; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

HG10002645 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10002645
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionUbiquitin-conjugating enzyme
Genome locationChr11:9353553..9356369
RNA-Seq ExpressionHG10002645
SyntenyHG10002645
Gene Ontology termsGO:0006301 - postreplication repair (biological process)
GO:0006511 - ubiquitin-dependent protein catabolic process (biological process)
GO:0010039 - response to iron ion (biological process)
GO:0010053 - root epidermal cell differentiation (biological process)
GO:0070534 - protein K63-linked ubiquitination (biological process)
GO:0005634 - nucleus (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0031372 - UBC13-MMS2 complex (cellular component)
GO:0005524 - ATP binding (molecular function)
GO:0016874 - ligase activity (molecular function)
GO:0061631 - ubiquitin conjugating enzyme activity (molecular function)
InterPro domainsIPR000608 - Ubiquitin-conjugating enzyme E2
IPR016135 - Ubiquitin-conjugating enzyme/RWD-like
IPR023313 - Ubiquitin-conjugating enzyme, active site


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF5460918.1 hypothetical protein F2P56_020754, partial [Juglans regia]5.2e-5697.32Show/hide
Query:  MRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKT
        MRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKT
Subjt:  MRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKT

Query:  NEAEAVETGELV
        NEAEAVETG  +
Subjt:  NEAEAVETGELV

KAF5460920.1 hypothetical protein F2P56_020755 [Juglans regia]1.8e-5698.21Show/hide
Query:  MRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKT
        MRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKT
Subjt:  MRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKT

Query:  NEAEAVETGELV
        NEAEAVETG +V
Subjt:  NEAEAVETGELV

KJB12889.1 hypothetical protein B456_002G042900 [Gossypium raimondii]6.8e-5699.09Show/hide
Query:  MRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKT
        MRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKT
Subjt:  MRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKT

Query:  NEAEAVETGE
        NEAEAVETG+
Subjt:  NEAEAVETGE

KJB82042.1 hypothetical protein B456_013G173200 [Gossypium raimondii]4.0e-5698.2Show/hide
Query:  MRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKT
        MRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKT
Subjt:  MRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKT

Query:  NEAEAVETGEL
        NEAEAVETG++
Subjt:  NEAEAVETGEL

XP_040989168.1 ubiquitin-conjugating enzyme E2 36 isoform X1 [Juglans microcarpa x Juglans regia]1.8e-5698.21Show/hide
Query:  MRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKT
        MRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKT
Subjt:  MRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKT

Query:  NEAEAVETGELV
        NEAEAVETG +V
Subjt:  NEAEAVETGELV

TrEMBL top hitse value%identityAlignment
A0A061F987 Ubiquitin-conjugating enzyme 36 isoform 24.3e-56100Show/hide
Query:  MRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKT
        MRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKT
Subjt:  MRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKT

Query:  NEAEAVETG
        NEAEAVETG
Subjt:  NEAEAVETG

A0A0D2Q0K6 UBC core domain-containing protein3.3e-5699.09Show/hide
Query:  MRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKT
        MRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKT
Subjt:  MRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKT

Query:  NEAEAVETGE
        NEAEAVETG+
Subjt:  NEAEAVETGE

A0A0D2SFU0 UBC core domain-containing protein1.9e-5698.2Show/hide
Query:  MRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKT
        MRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKT
Subjt:  MRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKT

Query:  NEAEAVETGEL
        NEAEAVETG++
Subjt:  NEAEAVETGEL

A0A2G9HGK5 Ubiquitin-protein ligase4.3e-56100Show/hide
Query:  MRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKT
        MRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKT
Subjt:  MRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKT

Query:  NEAEAVETG
        NEAEAVETG
Subjt:  NEAEAVETG

A0A2N9I129 UBC core domain-containing protein8.6e-5798.21Show/hide
Query:  MRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKT
        MRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKT
Subjt:  MRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKT

Query:  NEAEAVETGELV
        NEAEAVETG +V
Subjt:  NEAEAVETGELV

SwissProt top hitse value%identityAlignment
P61088 Ubiquitin-conjugating enzyme E2 N9.8e-5084.11Show/hide
Query:  RYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKTN
        RYF+V+I GP  SP+EGG FKLELFLPEEYPMAAPKVRF+TKIYHPN+DKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPL+ ++A+ WKTN
Subjt:  RYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKTN

Query:  EAEAVET
        EA+A+ET
Subjt:  EAEAVET

P61089 Ubiquitin-conjugating enzyme E2 N9.8e-5084.11Show/hide
Query:  RYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKTN
        RYF+V+I GP  SP+EGG FKLELFLPEEYPMAAPKVRF+TKIYHPN+DKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPL+ ++A+ WKTN
Subjt:  RYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKTN

Query:  EAEAVET
        EA+A+ET
Subjt:  EAEAVET

Q0P5K3 Ubiquitin-conjugating enzyme E2 N9.8e-5084.11Show/hide
Query:  RYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKTN
        RYF+V+I GP  SP+EGG FKLELFLPEEYPMAAPKVRF+TKIYHPN+DKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPL+ ++A+ WKTN
Subjt:  RYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKTN

Query:  EAEAVET
        EA+A+ET
Subjt:  EAEAVET

Q94A97 Ubiquitin-conjugating enzyme E2 352.9e-5796.36Show/hide
Query:  MRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKT
        MRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWK+
Subjt:  MRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKT

Query:  NEAEAVETGE
        NEAEAV+T +
Subjt:  NEAEAVETGE

Q9FZ48 Ubiquitin-conjugating enzyme E2 361.3e-5797.27Show/hide
Query:  MRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKT
        MRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWK+
Subjt:  MRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKT

Query:  NEAEAVETGE
        NEAEAVET +
Subjt:  NEAEAVETGE

Arabidopsis top hitse value%identityAlignment
AT1G16890.1 ubiquitin-conjugating enzyme 369.1e-5997.27Show/hide
Query:  MRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKT
        MRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWK+
Subjt:  MRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKT

Query:  NEAEAVETGE
        NEAEAVET +
Subjt:  NEAEAVETGE

AT1G16890.2 ubiquitin-conjugating enzyme 369.1e-5997.27Show/hide
Query:  MRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKT
        MRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWK+
Subjt:  MRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKT

Query:  NEAEAVETGE
        NEAEAVET +
Subjt:  NEAEAVETGE

AT1G16890.3 ubiquitin-conjugating enzyme 369.1e-5997.27Show/hide
Query:  MRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKT
        MRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWK+
Subjt:  MRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKT

Query:  NEAEAVETGE
        NEAEAVET +
Subjt:  NEAEAVETGE

AT1G78870.1 ubiquitin-conjugating enzyme 355.0e-5795.5Show/hide
Query:  MRYFNVMILGPTQSPYEG-GVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWK
        MRYFNVMILGPTQSPYEG GVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWK
Subjt:  MRYFNVMILGPTQSPYEG-GVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWK

Query:  TNEAEAVETGE
        +NEAEAV+T +
Subjt:  TNEAEAVETGE

AT1G78870.2 ubiquitin-conjugating enzyme 352.0e-5896.36Show/hide
Query:  MRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKT
        MRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWK+
Subjt:  MRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKT

Query:  NEAEAVETGE
        NEAEAV+T +
Subjt:  NEAEAVETGE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCGATATTTTAACGTCATGATTCTTGGCCCGACTCAGTCACCCTATGAAGGAGGAGTTTTCAAGTTGGAACTATTTTTACCTGAAGAATATCCTATGGCTGCTCCCAA
GGTTCGATTTCTCACAAAGATTTATCATCCGAATATTGACAAGCTTGGGAGGATATGCCTTGATATTCTGAAAGACAAATGGAGTCCAGCTCTACAGATACGAACTGTAC
TTTTGAGTATTCAAGCACTTCTAAGTGCTCCAAACCCAGATGATCCACTATCCGAGAACATTGCCAAACATTGGAAAACAAATGAGGCAGAAGCTGTTGAAACAGGTGAG
TTGGTTTAA
mRNA sequenceShow/hide mRNA sequence
ATGCGATATTTTAACGTCATGATTCTTGGCCCGACTCAGTCACCCTATGAAGGAGGAGTTTTCAAGTTGGAACTATTTTTACCTGAAGAATATCCTATGGCTGCTCCCAA
GGTTCGATTTCTCACAAAGATTTATCATCCGAATATTGACAAGCTTGGGAGGATATGCCTTGATATTCTGAAAGACAAATGGAGTCCAGCTCTACAGATACGAACTGTAC
TTTTGAGTATTCAAGCACTTCTAAGTGCTCCAAACCCAGATGATCCACTATCCGAGAACATTGCCAAACATTGGAAAACAAATGAGGCAGAAGCTGTTGAAACAGGTGAG
TTGGTTTAA
Protein sequenceShow/hide protein sequence
MRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKTNEAEAVETGE
LV