CuGenDBv2

Gene ID	HG10002666
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	Rpr2 domain-containing protein
Genome location	Chr11:9572565..9575595
RNA-Seq Expression	HG10002666
Synteny	HG10002666
Gene Ontology terms	NA
InterPro domains	NA

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAA0044832.1 Rpr2 domain-containing protein [Cucumis melo var. makuwa]

1.6e-111

59.95

Show/hide

Query:  MARKKGNTKKGASNPTSGPQDSITLRQEITGKIKPKVSNNVKVYLNHLQNLATWATAQPSIPSLAAFYGQRLAAAAESLAVSPDASLFLCQRSSKKRAFG
        MARKKGNTK+G+SNPTSGPQ+SITLRQE TGKIKPKVSNN KVYLNHL+NLATWA+ QPS+PSLAAF+GQRLAAAAESLAV+PD SLFLC R        
Subjt:  MARKKGNTKKGASNPTSGPQDSITLRQEITGKIKPKVSNNVKVYLNHLQNLATWATAQPSIPSLAAFYGQRLAAAAESLAVSPDASLFLCQRSSKKRAFG

Query:  GSEENNMPQKDLACLNGVHIPSAISQEKARKLSAINFVIWSMCETILQPGSNCSIRIEKNNVKRHRRRNKCSDLTQNVVVYYCHYCSCRNIKRGTPKGHM
                                                  CET+LQPGSNC IRIEKNN K+  R  K S++TQNVV YYCHYCSCRNIKRGTPKGHM
Subjt:  GSEENNMPQKDLACLNGVHIPSAISQEKARKLSAINFVIWSMCETILQPGSNCSIRIEKNNVKRHRRRNKCSDLTQNVVVYYCHYCSCRNIKRGTPKGHM

Query:  KGLYDTKFVSKVKSVDLKDGKECENEILTMDAPKILPSTTRDSLTIDTPAIP----------------PPPE----------------------------
        K LY T+ VSKVKSV +KDGKECEN+ILTMDAP   P TT D LTIDTPAIP                PP E                            
Subjt:  KGLYDTKFVSKVKSVDLKDGKECENEILTMDAPKILPSTTRDSLTIDTPAIP----------------PPPE----------------------------

Query:  ------DTPTIDAPATPPTMTGMTLLNSKRRKRKKPLSKNQTEPESCSASTADGDKTEGTSKRRRNRKSWTSLKDIAKRNEESGKQNVAVLAIPFSL
              D PT+DAPATP T+T MTLL+SKRRKRKKP SKN+TEPESCSA T+ G+K+E TSKR+RNRKSWTSLK+IA+R EE GKQNVA LAIPFSL
Subjt:  ------DTPTIDAPATPPTMTGMTLLNSKRRKRKKPLSKNQTEPESCSASTADGDKTEGTSKRRRNRKSWTSLKDIAKRNEESGKQNVAVLAIPFSL

KAG6577189.1 hypothetical protein SDJN03_24763, partial [Cucurbita argyrosperma subsp. sororia]

1.3e-102

55.12

Show/hide

Query:  MARKKGNTKKGASNPTSGPQDSITLRQEITGKIKPKVSNNVKVYLNHLQNLATWATAQPSIPSLAAFYGQRLAAAAESLAVSPDASLFLCQRSSKKRAFG
        MA++KGNTKKGASNPTSGPQDSIT+RQEITGK KPKVSNNVK YLNHL+NLATWA+ + SIPSLAAF+GQRLA AAESLAV+PDASLF CQR        
Subjt:  MARKKGNTKKGASNPTSGPQDSITLRQEITGKIKPKVSNNVKVYLNHLQNLATWATAQPSIPSLAAFYGQRLAAAAESLAVSPDASLFLCQRSSKKRAFG

Query:  GSEENNMPQKDLACLNGVHIPSAISQEKARKLSAINFVIWSMCETILQPGSNCSIRIEKNNVKRHRRRNKCSDLTQNVVVYYCHYCSCRNIKRGTPKGHM
                                                  CETILQPGSNCSIRIEKNN KR RR+ KC + TQN V YYCH+CSCRNIKRGTPKGHM
Subjt:  GSEENNMPQKDLACLNGVHIPSAISQEKARKLSAINFVIWSMCETILQPGSNCSIRIEKNNVKRHRRRNKCSDLTQNVVVYYCHYCSCRNIKRGTPKGHM

Query:  KGLYDTKFVSKVKSVDLKDGKECE-------NEILTMDAPKI-----LPSTTRDSLTIDTPAIPPPPED-------------------------------
        K LYD  F  +VK VD+KDGKECE        EILT+DAPKI     +P  T D   +D PAI  P  +                               
Subjt:  KGLYDTKFVSKVKSVDLKDGKECE-------NEILTMDAPKI-----LPSTTRDSLTIDTPAIPPPPED-------------------------------

Query:  -------------------TPTIDAPATPPTMTGMTLLNSKRRKRKKPLSKNQTEPESCSASTADGDKTEGTSKRRRNRKSWTSLKDIAKRNEESGKQ-N
                            PT+D PATP T TG+TLL+SK+RKR KP SKNQTEP SCSA TADGD++EGTSKR R RKSWTSLK++A+ NE+SGKQ N
Subjt:  -------------------TPTIDAPATPPTMTGMTLLNSKRRKRKKPLSKNQTEPESCSASTADGDKTEGTSKRRRNRKSWTSLKDIAKRNEESGKQ-N

Query:  VAVLAIPFSL
        +A LAIPFSL
Subjt:  VAVLAIPFSL

XP_004146565.1 uncharacterized protein LOC101220608 [Cucumis sativus]

1.9e-109

59.19

Show/hide

Query:  MARKKGNTKKGASNPTSGPQDSITLRQEITGKIKPKVSNNVKVYLNHLQNLATWATAQPSIPSLAAFYGQRLAAAAESLAVSPDASLFLCQRSSKKRAFG
        MARKK NT +G+SNP  GPQ+SITLRQE TGKIKPKVSNN KVYLNHL+NLATWA+ QPS+PSLAAF+GQRLAAAAESLAVSPD SLFLC R        
Subjt:  MARKKGNTKKGASNPTSGPQDSITLRQEITGKIKPKVSNNVKVYLNHLQNLATWATAQPSIPSLAAFYGQRLAAAAESLAVSPDASLFLCQRSSKKRAFG

Query:  GSEENNMPQKDLACLNGVHIPSAISQEKARKLSAINFVIWSMCETILQPGSNCSIRIEKNNVKRHRRRNKCSDLTQNVVVYYCHYCSCRNIKRGTPKGHM
                                                  CETILQPGSNC+IRIEKN  K+ RR  K S+LTQNVV YYCHYCSCRNIKRGTPKGHM
Subjt:  GSEENNMPQKDLACLNGVHIPSAISQEKARKLSAINFVIWSMCETILQPGSNCSIRIEKNNVKRHRRRNKCSDLTQNVVVYYCHYCSCRNIKRGTPKGHM

Query:  KGLYDTKFVSKVKSVDLKDGKECENEILTMDAPKILPSTTRDSLTIDTPAIP------------------------------------------------
        K LY T+ VSKVKSV +KDGKECEN+I TMD PKI P TT D LTIDTPAIP                                                
Subjt:  KGLYDTKFVSKVKSVDLKDGKECENEILTMDAPKILPSTTRDSLTIDTPAIP------------------------------------------------

Query:  --PPPEDTPTIDAPATPPTMTGMTLLNSKRRKRKKPLSKNQTEPESCSASTADGDKTEGTSKRRRNRKSWTSLKDIAKRNEESGKQNVAVLAIPFSL
              D PT+DAPATP T+TGMTLL+SKRRKRKKP SKNQTEPESCS  T+ G+ +EGTSKR+RNRKSWTSLK+IA+R EE GKQNVA LAIPFSL
Subjt:  --PPPEDTPTIDAPATPPTMTGMTLLNSKRRKRKKPLSKNQTEPESCSASTADGDKTEGTSKRRRNRKSWTSLKDIAKRNEESGKQNVAVLAIPFSL

XP_008452026.1 PREDICTED: uncharacterized protein LOC103493157 [Cucumis melo]

7.1e-112

59.95

Show/hide

Query:  MARKKGNTKKGASNPTSGPQDSITLRQEITGKIKPKVSNNVKVYLNHLQNLATWATAQPSIPSLAAFYGQRLAAAAESLAVSPDASLFLCQRSSKKRAFG
        MARKKGNTK+G+SNPTSGPQ+SITLRQE TGKIKPKVSNN KVYLNHL+NLATWA+ QPS+PSLAAF+GQRLAAAAESLAV+PD SLFLC R        
Subjt:  MARKKGNTKKGASNPTSGPQDSITLRQEITGKIKPKVSNNVKVYLNHLQNLATWATAQPSIPSLAAFYGQRLAAAAESLAVSPDASLFLCQRSSKKRAFG

Query:  GSEENNMPQKDLACLNGVHIPSAISQEKARKLSAINFVIWSMCETILQPGSNCSIRIEKNNVKRHRRRNKCSDLTQNVVVYYCHYCSCRNIKRGTPKGHM
                                                  CET+LQPGSNC IRIEKNN K+ RR  K S++TQNVV YYCHYCSCRNIKRGTPKGHM
Subjt:  GSEENNMPQKDLACLNGVHIPSAISQEKARKLSAINFVIWSMCETILQPGSNCSIRIEKNNVKRHRRRNKCSDLTQNVVVYYCHYCSCRNIKRGTPKGHM

Query:  KGLYDTKFVSKVKSVDLKDGKECENEILTMDAPKILPSTTRDSLTIDTPAIP----------------PPPE----------------------------
        K LY T+ VSKVKSV +KDGKECEN+ILT+DAP   P TT D LTIDTPAIP                PP E                            
Subjt:  KGLYDTKFVSKVKSVDLKDGKECENEILTMDAPKILPSTTRDSLTIDTPAIP----------------PPPE----------------------------

Query:  ------DTPTIDAPATPPTMTGMTLLNSKRRKRKKPLSKNQTEPESCSASTADGDKTEGTSKRRRNRKSWTSLKDIAKRNEESGKQNVAVLAIPFSL
              D PT+DAPATP T+T MTLL+SKRRKRKKP SKN+TEPESCSA T+ G+K+E TSKR+RNRKSWTSLK+IA+R EE GKQNVA LAIPFSL
Subjt:  ------DTPTIDAPATPPTMTGMTLLNSKRRKRKKPLSKNQTEPESCSASTADGDKTEGTSKRRRNRKSWTSLKDIAKRNEESGKQNVAVLAIPFSL

XP_038906436.1 uncharacterized protein LOC120092350 isoform X1 [Benincasa hispida]

1.4e-112

59.32

Show/hide

Query:  MARKKGNTKKGASNPTSGPQDSITLRQEITGKIKPKVSNNVKVYLNHLQNLATWATAQPSIPSLAAFYGQRLAAAAESLAVSPDASLFLCQRSSKKRAFG
        MA+KKGN KKG+SNPTSGPQDSITLRQEITGKIKPKVSNNVKVYLNHL+NLATWA  QPSIPSLA F+GQRLAAAAESLAV+PDASLFLCQR        
Subjt:  MARKKGNTKKGASNPTSGPQDSITLRQEITGKIKPKVSNNVKVYLNHLQNLATWATAQPSIPSLAAFYGQRLAAAAESLAVSPDASLFLCQRSSKKRAFG

Query:  GSEENNMPQKDLACLNGVHIPSAISQEKARKLSAINFVIWSMCETILQPGSNCSIRIEKNNVKRHRRRNKCSDLTQNVVVYYCHYCSCRNIKRGTPKGHM
                                                  CETILQPGSNCSIRIEKNN KR R+ NKCS+LTQNVV YYCHYCSCRNIKRGTPKGHM
Subjt:  GSEENNMPQKDLACLNGVHIPSAISQEKARKLSAINFVIWSMCETILQPGSNCSIRIEKNNVKRHRRRNKCSDLTQNVVVYYCHYCSCRNIKRGTPKGHM

Query:  KGLYDTKFVSKVKSVDLKDGKECENEI--------LTMDAPKILPSTTRDSLTIDTPAIPPPPE------------------------------------
        K LY T+FVSK+KSV ++DGKECEN+I        LT+D P I PSTT +   IDT AIPP  +                                    
Subjt:  KGLYDTKFVSKVKSVDLKDGKECENEI--------LTMDAPKILPSTTRDSLTIDTPAIPPPPE------------------------------------

Query:  ----------------------DTPTIDAPATPPTMTGMTLLNSKRRKRKKPLSKNQTEPESCSASTADGDKTEGTSKRRRNRKSWTSLKDIAKRNEESG
                              D PT+DAPATPPTMTG+TLL+SKRRKRKKP SKNQTEPES SA T  GDKT G SKR+RNRKSWTSLK+IA+R+EE G
Subjt:  ----------------------DTPTIDAPATPPTMTGMTLLNSKRRKRKKPLSKNQTEPESCSASTADGDKTEGTSKRRRNRKSWTSLKDIAKRNEESG

Query:  KQNVAVLAIPFSL
        KQNVAVLAIPFSL
Subjt:  KQNVAVLAIPFSL

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KUP1 Uncharacterized protein

9.4e-110

59.19

Show/hide

Query:  MARKKGNTKKGASNPTSGPQDSITLRQEITGKIKPKVSNNVKVYLNHLQNLATWATAQPSIPSLAAFYGQRLAAAAESLAVSPDASLFLCQRSSKKRAFG
        MARKK NT +G+SNP  GPQ+SITLRQE TGKIKPKVSNN KVYLNHL+NLATWA+ QPS+PSLAAF+GQRLAAAAESLAVSPD SLFLC R        
Subjt:  MARKKGNTKKGASNPTSGPQDSITLRQEITGKIKPKVSNNVKVYLNHLQNLATWATAQPSIPSLAAFYGQRLAAAAESLAVSPDASLFLCQRSSKKRAFG

Query:  GSEENNMPQKDLACLNGVHIPSAISQEKARKLSAINFVIWSMCETILQPGSNCSIRIEKNNVKRHRRRNKCSDLTQNVVVYYCHYCSCRNIKRGTPKGHM
                                                  CETILQPGSNC+IRIEKN  K+ RR  K S+LTQNVV YYCHYCSCRNIKRGTPKGHM
Subjt:  GSEENNMPQKDLACLNGVHIPSAISQEKARKLSAINFVIWSMCETILQPGSNCSIRIEKNNVKRHRRRNKCSDLTQNVVVYYCHYCSCRNIKRGTPKGHM

Query:  KGLYDTKFVSKVKSVDLKDGKECENEILTMDAPKILPSTTRDSLTIDTPAIP------------------------------------------------
        K LY T+ VSKVKSV +KDGKECEN+I TMD PKI P TT D LTIDTPAIP                                                
Subjt:  KGLYDTKFVSKVKSVDLKDGKECENEILTMDAPKILPSTTRDSLTIDTPAIP------------------------------------------------

Query:  --PPPEDTPTIDAPATPPTMTGMTLLNSKRRKRKKPLSKNQTEPESCSASTADGDKTEGTSKRRRNRKSWTSLKDIAKRNEESGKQNVAVLAIPFSL
              D PT+DAPATP T+TGMTLL+SKRRKRKKP SKNQTEPESCS  T+ G+ +EGTSKR+RNRKSWTSLK+IA+R EE GKQNVA LAIPFSL
Subjt:  --PPPEDTPTIDAPATPPTMTGMTLLNSKRRKRKKPLSKNQTEPESCSASTADGDKTEGTSKRRRNRKSWTSLKDIAKRNEESGKQNVAVLAIPFSL

A0A1S3BU13 uncharacterized protein LOC103493157

3.4e-112

59.95

Show/hide

Query:  MARKKGNTKKGASNPTSGPQDSITLRQEITGKIKPKVSNNVKVYLNHLQNLATWATAQPSIPSLAAFYGQRLAAAAESLAVSPDASLFLCQRSSKKRAFG
        MARKKGNTK+G+SNPTSGPQ+SITLRQE TGKIKPKVSNN KVYLNHL+NLATWA+ QPS+PSLAAF+GQRLAAAAESLAV+PD SLFLC R        
Subjt:  MARKKGNTKKGASNPTSGPQDSITLRQEITGKIKPKVSNNVKVYLNHLQNLATWATAQPSIPSLAAFYGQRLAAAAESLAVSPDASLFLCQRSSKKRAFG

Query:  GSEENNMPQKDLACLNGVHIPSAISQEKARKLSAINFVIWSMCETILQPGSNCSIRIEKNNVKRHRRRNKCSDLTQNVVVYYCHYCSCRNIKRGTPKGHM
                                                  CET+LQPGSNC IRIEKNN K+ RR  K S++TQNVV YYCHYCSCRNIKRGTPKGHM
Subjt:  GSEENNMPQKDLACLNGVHIPSAISQEKARKLSAINFVIWSMCETILQPGSNCSIRIEKNNVKRHRRRNKCSDLTQNVVVYYCHYCSCRNIKRGTPKGHM

Query:  KGLYDTKFVSKVKSVDLKDGKECENEILTMDAPKILPSTTRDSLTIDTPAIP----------------PPPE----------------------------
        K LY T+ VSKVKSV +KDGKECEN+ILT+DAP   P TT D LTIDTPAIP                PP E                            
Subjt:  KGLYDTKFVSKVKSVDLKDGKECENEILTMDAPKILPSTTRDSLTIDTPAIP----------------PPPE----------------------------

Query:  ------DTPTIDAPATPPTMTGMTLLNSKRRKRKKPLSKNQTEPESCSASTADGDKTEGTSKRRRNRKSWTSLKDIAKRNEESGKQNVAVLAIPFSL
              D PT+DAPATP T+T MTLL+SKRRKRKKP SKN+TEPESCSA T+ G+K+E TSKR+RNRKSWTSLK+IA+R EE GKQNVA LAIPFSL
Subjt:  ------DTPTIDAPATPPTMTGMTLLNSKRRKRKKPLSKNQTEPESCSASTADGDKTEGTSKRRRNRKSWTSLKDIAKRNEESGKQNVAVLAIPFSL

A0A5A7TNC0 Rpr2 domain-containing protein

7.7e-112

59.95

Show/hide

Query:  MARKKGNTKKGASNPTSGPQDSITLRQEITGKIKPKVSNNVKVYLNHLQNLATWATAQPSIPSLAAFYGQRLAAAAESLAVSPDASLFLCQRSSKKRAFG
        MARKKGNTK+G+SNPTSGPQ+SITLRQE TGKIKPKVSNN KVYLNHL+NLATWA+ QPS+PSLAAF+GQRLAAAAESLAV+PD SLFLC R        
Subjt:  MARKKGNTKKGASNPTSGPQDSITLRQEITGKIKPKVSNNVKVYLNHLQNLATWATAQPSIPSLAAFYGQRLAAAAESLAVSPDASLFLCQRSSKKRAFG

Query:  GSEENNMPQKDLACLNGVHIPSAISQEKARKLSAINFVIWSMCETILQPGSNCSIRIEKNNVKRHRRRNKCSDLTQNVVVYYCHYCSCRNIKRGTPKGHM
                                                  CET+LQPGSNC IRIEKNN K+  R  K S++TQNVV YYCHYCSCRNIKRGTPKGHM
Subjt:  GSEENNMPQKDLACLNGVHIPSAISQEKARKLSAINFVIWSMCETILQPGSNCSIRIEKNNVKRHRRRNKCSDLTQNVVVYYCHYCSCRNIKRGTPKGHM

Query:  KGLYDTKFVSKVKSVDLKDGKECENEILTMDAPKILPSTTRDSLTIDTPAIP----------------PPPE----------------------------
        K LY T+ VSKVKSV +KDGKECEN+ILTMDAP   P TT D LTIDTPAIP                PP E                            
Subjt:  KGLYDTKFVSKVKSVDLKDGKECENEILTMDAPKILPSTTRDSLTIDTPAIP----------------PPPE----------------------------

Query:  ------DTPTIDAPATPPTMTGMTLLNSKRRKRKKPLSKNQTEPESCSASTADGDKTEGTSKRRRNRKSWTSLKDIAKRNEESGKQNVAVLAIPFSL
              D PT+DAPATP T+T MTLL+SKRRKRKKP SKN+TEPESCSA T+ G+K+E TSKR+RNRKSWTSLK+IA+R EE GKQNVA LAIPFSL
Subjt:  ------DTPTIDAPATPPTMTGMTLLNSKRRKRKKPLSKNQTEPESCSASTADGDKTEGTSKRRRNRKSWTSLKDIAKRNEESGKQNVAVLAIPFSL

A0A5D3CYJ3 Rpr2 domain-containing protein

3.4e-112

59.95

Show/hide

Query:  MARKKGNTKKGASNPTSGPQDSITLRQEITGKIKPKVSNNVKVYLNHLQNLATWATAQPSIPSLAAFYGQRLAAAAESLAVSPDASLFLCQRSSKKRAFG
        MARKKGNTK+G+SNPTSGPQ+SITLRQE TGKIKPKVSNN KVYLNHL+NLATWA+ QPS+PSLAAF+GQRLAAAAESLAV+PD SLFLC R        
Subjt:  MARKKGNTKKGASNPTSGPQDSITLRQEITGKIKPKVSNNVKVYLNHLQNLATWATAQPSIPSLAAFYGQRLAAAAESLAVSPDASLFLCQRSSKKRAFG

Query:  GSEENNMPQKDLACLNGVHIPSAISQEKARKLSAINFVIWSMCETILQPGSNCSIRIEKNNVKRHRRRNKCSDLTQNVVVYYCHYCSCRNIKRGTPKGHM
                                                  CET+LQPGSNC IRIEKNN K+ RR  K S++TQNVV YYCHYCSCRNIKRGTPKGHM
Subjt:  GSEENNMPQKDLACLNGVHIPSAISQEKARKLSAINFVIWSMCETILQPGSNCSIRIEKNNVKRHRRRNKCSDLTQNVVVYYCHYCSCRNIKRGTPKGHM

Query:  KGLYDTKFVSKVKSVDLKDGKECENEILTMDAPKILPSTTRDSLTIDTPAIP----------------PPPE----------------------------
        K LY T+ VSKVKSV +KDGKECEN+ILT+DAP   P TT D LTIDTPAIP                PP E                            
Subjt:  KGLYDTKFVSKVKSVDLKDGKECENEILTMDAPKILPSTTRDSLTIDTPAIP----------------PPPE----------------------------

Query:  ------DTPTIDAPATPPTMTGMTLLNSKRRKRKKPLSKNQTEPESCSASTADGDKTEGTSKRRRNRKSWTSLKDIAKRNEESGKQNVAVLAIPFSL
              D PT+DAPATP T+T MTLL+SKRRKRKKP SKN+TEPESCSA T+ G+K+E TSKR+RNRKSWTSLK+IA+R EE GKQNVA LAIPFSL
Subjt:  ------DTPTIDAPATPPTMTGMTLLNSKRRKRKKPLSKNQTEPESCSASTADGDKTEGTSKRRRNRKSWTSLKDIAKRNEESGKQNVAVLAIPFSL

A0A6J1J5I6 uncharacterized protein LOC111482797

8.5e-103

56.02

Show/hide

Query:  MARKKGNTKKGASNPTSGPQDSITLRQEITGKIKPKVSNNVKVYLNHLQNLATWATAQPSIPSLAAFYGQRLAAAAESLAVSPDASLFLCQRSSKKRAFG
        MA++KGNTKKGASNPTSGPQDSIT+RQEITGK KPKVSNNVK YLNHL+NLATWA+ + SIPSLAAF+GQRLA AAESLAV+PDASLF CQR        
Subjt:  MARKKGNTKKGASNPTSGPQDSITLRQEITGKIKPKVSNNVKVYLNHLQNLATWATAQPSIPSLAAFYGQRLAAAAESLAVSPDASLFLCQRSSKKRAFG

Query:  GSEENNMPQKDLACLNGVHIPSAISQEKARKLSAINFVIWSMCETILQPGSNCSIRIEKNNVKRHRRRNKCSDLTQNVVVYYCHYCSCRNIKRGTPKGHM
                                                  CETILQPGSNCSIRIEKNN KR RR+ KCS+  QN V YYCH+CSCRNIKRGTPKGHM
Subjt:  GSEENNMPQKDLACLNGVHIPSAISQEKARKLSAINFVIWSMCETILQPGSNCSIRIEKNNVKRHRRRNKCSDLTQNVVVYYCHYCSCRNIKRGTPKGHM

Query:  KGLYDTKFVSKVKSVDLKDGKECE-------NEILTMDAPKI-----LPST--------------TRDSLTIDTPAIPPPPEDT----------------
        K LYD  F  +VK VD+KDGKECE        EILT+DAPKI     +P T              T+  L I++PA P     T                
Subjt:  KGLYDTKFVSKVKSVDLKDGKECE-------NEILTMDAPKI-----LPST--------------TRDSLTIDTPAIPPPPEDT----------------

Query:  -----------------PTIDAPATPPTMTGMTLLNSKRRKRKKPLSKNQTEPESCSASTADGDKTEGTSKRRRNRKSWTSLKDIAKRNEESGKQ-NVAV
                         PT+DAPATP T TG+TLL+SK+RKR KP SKNQTEP SCSA TADGD++EGTSKR R RKSWTSLK++A+ NE+SGKQ N+A 
Subjt:  -----------------PTIDAPATPPTMTGMTLLNSKRRKRKKPLSKNQTEPESCSASTADGDKTEGTSKRRRNRKSWTSLKDIAKRNEESGKQ-NVAV

Query:  LAIPFSL
        LAIPFSL
Subjt:  LAIPFSL

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT5G41270.1 CONTAINS InterPro DOMAIN/s: RNAse P, Rpr2/Rpp21 subunit (InterPro:IPR007175); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).

1.6e-24

32.25

Show/hide

Query:  HLQNLATW-ATAQPSIPSLAAFYGQRLAAAAESLAVSPDASLFLCQRSSKKRAFGGSEENNMPQKDLACLNGVHIPSAISQEKARKLSAINFVIWSMCET
        HL+NLA W +T    IPSLA+  G+RLAA  ES  ++ D  L  CQR                                                  CET
Subjt:  HLQNLATW-ATAQPSIPSLAAFYGQRLAAAAESLAVSPDASLFLCQRSSKKRAFGGSEENNMPQKDLACLNGVHIPSAISQEKARKLSAINFVIWSMCET

Query:  ILQPGSNCSIRIEKNNVKRHRRRNKCSD-----LTQNVVVYYCHYCSCRNIKRGTPKGHMKGLYDTKFVSKVKSVDLKDGKECENEILTMDAPKILPSTT
        IL+PG NC++RIEK +    ++RN+C         QN VVY+C++CS RN+KRGT KG MK LY  K     +S   K  KE       M  P+ + S  
Subjt:  ILQPGSNCSIRIEKNNVKRHRRRNKCSD-----LTQNVVVYYCHYCSCRNIKRGTPKGHMKGLYDTKFVSKVKSVDLKDGKECENEILTMDAPKILPSTT

Query:  RDSLTIDTPAIPPPPEDTPTIDAPATPPTMTGMTLLNSKRRKRKKPLSKNQTEPESCSASTADGDKTEGTSKRRRNRKSWTSLKDIAKRNEESGKQNVAV
          S         P       ++  +   T   M L   + R+ +KP SK  +EP+S        +KT G S +R+ +  WTS+K+IA+ N+ S   N   
Subjt:  RDSLTIDTPAIPPPPEDTPTIDAPATPPTMTGMTLLNSKRRKRKKPLSKNQTEPESCSASTADGDKTEGTSKRRRNRKSWTSLKDIAKRNEESGKQNVAV

Query:  LAIPFSL
          IPF L
Subjt:  LAIPFSL

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGCAAGGAAGAAGGGAAATACGAAGAAAGGAGCATCTAATCCCACATCCGGTCCTCAAGATTCGATCACTCTTAGACAGGAAATTACTGGGAAAATCAAACCCAAAGT
CTCTAACAATGTCAAAGTTTATTTGAACCATTTACAAAACTTAGCGACTTGGGCTACTGCTCAACCCTCTATACCTTCATTGGCTGCTTTCTATGGGCAGCGCCTCGCAG
CTGCAGCGGAGTCTTTGGCGGTCTCTCCCGACGCTTCTCTATTTCTCTGCCAGAGGAGCTCTAAAAAGAGAGCTTTTGGAGGTAGTGAGGAAAATAACATGCCTCAGAAA
GATCTAGCCTGCTTAAATGGCGTGCATATCCCTTCTGCAATCTCTCAAGAGAAAGCCAGGAAGCTAAGTGCAATCAATTTTGTTATTTGGAGCATGTGTGAAACAATTCT
TCAACCTGGTTCTAACTGCTCAATACGAATAGAGAAGAATAATGTCAAGAGACATCGGAGACGCAACAAATGTAGTGATTTGACACAGAACGTTGTGGTGTATTATTGCC
ACTACTGCTCATGTAGGAACATAAAGAGAGGGACCCCTAAAGGTCATATGAAAGGGCTTTATGACACGAAGTTTGTAAGCAAAGTGAAATCTGTGGATCTCAAGGATGGT
AAAGAATGTGAAAACGAGATTCTTACCATGGATGCTCCTAAAATTCTTCCTTCTACCACCAGAGACAGTCTAACTATTGATACTCCTGCAATTCCTCCTCCACCTGAGGA
CACTCCCACTATAGATGCTCCTGCAACTCCTCCCACCATGACCGGAATGACTTTGTTGAATTCAAAGAGGAGAAAGAGGAAGAAACCGTTATCGAAGAATCAAACTGAAC
CTGAAAGTTGTTCGGCTTCAACAGCAGATGGGGACAAAACTGAAGGCACATCCAAGAGGAGGCGTAATAGAAAATCATGGACAAGTTTGAAGGACATTGCTAAGAGGAAT
GAAGAGAGTGGTAAACAAAACGTGGCTGTATTGGCAATTCCATTCTCCTTATGA

mRNA sequence

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Protein sequence

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MARKKGNTKKGASNPTSGPQDSITLRQEITGKIKPKVSNNVKVYLNHLQNLATWATAQPSIPSLAAFYGQRLAAAAESLAVSPDASLFLCQRSSKKRAFGGSEENNMPQK
DLACLNGVHIPSAISQEKARKLSAINFVIWSMCETILQPGSNCSIRIEKNNVKRHRRRNKCSDLTQNVVVYYCHYCSCRNIKRGTPKGHMKGLYDTKFVSKVKSVDLKDG
KECENEILTMDAPKILPSTTRDSLTIDTPAIPPPPEDTPTIDAPATPPTMTGMTLLNSKRRKRKKPLSKNQTEPESCSASTADGDKTEGTSKRRRNRKSWTSLKDIAKRN
EESGKQNVAVLAIPFSL

HG10002666 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome