHIKRLEFDINGELDIPNLKVSILSMHDLAESRKS

XP_011651267.1 uncharacterized protein LOC101222031 isoform X1 [Cucumis sativus]

1.7e-65

91.85

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Query:  MGKGEEQNLPLQQRREVAPSGDSSGFLCGQCSIGFHRVCKELNFKCFFVLILGFVVFVPGFFWLLPLHERNSGFEAKDTIKLSATVQVYFVLEKPVTELL
        MGKGEEQNLPLQQRREVA +GDSSGFLCGQCSI FHRVCKELNFKCFFVL+LGFVVFVPGFFWLLPLHERNSGFEAKD IKLSATVQVYFVLEKPVTELL
Subjt:  MGKGEEQNLPLQQRREVAPSGDSSGFLCGQCSIGFHRVCKELNFKCFFVLILGFVVFVPGFFWLLPLHERNSGFEAKDTIKLSATVQVYFVLEKPVTELL

Query:  PHIKRLEFDINGELDIPNLKVSILSMHDLAESRKS
        PHIKRLEFDINGELDIPN+KVSILSMHD+ ES ++
Subjt:  PHIKRLEFDINGELDIPNLKVSILSMHDLAESRKS

XP_038891823.1 uncharacterized protein LOC120081196 isoform X1 [Benincasa hispida]

1.2e-63

90.37

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Query:  MGKGEEQNLPLQQRREVAPSGDSSGFLCGQCSIGFHRVCKELNFKCFFVLILGFVVFVPGFFWLLPLHERNSGFEAKDTIKLSATVQVYFVLEKPVTELL
        MGKGEEQNLPLQQRR+VAPSGDSSGFLCGQCSI FHRV  E NFKCFFVLILGFVVFVPGFFWLLPLHERNSGFEAKDTIKL AT QVYFVL+KPV ELL
Subjt:  MGKGEEQNLPLQQRREVAPSGDSSGFLCGQCSIGFHRVCKELNFKCFFVLILGFVVFVPGFFWLLPLHERNSGFEAKDTIKLSATVQVYFVLEKPVTELL

Query:  PHIKRLEFDINGELDIPNLKVSILSMHDLAESRKS
        PHIKRLEFDINGELDIPNLKVSILSMHDL ES ++
Subjt:  PHIKRLEFDINGELDIPNLKVSILSMHDLAESRKS

TrEMBL top hits

e value

%identity

Alignment

A0A0A0L6J0 Uncharacterized protein

8.4e-66

91.85

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Query:  MGKGEEQNLPLQQRREVAPSGDSSGFLCGQCSIGFHRVCKELNFKCFFVLILGFVVFVPGFFWLLPLHERNSGFEAKDTIKLSATVQVYFVLEKPVTELL
        MGKGEEQNLPLQQRREVA +GDSSGFLCGQCSI FHRVCKELNFKCFFVL+LGFVVFVPGFFWLLPLHERNSGFEAKD IKLSATVQVYFVLEKPVTELL
Subjt:  MGKGEEQNLPLQQRREVAPSGDSSGFLCGQCSIGFHRVCKELNFKCFFVLILGFVVFVPGFFWLLPLHERNSGFEAKDTIKLSATVQVYFVLEKPVTELL

Query:  PHIKRLEFDINGELDIPNLKVSILSMHDLAESRKS
        PHIKRLEFDINGELDIPN+KVSILSMHD+ ES ++
Subjt:  PHIKRLEFDINGELDIPNLKVSILSMHDLAESRKS

A0A1S3C2E0 uncharacterized protein LOC103496125 isoform X1

2.7e-64

89.63

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Query:  MGKGEEQNLPLQQRREVAPSGDSSGFLCGQCSIGFHRVCKELNFKCFFVLILGFVVFVPGFFWLLPLHERNSGFEAKDTIKLSATVQVYFVLEKPVTELL
        MGKGEEQNLPLQQRREVA SGDSSGFLCGQCSI FHRVCKELNFKCFFVL+LGFVVFVPG FWLLPLHERNSGFEAK+ +KLSATVQVYFVLEKPVTELL
Subjt:  MGKGEEQNLPLQQRREVAPSGDSSGFLCGQCSIGFHRVCKELNFKCFFVLILGFVVFVPGFFWLLPLHERNSGFEAKDTIKLSATVQVYFVLEKPVTELL

Query:  PHIKRLEFDINGELDIPNLKVSILSMHDLAESRKS
        PHIKRLEFDINGELDIP++KVSILSMHD+ ES ++
Subjt:  PHIKRLEFDINGELDIPNLKVSILSMHDLAESRKS

A0A1S4E116 uncharacterized protein LOC103496125 isoform X2

7.6e-59

89.68

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Query:  MGKGEEQNLPLQQRREVAPSGDSSGFLCGQCSIGFHRVCKELNFKCFFVLILGFVVFVPGFFWLLPLHERNSGFEAKDTIKLSATVQVYFVLEKPVTELL
        MGKGEEQNLPLQQRREVA SGDSSGFLCGQCSI FHRVCKELNFKCFFVL+LGFVVFVPG FWLLPLHERNSGFEAK+ +KLSATVQVYFVLEKPVTELL
Subjt:  MGKGEEQNLPLQQRREVAPSGDSSGFLCGQCSIGFHRVCKELNFKCFFVLILGFVVFVPGFFWLLPLHERNSGFEAKDTIKLSATVQVYFVLEKPVTELL

Query:  PHIKRLEFDINGELDIPNLKVSILSM
        PHIKRLEFDINGELDIP++K S L +
Subjt:  PHIKRLEFDINGELDIPNLKVSILSM

A0A5A7TCD6 Synaptojanin-1

2.7e-64

89.63

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Query:  MGKGEEQNLPLQQRREVAPSGDSSGFLCGQCSIGFHRVCKELNFKCFFVLILGFVVFVPGFFWLLPLHERNSGFEAKDTIKLSATVQVYFVLEKPVTELL
        MGKGEEQNLPLQQRREVA SGDSSGFLCGQCSI FHRVCKELNFKCFFVL+LGFVVFVPG FWLLPLHERNSGFEAK+ +KLSATVQVYFVLEKPVTELL
Subjt:  MGKGEEQNLPLQQRREVAPSGDSSGFLCGQCSIGFHRVCKELNFKCFFVLILGFVVFVPGFFWLLPLHERNSGFEAKDTIKLSATVQVYFVLEKPVTELL

Query:  PHIKRLEFDINGELDIPNLKVSILSMHDLAESRKS
        PHIKRLEFDINGELDIP++KVSILSMHD+ ES ++
Subjt:  PHIKRLEFDINGELDIPNLKVSILSMHDLAESRKS

A0A6J1D566 uncharacterized protein LOC111017707

2.9e-58

84.44

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Query:  MGKGEEQNLPLQQRREVAPSGDSSGFLCGQCSIGFHRVCKELNFKCFFVLILGFVVFVPGFFWLLPLHERNSGFEAKDTIKLSATVQVYFVLEKPVTELL
        MGKGEEQNLP+Q+RREVA SGDSSGFLCGQCSI   RV +ELNFKC FVLILGF+VFVPGFFWLLPL ERNSGFEAKD IKLSATVQVYFVLEKPV ELL
Subjt:  MGKGEEQNLPLQQRREVAPSGDSSGFLCGQCSIGFHRVCKELNFKCFFVLILGFVVFVPGFFWLLPLHERNSGFEAKDTIKLSATVQVYFVLEKPVTELL

Query:  PHIKRLEFDINGELDIPNLKVSILSMHDLAESRKS
        PHIKRLEFDINGELDI N+KVS+LSMHD+ ES ++
Subjt:  PHIKRLEFDINGELDIPNLKVSILSMHDLAESRKS

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT1G10790.1 BEST Arabidopsis thaliana protein match is: hydroxyproline-rich glycoprotein family protein (TAIR:AT3G56590.2)

1.2e-11

34.62

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Query:  EEQNLPLQQRREVAPSGDSSGFLCGQ-CSIGFHRVCKELNFKCFFVLILGFVVFVPGFFWLLPLHERNSGFEAKDTIKLSATVQVYFVLEKPVTELLPHI
        +E  L LQQ      + +SS    G+ CS  F R+   +  +C  VL+L   + +   FWL P     S F+A  T+KL+A+VQ  F L+KPV+E++ H 
Subjt:  EEQNLPLQQRREVAPSGDSSGFLCGQ-CSIGFHRVCKELNFKCFFVLILGFVVFVPGFFWLLPLHERNSGFEAKDTIKLSATVQVYFVLEKPVTELLPHI

Query:  KRLEFDINGELDIP-NLKVSILSMHDLAES
         ++E DI   + +  N KV++LS++    S
Subjt:  KRLEFDINGELDIP-NLKVSILSMHDLAES

Sequences

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CDS sequence

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ATGGGGAAAGGGGAAGAGCAAAATCTGCCGTTGCAGCAGCGTCGTGAGGTGGCTCCAAGTGGGGATTCTTCCGGGTTTCTTTGTGGTCAATGTTCTATTGGTTTTCATAG
AGTTTGTAAAGAGTTGAATTTCAAGTGTTTCTTCGTTTTGATTTTGGGGTTTGTGGTGTTTGTCCCTGGATTCTTTTGGCTTCTTCCTCTTCATGAAAGAAATTCAGGGT
TTGAGGCGAAAGACACCATTAAACTCTCTGCTACAGTTCAGGTATATTTTGTTCTTGAAAAGCCCGTGACCGAGCTTCTCCCTCACATCAAGAGATTAGAGTTTGATATC
AATGGTGAATTAGACATTCCAAACTTGAAGGTTTCCATTCTATCCATGCATGATTTAGCTGAGAGCAGAAAGAGCATACCTGATCCTTGTAGGCGTGGTTTCAAGTTGAA
AATGAAAATGGTTGAACCAGCTCCAGTCTTCAAGTGA

mRNA sequence

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Protein sequence

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MGKGEEQNLPLQQRREVAPSGDSSGFLCGQCSIGFHRVCKELNFKCFFVLILGFVVFVPGFFWLLPLHERNSGFEAKDTIKLSATVQVYFVLEKPVTELLPHIKRLEFDI
NGELDIPNLKVSILSMHDLAESRKSIPDPCRRGFKLKMKMVEPAPVFK

HG10002623 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome