CuGenDBv2

Gene ID	HG10002673
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	stress-response A/B barrel domain-containing protein UP3
Genome location	Chr11:9641648..9644063
RNA-Seq Expression	HG10002673
Synteny	HG10002673
Gene Ontology terms	NA
InterPro domains	IPR011008 - Dimeric alpha-beta barrel IPR013097 - Stress responsive alpha-beta barrel IPR044662 - Stress-response A/B barrel domain-containing protein HS1/DABB1-like

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_011653186.1 stress-response A/B barrel domain-containing protein UP3 [Cucumis sativus]

2.4e-98

77.17

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Query:  MGRRNESMSRISASGEHSPTIILGKKRKVFEHISLLKAKENISEEEENNMLDYLYTTQYQMRGIVAVSLGEFL----------AFLLFKTMERSE-LRVK
        +GRR ESMSRISASGEH+PTII+GKKRKVFEHISLLKAKENISEEEEN+MLDYLYTTQYQMRGIVAVSLG              ++ F++ E  E   V 
Subjt:  MGRRNESMSRISASGEHSPTIILGKKRKVFEHISLLKAKENISEEEENNMLDYLYTTQYQMRGIVAVSLGEFL----------AFLLFKTMERSE-LRVK

Query:  FTFLLILQDVLVIIIMKAIPMGLIHVDYESEVEDDMLPIFRKGEEFNYGVEFVLLIKFLQDSFGKPLEDALNSLERLTIDNPSLIVQYTQGLNFNPSCKE
          +L +L + ++         GL+HVDY+SEVEDDMLPIFRKGEEFNYGVEFVLLIKF QDSFGKPLEDALNSLERLTIDNPSLIVQ+TQGLNFNPSCKE
Subjt:  FTFLLILQDVLVIIIMKAIPMGLIHVDYESEVEDDMLPIFRKGEEFNYGVEFVLLIKFLQDSFGKPLEDALNSLERLTIDNPSLIVQYTQGLNFNPSCKE

Query:  FTHGVVIRFRSIKAFEIFTGSSDYKDVWKSKFQPIIQKTVSLHFSVDPVGTEIM
        FTHGVVIRFRSI AFEIFTGSS YKD+WKSKFQPIIQKTV+LHFSVDPVGTEIM
Subjt:  FTHGVVIRFRSIKAFEIFTGSSDYKDVWKSKFQPIIQKTVSLHFSVDPVGTEIM

XP_022931509.1 stress-response A/B barrel domain-containing protein UP3 [Cucurbita moschata]

1.2e-97

78.4

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Query:  MGRRNESMSRISASGEHSPTIILGKKRKVFEHISLLKAKENISEEEENNMLDYLYTTQYQMRGIVAVSLG-------EFLAFLLFKTMERSELRVKFTFL
        MGRRNE +SRISASGEHSPT   GKKRKVFEHISLLKA+ENISEEEEN++LDYLYTTQYQMRGIVAVSLG       E     ++   +R E   KF   
Subjt:  MGRRNESMSRISASGEHSPTIILGKKRKVFEHISLLKAKENISEEEENNMLDYLYTTQYQMRGIVAVSLG-------EFLAFLLFKTMERSELRVKFTFL

Query:  LILQDVLVIIIMKAIPMGLIHVDYESEVEDDMLPIFRKGEEFNYGVEFVLLIKFLQDSFGKPLEDALNSLERLTIDNPSLIVQYTQGLNFNPSCKEFTHG
             VL   +M     GLIHVDYESEVEDDMLPIFRKGEEFNYGVEFVLLIKFLQDSFGKPLEDALNSLE+L IDNPSLIVQ+TQGLNFNPSCKEFTHG
Subjt:  LILQDVLVIIIMKAIPMGLIHVDYESEVEDDMLPIFRKGEEFNYGVEFVLLIKFLQDSFGKPLEDALNSLERLTIDNPSLIVQYTQGLNFNPSCKEFTHG

Query:  VVIRFRSIKAFEIFTGSSDYKDVWKSKFQPIIQKTVSLHFSVDPVGTEIM
        VVIRFRSI+AFE+FTGSSDYKD+W+SKFQPIIQKTVSLHFSVDPVGTEIM
Subjt:  VVIRFRSIKAFEIFTGSSDYKDVWKSKFQPIIQKTVSLHFSVDPVGTEIM

XP_022985456.1 stress-response A/B barrel domain-containing protein UP3 isoform X1 [Cucurbita maxima]

1.6e-97

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Query:  MGRRNESMSRISASGEHSPTIILGKKRKVFEHISLLKAKENISEEEENNMLDYLYTTQYQMRGIVAVSLG-------EFLAFLLFKTMERSELRVKFTFL
        MGRRNE +SRISASGEHSPT  LGKKRKVFEHISLLKA+ENISEEEEN++LDYLYTTQYQMRGIVAVSLG       E     ++   +R E   KF   
Subjt:  MGRRNESMSRISASGEHSPTIILGKKRKVFEHISLLKAKENISEEEENNMLDYLYTTQYQMRGIVAVSLG-------EFLAFLLFKTMERSELRVKFTFL

Query:  LILQDVLVIIIMKAIPMGLIHVDYESEVEDDMLPIFRKGEEFNYGVEFVLLIKFLQDSFGKPLEDALNSLERLTIDNPSLIVQYTQGLNFNPSCKEFTHG
             +L   +M     GLIHVDYESEVEDDMLPIFRKGEEFNYGVEFVLLIKFLQDSFGKPLEDALNSLE+L IDNPSLIVQ+TQGLNFNPSCKEFTHG
Subjt:  LILQDVLVIIIMKAIPMGLIHVDYESEVEDDMLPIFRKGEEFNYGVEFVLLIKFLQDSFGKPLEDALNSLERLTIDNPSLIVQYTQGLNFNPSCKEFTHG

Query:  VVIRFRSIKAFEIFTGSSDYKDVWKSKFQPIIQKTVSLHFSVDPVGTEIM
        VVIRFRSI+AFE+FTGSSDYKD+W+SKFQPIIQKTVSL+FSVDPVGTEIM
Subjt:  VVIRFRSIKAFEIFTGSSDYKDVWKSKFQPIIQKTVSLHFSVDPVGTEIM

XP_023552209.1 stress-response A/B barrel domain-containing protein UP3 isoform X1 [Cucurbita pepo subsp. pepo]

1.2e-97

78.4

Show/hide

Query:  MGRRNESMSRISASGEHSPTIILGKKRKVFEHISLLKAKENISEEEENNMLDYLYTTQYQMRGIVAVSLG-------EFLAFLLFKTMERSELRVKFTFL
        MGRRNE +SRISASGEHSPT   GKKRKVFEHISLLKA+ENISEEEEN++LDYLYTTQYQMRGIVAVSLG       E     ++   +R E   KF   
Subjt:  MGRRNESMSRISASGEHSPTIILGKKRKVFEHISLLKAKENISEEEENNMLDYLYTTQYQMRGIVAVSLG-------EFLAFLLFKTMERSELRVKFTFL

Query:  LILQDVLVIIIMKAIPMGLIHVDYESEVEDDMLPIFRKGEEFNYGVEFVLLIKFLQDSFGKPLEDALNSLERLTIDNPSLIVQYTQGLNFNPSCKEFTHG
             VL   +M     GLIHVDYESEVEDDMLPIFRKGEEFNYGVEFVLLIKFLQDSFGKPLEDALNSLE+L IDNPSLIVQ+TQGLNFNPSCKEFTHG
Subjt:  LILQDVLVIIIMKAIPMGLIHVDYESEVEDDMLPIFRKGEEFNYGVEFVLLIKFLQDSFGKPLEDALNSLERLTIDNPSLIVQYTQGLNFNPSCKEFTHG

Query:  VVIRFRSIKAFEIFTGSSDYKDVWKSKFQPIIQKTVSLHFSVDPVGTEIM
        VVIRFRSI+AFE+FTGSSDYKD+W+SKFQPIIQKTVSLHFSVDPVGTEIM
Subjt:  VVIRFRSIKAFEIFTGSSDYKDVWKSKFQPIIQKTVSLHFSVDPVGTEIM

XP_038896518.1 stress-response A/B barrel domain-containing protein UP3 [Benincasa hispida]

3.6e-102

82.4

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Query:  MGRRNESMSRISASGEHSPTIILGKKRKVFEHISLLKAKENISEEEENNMLDYLYTTQYQMRGIVAVSLG-------EFLAFLLFKTMERSELRVKFTFL
        MGRRNESMSRISASGEH+PTIILGKKRKVFEHISLLKAKENISEEEEN+MLDYLYTTQYQM+GIVAVSLG       E     ++   +R E   KF   
Subjt:  MGRRNESMSRISASGEHSPTIILGKKRKVFEHISLLKAKENISEEEENNMLDYLYTTQYQMRGIVAVSLG-------EFLAFLLFKTMERSELRVKFTFL

Query:  LILQDVLVIIIMKAIPMGLIHVDYESEVEDDMLPIFRKGEEFNYGVEFVLLIKFLQDSFGKPLEDALNSLERLTIDNPSLIVQYTQGLNFNPSCKEFTHG
             VL   +M     GLIHVDYESEVEDDMLPIFRKGEEFNYGVEFVLLIKFLQDSFGKPLEDALNSLERLTIDNPSLIVQ TQGLNFNPSCKEFTHG
Subjt:  LILQDVLVIIIMKAIPMGLIHVDYESEVEDDMLPIFRKGEEFNYGVEFVLLIKFLQDSFGKPLEDALNSLERLTIDNPSLIVQYTQGLNFNPSCKEFTHG

Query:  VVIRFRSIKAFEIFTGSSDYKDVWKSKFQPIIQKTVSLHFSVDPVGTEIM
        VVIRFRSIKAFEIFTGSSDYKD+WKSKFQPIIQKTVSLHFSVDPVGTEIM
Subjt:  VVIRFRSIKAFEIFTGSSDYKDVWKSKFQPIIQKTVSLHFSVDPVGTEIM

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KUW3 Uncharacterized protein

1.2e-98

77.17

Show/hide

Query:  MGRRNESMSRISASGEHSPTIILGKKRKVFEHISLLKAKENISEEEENNMLDYLYTTQYQMRGIVAVSLGEFL----------AFLLFKTMERSE-LRVK
        +GRR ESMSRISASGEH+PTII+GKKRKVFEHISLLKAKENISEEEEN+MLDYLYTTQYQMRGIVAVSLG              ++ F++ E  E   V 
Subjt:  MGRRNESMSRISASGEHSPTIILGKKRKVFEHISLLKAKENISEEEENNMLDYLYTTQYQMRGIVAVSLGEFL----------AFLLFKTMERSE-LRVK

Query:  FTFLLILQDVLVIIIMKAIPMGLIHVDYESEVEDDMLPIFRKGEEFNYGVEFVLLIKFLQDSFGKPLEDALNSLERLTIDNPSLIVQYTQGLNFNPSCKE
          +L +L + ++         GL+HVDY+SEVEDDMLPIFRKGEEFNYGVEFVLLIKF QDSFGKPLEDALNSLERLTIDNPSLIVQ+TQGLNFNPSCKE
Subjt:  FTFLLILQDVLVIIIMKAIPMGLIHVDYESEVEDDMLPIFRKGEEFNYGVEFVLLIKFLQDSFGKPLEDALNSLERLTIDNPSLIVQYTQGLNFNPSCKE

Query:  FTHGVVIRFRSIKAFEIFTGSSDYKDVWKSKFQPIIQKTVSLHFSVDPVGTEIM
        FTHGVVIRFRSI AFEIFTGSS YKD+WKSKFQPIIQKTV+LHFSVDPVGTEIM
Subjt:  FTHGVVIRFRSIKAFEIFTGSSDYKDVWKSKFQPIIQKTVSLHFSVDPVGTEIM

A0A1S4DYT7 stress-response A/B barrel domain-containing protein UP3 isoform X1

2.2e-97

75.98

Show/hide

Query:  MGRRNESMSRISASGEHSPTIILGKKRKVFEHISLLKAKENISEEEENNMLDYLYTTQYQMRGIVAVSLGEFL----------AFLLFKTMERSE-LRVK
        +GRR ESMSRISASGEH+PTIILGKKRKVFEHISLLKAKENISE+EEN+MLDYLYTTQYQMRGIVAVSLG              ++ F++ E  E   V 
Subjt:  MGRRNESMSRISASGEHSPTIILGKKRKVFEHISLLKAKENISEEEENNMLDYLYTTQYQMRGIVAVSLGEFL----------AFLLFKTMERSE-LRVK

Query:  FTFLLILQDVLVIIIMKAIPMGLIHVDYESEVEDDMLPIFRKGEEFNYGVEFVLLIKFLQDSFGKPLEDALNSLERLTIDNPSLIVQYTQGLNFNPSCKE
          +L +L + ++         GL+HVDYESEVEDDMLPIFRKGEEFNYGVEFVLLIKF QDSFGKPLEDALNSLERLTIDNPSLIVQ+TQGLNFNP+CKE
Subjt:  FTFLLILQDVLVIIIMKAIPMGLIHVDYESEVEDDMLPIFRKGEEFNYGVEFVLLIKFLQDSFGKPLEDALNSLERLTIDNPSLIVQYTQGLNFNPSCKE

Query:  FTHGVVIRFRSIKAFEIFTGSSDYKDVWKSKFQPIIQKTVSLHFSVDPVGTEIM
        FTHGVVIRFRSI AFEIFT S++YKD WKSKFQPI+QKTV LHFSVDPVGTEIM
Subjt:  FTHGVVIRFRSIKAFEIFTGSSDYKDVWKSKFQPIIQKTVSLHFSVDPVGTEIM

A0A6J1C445 stress-response A/B barrel domain-containing protein UP3

5.0e-94

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Query:  MGRRNESMSRISASGEHSPTIILGKKRKVFEHISLLKAKENISEEEENNMLDYLYTTQYQMRGIVAVSLG-------EFLAFLLFKTMERSELRVKFTFL
        +GRR+   S+ISASGEHSPT  LGKKRKVFEHISLLKAKENISE+EEN+MLDYLYTTQYQM GIVAVSLG       E     ++   +R E   KF   
Subjt:  MGRRNESMSRISASGEHSPTIILGKKRKVFEHISLLKAKENISEEEENNMLDYLYTTQYQMRGIVAVSLG-------EFLAFLLFKTMERSELRVKFTFL

Query:  LILQDVLVIIIMKAIPMGLIHVDYESEVEDDMLPIFRKGEEFNYGVEFVLLIKFLQDSFGKPLEDALNSLERLTIDNPSLIVQYTQGLNFNPSCKEFTHG
             VL   +M     GLIHVDYESEVEDDMLPIFRKGEEFNYGVEFVLLIKFLQDSFG+PLEDALNSLERLTI NPSLIVQ+TQG NFNPSCKEFTHG
Subjt:  LILQDVLVIIIMKAIPMGLIHVDYESEVEDDMLPIFRKGEEFNYGVEFVLLIKFLQDSFGKPLEDALNSLERLTIDNPSLIVQYTQGLNFNPSCKEFTHG

Query:  VVIRFRSIKAFEIFTGSSDYKDVWKSKFQPIIQKTVSLHFSVDPVGTEIM
        +VIRFRSI AFEIFTG SDYK++W+SKFQPIIQKTVSLHFSVDPVGTEIM
Subjt:  VVIRFRSIKAFEIFTGSSDYKDVWKSKFQPIIQKTVSLHFSVDPVGTEIM

A0A6J1EUF6 stress-response A/B barrel domain-containing protein UP3

5.8e-98

78.4

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Query:  MGRRNESMSRISASGEHSPTIILGKKRKVFEHISLLKAKENISEEEENNMLDYLYTTQYQMRGIVAVSLG-------EFLAFLLFKTMERSELRVKFTFL
        MGRRNE +SRISASGEHSPT   GKKRKVFEHISLLKA+ENISEEEEN++LDYLYTTQYQMRGIVAVSLG       E     ++   +R E   KF   
Subjt:  MGRRNESMSRISASGEHSPTIILGKKRKVFEHISLLKAKENISEEEENNMLDYLYTTQYQMRGIVAVSLG-------EFLAFLLFKTMERSELRVKFTFL

Query:  LILQDVLVIIIMKAIPMGLIHVDYESEVEDDMLPIFRKGEEFNYGVEFVLLIKFLQDSFGKPLEDALNSLERLTIDNPSLIVQYTQGLNFNPSCKEFTHG
             VL   +M     GLIHVDYESEVEDDMLPIFRKGEEFNYGVEFVLLIKFLQDSFGKPLEDALNSLE+L IDNPSLIVQ+TQGLNFNPSCKEFTHG
Subjt:  LILQDVLVIIIMKAIPMGLIHVDYESEVEDDMLPIFRKGEEFNYGVEFVLLIKFLQDSFGKPLEDALNSLERLTIDNPSLIVQYTQGLNFNPSCKEFTHG

Query:  VVIRFRSIKAFEIFTGSSDYKDVWKSKFQPIIQKTVSLHFSVDPVGTEIM
        VVIRFRSI+AFE+FTGSSDYKD+W+SKFQPIIQKTVSLHFSVDPVGTEIM
Subjt:  VVIRFRSIKAFEIFTGSSDYKDVWKSKFQPIIQKTVSLHFSVDPVGTEIM

A0A6J1J4Y2 stress-response A/B barrel domain-containing protein UP3 isoform X1

7.5e-98

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Query:  MGRRNESMSRISASGEHSPTIILGKKRKVFEHISLLKAKENISEEEENNMLDYLYTTQYQMRGIVAVSLG-------EFLAFLLFKTMERSELRVKFTFL
        MGRRNE +SRISASGEHSPT  LGKKRKVFEHISLLKA+ENISEEEEN++LDYLYTTQYQMRGIVAVSLG       E     ++   +R E   KF   
Subjt:  MGRRNESMSRISASGEHSPTIILGKKRKVFEHISLLKAKENISEEEENNMLDYLYTTQYQMRGIVAVSLG-------EFLAFLLFKTMERSELRVKFTFL

Query:  LILQDVLVIIIMKAIPMGLIHVDYESEVEDDMLPIFRKGEEFNYGVEFVLLIKFLQDSFGKPLEDALNSLERLTIDNPSLIVQYTQGLNFNPSCKEFTHG
             +L   +M     GLIHVDYESEVEDDMLPIFRKGEEFNYGVEFVLLIKFLQDSFGKPLEDALNSLE+L IDNPSLIVQ+TQGLNFNPSCKEFTHG
Subjt:  LILQDVLVIIIMKAIPMGLIHVDYESEVEDDMLPIFRKGEEFNYGVEFVLLIKFLQDSFGKPLEDALNSLERLTIDNPSLIVQYTQGLNFNPSCKEFTHG

Query:  VVIRFRSIKAFEIFTGSSDYKDVWKSKFQPIIQKTVSLHFSVDPVGTEIM
        VVIRFRSI+AFE+FTGSSDYKD+W+SKFQPIIQKTVSL+FSVDPVGTEIM
Subjt:  VVIRFRSIKAFEIFTGSSDYKDVWKSKFQPIIQKTVSLHFSVDPVGTEIM

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT2G32500.1 Stress responsive alpha-beta barrel domain protein

7.3e-61

54.78

Show/hide

Query:  KKRKVFEHISLLKAKENISEEEENNMLDYLYTTQYQMRGIVAVSLG-------EFLAFLLFKTMERSELRVKF----TFLLILQDVLVIIIMKAIPMGLI
        K RKV EH+ LLKAKE +SEE E +MLDYLYTTQYQMRGIVA+S+G       E+    L+   ++ E   KF     FL +L + +          GL 
Subjt:  KKRKVFEHISLLKAKENISEEEENNMLDYLYTTQYQMRGIVAVSLG-------EFLAFLLFKTMERSELRVKF----TFLLILQDVLVIIIMKAIPMGLI

Query:  HVDYESEVEDDMLPIFRKGEEFNYGVEFVLLIKFLQDSFGKPLEDALNSLERLTIDNPSLIVQYTQGLNFNPSCKEFTHGVVIRFRSIKAFEIFTGSSDY
        +VDYESEVEDD+L IFRKGEE+NYG EFVLLI F + +  K  +DA++S  +LT   PSLIVQ TQG NFN S KEFTH  V+RFRS  A EIF    +Y
Subjt:  HVDYESEVEDDMLPIFRKGEEFNYGVEFVLLIKFLQDSFGKPLEDALNSLERLTIDNPSLIVQYTQGLNFNPSCKEFTHGVVIRFRSIKAFEIFTGSSDY

Query:  KDVWKSKFQPIIQKTVSLHFSVDPVGTEIM
        KD+W+S+F+P I+K+ +LHFSVDPVGT++M
Subjt:  KDVWKSKFQPIIQKTVSLHFSVDPVGTEIM

Sequences

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CDS sequence

Show/hide CDS sequence

ATGGGGCGACGAAATGAATCAATGTCAAGGATTTCAGCTTCCGGAGAGCACAGTCCCACCATCATTTTGGGGAAGAAAAGAAAGGTTTTCGAACACATTTCTCTGCTCAA
AGCGAAGGAAAATATTTCTGAAGAAGAAGAGAACAATATGCTTGATTATCTCTATACCACGCAGTATCAAATGAGGGGCATTGTTGCCGTTTCATTAGGCGAGTTTCTGG
CCTTTCTGCTTTTTAAAACTATGGAACGTTCAGAACTTCGTGTGAAGTTTACTTTCCTTTTAATTCTGCAGGACGTGCTTGTGATCATAATAATGAAAGCTATACCCATG
GGACTGATTCATGTAGATTATGAATCAGAGGTGGAAGATGACATGCTTCCCATATTTCGGAAAGGAGAGGAGTTCAATTACGGTGTAGAGTTTGTGCTTCTCATTAAGTT
TCTTCAAGATTCATTTGGCAAACCTTTAGAAGATGCTCTAAATTCTCTCGAGAGACTGACAATTGATAATCCGTCCTTAATCGTCCAGTATACGCAAGGTTTAAATTTTA
ATCCCAGTTGTAAGGAGTTCACACATGGAGTTGTTATAAGATTTCGGTCAATCAAAGCCTTCGAGATATTTACAGGCAGCTCAGATTACAAAGATGTGTGGAAGTCTAAA
TTCCAACCGATCATCCAGAAAACAGTGTCTCTTCACTTCTCTGTTGACCCAGTAGGGACGGAGATCATGTAG

mRNA sequence

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Protein sequence

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MGRRNESMSRISASGEHSPTIILGKKRKVFEHISLLKAKENISEEEENNMLDYLYTTQYQMRGIVAVSLGEFLAFLLFKTMERSELRVKFTFLLILQDVLVIIIMKAIPM
GLIHVDYESEVEDDMLPIFRKGEEFNYGVEFVLLIKFLQDSFGKPLEDALNSLERLTIDNPSLIVQYTQGLNFNPSCKEFTHGVVIRFRSIKAFEIFTGSSDYKDVWKSK
FQPIIQKTVSLHFSVDPVGTEIM

HG10002673 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome