; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

HG10002680 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10002680
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
Genome locationChr11:9747887..9752718
RNA-Seq ExpressionHG10002680
SyntenyHG10002680
Gene Ontology termsGO:0015995 - chlorophyll biosynthetic process (biological process)
GO:0016117 - carotenoid biosynthetic process (biological process)
GO:0019288 - isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway (biological process)
GO:0008685 - 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR003526 - 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
IPR020555 - 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, conserved site
IPR036571 - 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6600551.1 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]1.2e-9488.29Show/hide
Query:  KRNFTAVSSSSSLPSFRLNSAASPSVASTTAV------KSDSPSKTLPFRVGHGFDLHRLEPGYPLIIGGITIPHDRGCEAHSDGDVLLHCVVDAILGAL
        + NF  VSSSSS PS R+NSAASPSV + TAV       SDS SK LPFR+GHGFDLHRLEPGYPLIIGGI IPHDRGCEAHSDGDVLLHCVVDAILGAL
Subjt:  KRNFTAVSSSSSLPSFRLNSAASPSVASTTAV------KSDSPSKTLPFRVGHGFDLHRLEPGYPLIIGGITIPHDRGCEAHSDGDVLLHCVVDAILGAL

Query:  GLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMHEAGYDIGNLDATLILQRPKLSPHKEAIRANLSELLGADPSVVNLKAKTHEKVDSLGENRSIAAHTVV
        GLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMHEAGY+IGNLDATLILQRPKLSPHKEAIRANLS LLGADPSVVNLKAKTHEKVDSLGENRSIAAHTVV
Subjt:  GLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMHEAGYDIGNLDATLILQRPKLSPHKEAIRANLSELLGADPSVVNLKAKTHEKVDSLGENRSIAAHTVV

Query:  LLMSR
        LLM R
Subjt:  LLMSR

XP_004146533.1 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, chloroplastic [Cucumis sativus]3.9e-9894.36Show/hide
Query:  TAVSSSSSLPSFRLNSAASPSVASTTAVKSDSPSKTLPFRVGHGFDLHRLEPGYPLIIGGITIPHDRGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFP
        ++ SSSSSLPSFR+NSAAS SV+STTA+KSDSPSKTLPFRVGHGFDLHRLEPGYPLIIGGI+IPHDRGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFP
Subjt:  TAVSSSSSLPSFRLNSAASPSVASTTAVKSDSPSKTLPFRVGHGFDLHRLEPGYPLIIGGITIPHDRGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFP

Query:  DSDPKWKGAPSSVFIKEAVRLMHEAGYDIGNLDATLILQRPKLSPHKEAIRANLSELLGADPSVVNLKAKTHEKVDSLGENRSIAAHTVVLLMSR
        DSDPKWKGA SSVFIKEAVRLMHEAGYDIGNLDATLILQRPKLSPHKEAIRA LSELLGADPSVVNLKAKTHEKVDSLGENRSIAAHTVVLLM R
Subjt:  DSDPKWKGAPSSVFIKEAVRLMHEAGYDIGNLDATLILQRPKLSPHKEAIRANLSELLGADPSVVNLKAKTHEKVDSLGENRSIAAHTVVLLMSR

XP_008452007.1 PREDICTED: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, chloroplastic [Cucumis melo]1.1e-10089.15Show/hide
Query:  ESFKAQFFSIRVNKRNFTAVSSSSSLPSFRLNSAASPSVASTTAVKSDSPSKTLPFRVGHGFDLHRLEPGYPLIIGGITIPHDRGCEAHSDGDVLLHCVV
        +S    F+     +R FT +SSSSSLPSFR+NSA S SV+STTA++SDSPSKTLPFRVGHGFDLHRLEPGYPLIIGGI+IPHDRGCEAHSDGDVLLHCVV
Subjt:  ESFKAQFFSIRVNKRNFTAVSSSSSLPSFRLNSAASPSVASTTAVKSDSPSKTLPFRVGHGFDLHRLEPGYPLIIGGITIPHDRGCEAHSDGDVLLHCVV

Query:  DAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMHEAGYDIGNLDATLILQRPKLSPHKEAIRANLSELLGADPSVVNLKAKTHEKVDSLGENRS
        DAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMHEAGYDIGNLDATLILQRPKLSPHKEAIRANLSELLGADPSVVNLKAKTHEKVDSLGENRS
Subjt:  DAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMHEAGYDIGNLDATLILQRPKLSPHKEAIRANLSELLGADPSVVNLKAKTHEKVDSLGENRS

Query:  IAAHTVVLLMSR
        IAAHTVVLLM R
Subjt:  IAAHTVVLLMSR

XP_023548820.1 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, chloroplastic-like [Cucurbita pepo subsp. pepo]1.5e-9487.8Show/hide
Query:  KRNFTAVSSSSSLPSFRLNSAASPSVASTTAV------KSDSPSKTLPFRVGHGFDLHRLEPGYPLIIGGITIPHDRGCEAHSDGDVLLHCVVDAILGAL
        + NF  VSSSSS PS R+NSAASPSV + TAV       SDS SK LPFR+GHGFDLHRLEPGYPLIIGGI IPHDRGCEAHSDGDVLLHCVVDAILGAL
Subjt:  KRNFTAVSSSSSLPSFRLNSAASPSVASTTAV------KSDSPSKTLPFRVGHGFDLHRLEPGYPLIIGGITIPHDRGCEAHSDGDVLLHCVVDAILGAL

Query:  GLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMHEAGYDIGNLDATLILQRPKLSPHKEAIRANLSELLGADPSVVNLKAKTHEKVDSLGENRSIAAHTVV
        GLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMH+AGY+IGNLDATLILQRPKLSPHKEAIRANLS+LLGADPSVVNLKAKTHEKVDSLGENRSIAAHTVV
Subjt:  GLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMHEAGYDIGNLDATLILQRPKLSPHKEAIRANLSELLGADPSVVNLKAKTHEKVDSLGENRSIAAHTVV

Query:  LLMSR
        LLM R
Subjt:  LLMSR

XP_038877996.1 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, chloroplastic [Benincasa hispida]1.7e-10191Show/hide
Query:  ESFKAQFFSIRVNKRNFTAV-SSSSSLPSFRLNSAASPSVASTTAVKSDSPSKTLPFRVGHGFDLHRLEPGYPLIIGGITIPHDRGCEAHSDGDVLLHCV
        +S    F+     +RNFTAV SSSSSLPSFR+ SAASPSVA TTAVKSDSPSKTLPFRVGHGFDLHRLEPGYPLIIGGI+IPHDRGCEAHSDGDVLLHCV
Subjt:  ESFKAQFFSIRVNKRNFTAV-SSSSSLPSFRLNSAASPSVASTTAVKSDSPSKTLPFRVGHGFDLHRLEPGYPLIIGGITIPHDRGCEAHSDGDVLLHCV

Query:  VDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMHEAGYDIGNLDATLILQRPKLSPHKEAIRANLSELLGADPSVVNLKAKTHEKVDSLGENR
        VDAILGALGLPDIGQIFPDSDPKWKGAPSSVF+KEAVRLMHEAGYDIGNLDATLILQRPKLSPHKEAIRANLSELLG DPSVVNLKAKTHEKVDSLGENR
Subjt:  VDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMHEAGYDIGNLDATLILQRPKLSPHKEAIRANLSELLGADPSVVNLKAKTHEKVDSLGENR

Query:  SIAAHTVVLLM
        SIAAHTVVLLM
Subjt:  SIAAHTVVLLM

TrEMBL top hitse value%identityAlignment
A0A0A0KWV1 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase1.9e-9894.36Show/hide
Query:  TAVSSSSSLPSFRLNSAASPSVASTTAVKSDSPSKTLPFRVGHGFDLHRLEPGYPLIIGGITIPHDRGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFP
        ++ SSSSSLPSFR+NSAAS SV+STTA+KSDSPSKTLPFRVGHGFDLHRLEPGYPLIIGGI+IPHDRGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFP
Subjt:  TAVSSSSSLPSFRLNSAASPSVASTTAVKSDSPSKTLPFRVGHGFDLHRLEPGYPLIIGGITIPHDRGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFP

Query:  DSDPKWKGAPSSVFIKEAVRLMHEAGYDIGNLDATLILQRPKLSPHKEAIRANLSELLGADPSVVNLKAKTHEKVDSLGENRSIAAHTVVLLMSR
        DSDPKWKGA SSVFIKEAVRLMHEAGYDIGNLDATLILQRPKLSPHKEAIRA LSELLGADPSVVNLKAKTHEKVDSLGENRSIAAHTVVLLM R
Subjt:  DSDPKWKGAPSSVFIKEAVRLMHEAGYDIGNLDATLILQRPKLSPHKEAIRANLSELLGADPSVVNLKAKTHEKVDSLGENRSIAAHTVVLLMSR

A0A1S3BTZ8 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase5.3e-10189.15Show/hide
Query:  ESFKAQFFSIRVNKRNFTAVSSSSSLPSFRLNSAASPSVASTTAVKSDSPSKTLPFRVGHGFDLHRLEPGYPLIIGGITIPHDRGCEAHSDGDVLLHCVV
        +S    F+     +R FT +SSSSSLPSFR+NSA S SV+STTA++SDSPSKTLPFRVGHGFDLHRLEPGYPLIIGGI+IPHDRGCEAHSDGDVLLHCVV
Subjt:  ESFKAQFFSIRVNKRNFTAVSSSSSLPSFRLNSAASPSVASTTAVKSDSPSKTLPFRVGHGFDLHRLEPGYPLIIGGITIPHDRGCEAHSDGDVLLHCVV

Query:  DAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMHEAGYDIGNLDATLILQRPKLSPHKEAIRANLSELLGADPSVVNLKAKTHEKVDSLGENRS
        DAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMHEAGYDIGNLDATLILQRPKLSPHKEAIRANLSELLGADPSVVNLKAKTHEKVDSLGENRS
Subjt:  DAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMHEAGYDIGNLDATLILQRPKLSPHKEAIRANLSELLGADPSVVNLKAKTHEKVDSLGENRS

Query:  IAAHTVVLLMSR
        IAAHTVVLLM R
Subjt:  IAAHTVVLLMSR

A0A5D3D287 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase5.3e-10189.15Show/hide
Query:  ESFKAQFFSIRVNKRNFTAVSSSSSLPSFRLNSAASPSVASTTAVKSDSPSKTLPFRVGHGFDLHRLEPGYPLIIGGITIPHDRGCEAHSDGDVLLHCVV
        +S    F+     +R FT +SSSSSLPSFR+NSA S SV+STTA++SDSPSKTLPFRVGHGFDLHRLEPGYPLIIGGI+IPHDRGCEAHSDGDVLLHCVV
Subjt:  ESFKAQFFSIRVNKRNFTAVSSSSSLPSFRLNSAASPSVASTTAVKSDSPSKTLPFRVGHGFDLHRLEPGYPLIIGGITIPHDRGCEAHSDGDVLLHCVV

Query:  DAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMHEAGYDIGNLDATLILQRPKLSPHKEAIRANLSELLGADPSVVNLKAKTHEKVDSLGENRS
        DAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMHEAGYDIGNLDATLILQRPKLSPHKEAIRANLSELLGADPSVVNLKAKTHEKVDSLGENRS
Subjt:  DAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMHEAGYDIGNLDATLILQRPKLSPHKEAIRANLSELLGADPSVVNLKAKTHEKVDSLGENRS

Query:  IAAHTVVLLMSR
        IAAHTVVLLM R
Subjt:  IAAHTVVLLMSR

A0A6J1FX89 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase2.8e-9487.8Show/hide
Query:  KRNFTAVSSSSSLPSFRLNSAASPSVASTTAV------KSDSPSKTLPFRVGHGFDLHRLEPGYPLIIGGITIPHDRGCEAHSDGDVLLHCVVDAILGAL
        + NF  VSSSSS PS R+NSAASPSV + TAV       SDS SK LPFR+GHGFDLHRLEPGYPLIIGGI IPHDRGCEAHSDGDVLLHCVVDAILGAL
Subjt:  KRNFTAVSSSSSLPSFRLNSAASPSVASTTAV------KSDSPSKTLPFRVGHGFDLHRLEPGYPLIIGGITIPHDRGCEAHSDGDVLLHCVVDAILGAL

Query:  GLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMHEAGYDIGNLDATLILQRPKLSPHKEAIRANLSELLGADPSVVNLKAKTHEKVDSLGENRSIAAHTVV
        GLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMHEAGY+IGNLDATLILQRPKLSPHKEAIRANLS+LLGAD SVVNLKAKTHEKVDSLGENRSIAAHTVV
Subjt:  GLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMHEAGYDIGNLDATLILQRPKLSPHKEAIRANLSELLGADPSVVNLKAKTHEKVDSLGENRSIAAHTVV

Query:  LLMSR
        LLM R
Subjt:  LLMSR

A0A6J1J2X8 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase6.3e-9487.8Show/hide
Query:  KRNFTAVSSSSSLPSFRLNSAASPSVASTTAV------KSDSPSKTLPFRVGHGFDLHRLEPGYPLIIGGITIPHDRGCEAHSDGDVLLHCVVDAILGAL
        + NF  VSSSSS PS R+NSAASPSV + TAV       SDS SK LPFR+GHGFDLHRLEPGYPLIIGGI IPHDRGCEAHSDGDVLLHCVVDAILGAL
Subjt:  KRNFTAVSSSSSLPSFRLNSAASPSVASTTAV------KSDSPSKTLPFRVGHGFDLHRLEPGYPLIIGGITIPHDRGCEAHSDGDVLLHCVVDAILGAL

Query:  GLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMHEAGYDIGNLDATLILQRPKLSPHKEAIRANLSELLGADPSVVNLKAKTHEKVDSLGENRSIAAHTVV
        GLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMHEAGY+IGNLDATLILQRPKLSPHKEAIRANLS LLGAD SVVNLKAKTHEKVDSLGENRSIAAHTVV
Subjt:  GLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMHEAGYDIGNLDATLILQRPKLSPHKEAIRANLSELLGADPSVVNLKAKTHEKVDSLGENRSIAAHTVV

Query:  LLMSR
        LLM R
Subjt:  LLMSR

SwissProt top hitse value%identityAlignment
B8GQ78 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase6.4e-4350.97Show/hide
Query:  RVGHGFDLHRLEPGYPLIIGGITIPHDRGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMHEAGYDIGNLDATLILQ
        R+GHG+D+H  + G  +++GG+ IPH +   AHSDGDVL+H + DA+LGA  L DIG+ FPD+DP +KGA S V ++  V L+HE GY +GN+DAT+I Q
Subjt:  RVGHGFDLHRLEPGYPLIIGGITIPHDRGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMHEAGYDIGNLDATLILQ

Query:  RPKLSPHKEAIRANLSELLGADPSVVNLKAKTHEKVDSLGENRSIAAHTVVLLMS
         PK++PH EA+RANL++ LG     VN+KA T E++   G    IAAH V L+ S
Subjt:  RPKLSPHKEAIRANLSELLGADPSVVNLKAKTHEKVDSLGENRSIAAHTVVLLMS

Q1LLZ4 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase8.3e-4353.21Show/hide
Query:  RVGHGFDLHRLEPGYPLIIGGITIPHDRGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMHEAGYDIGNLDATLILQ
        R+G G+D+H L PG  LI+GG+ IPHDRG   HSD D LLH V DA+ GA  L DIG+ FPD+DP + GA S V ++EAVR + EAGY+IGN+DAT+I Q
Subjt:  RVGHGFDLHRLEPGYPLIIGGITIPHDRGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMHEAGYDIGNLDATLILQ

Query:  RPKLSPHKEAIRANLSELLGADPSVVNLKAKTHEKVDSLGENRSIAAHTVVLLMSR
        +PKL+PH   + ANL+E LG   +  N+KAKT+EK+   G+   I A   VL+  R
Subjt:  RPKLSPHKEAIRANLSELLGADPSVVNLKAKTHEKVDSLGENRSIAAHTVVLLMSR

Q6EPN6 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, chloroplastic2.2e-8076.14Show/hide
Query:  SSSSSLPSFRLN-----SAASPSVASTTAVKSDSPSKTLPFRVGHGFDLHRLEPGYPLIIGGITIPHDRGCEAHSDGDVLLHCVVDAILGALGLPDIGQI
        S+S + PS RL      +AA+       AV +      LPFRVGHGFDLHRLEPG PLIIGGI IPHDRGC+AHSDGDVLLHCVVDAILGALGLPDIGQI
Subjt:  SSSSSLPSFRLN-----SAASPSVASTTAVKSDSPSKTLPFRVGHGFDLHRLEPGYPLIIGGITIPHDRGCEAHSDGDVLLHCVVDAILGALGLPDIGQI

Query:  FPDSDPKWKGAPSSVFIKEAVRLMHEAGYDIGNLDATLILQRPKLSPHKEAIRANLSELLGADPSVVNLKAKTHEKVDSLGENRSIAAHTVVLLMSR
        FPDSDP+WKGA SSVF++EAV+LMHEAGY++GNLDATLILQ+PK+SP KE IR+NL +LLGADPSVVNLKAKTHEKVDSLGENRSIAAHTVVLLM +
Subjt:  FPDSDPKWKGAPSSVFIKEAVRLMHEAGYDIGNLDATLILQRPKLSPHKEAIRANLSELLGADPSVVNLKAKTHEKVDSLGENRSIAAHTVVLLMSR

Q9CAK8 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, chloroplastic1.1e-8787.22Show/hide
Query:  SAASPSVASTTAVKSDSPSKTLPFRVGHGFDLHRLEPGYPLIIGGITIPHDRGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFI
        SAAS +V    +V S+ P+KTLPFR+GHGFDLHRLEPGYPLIIGGI IPHDRGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGA SSVFI
Subjt:  SAASPSVASTTAVKSDSPSKTLPFRVGHGFDLHRLEPGYPLIIGGITIPHDRGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFI

Query:  KEAVRLMHEAGYDIGNLDATLILQRPKLSPHKEAIRANLSELLGADPSVVNLKAKTHEKVDSLGENRSIAAHTVVLLMSR
        KEAVRLM EAGY+IGNLDATLILQRPK+SPHKE IR+NLS+LLGADPSVVNLKAKTHEKVDSLGENRSIAAHTV+LLM +
Subjt:  KEAVRLMHEAGYDIGNLDATLILQRPKLSPHKEAIRANLSELLGADPSVVNLKAKTHEKVDSLGENRSIAAHTVVLLMSR

Q9M4W3 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, chloroplastic4.3e-8475Show/hide
Query:  NKRNF--TAVSSSSSLPSF--------RLNSAASPSVASTTAVKSD------SPSKTLPFRVGHGFDLHRLEPGYPLIIGGITIPHDRGCEAHSDGDVLL
        N+ NF  + V  S + PS+        R  S    + AS  AV+++      +PSK L FRVGHGFDLHRLEPGYPLIIGGI IPHDRGCEAHSDGDVLL
Subjt:  NKRNF--TAVSSSSSLPSF--------RLNSAASPSVASTTAVKSD------SPSKTLPFRVGHGFDLHRLEPGYPLIIGGITIPHDRGCEAHSDGDVLL

Query:  HCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMHEAGYDIGNLDATLILQRPKLSPHKEAIRANLSELLGADPSVVNLKAKTHEKVDSLG
        HCVVDAILGALGLPDIGQIFPD+DPKWKGAPSSVFIKEAVRLM EAGY++GNLDATLILQRPK+SPHKEAIR NL +LLGADP VVNLKAKTHEKVDSLG
Subjt:  HCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMHEAGYDIGNLDATLILQRPKLSPHKEAIRANLSELLGADPSVVNLKAKTHEKVDSLG

Query:  ENRSIAAHTVVLLMSR
        ENRSIAAHTVVLLM +
Subjt:  ENRSIAAHTVVLLMSR

Arabidopsis top hitse value%identityAlignment
AT1G63970.1 isoprenoid F7.9e-8987.22Show/hide
Query:  SAASPSVASTTAVKSDSPSKTLPFRVGHGFDLHRLEPGYPLIIGGITIPHDRGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFI
        SAAS +V    +V S+ P+KTLPFR+GHGFDLHRLEPGYPLIIGGI IPHDRGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGA SSVFI
Subjt:  SAASPSVASTTAVKSDSPSKTLPFRVGHGFDLHRLEPGYPLIIGGITIPHDRGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFI

Query:  KEAVRLMHEAGYDIGNLDATLILQRPKLSPHKEAIRANLSELLGADPSVVNLKAKTHEKVDSLGENRSIAAHTVVLLMSR
        KEAVRLM EAGY+IGNLDATLILQRPK+SPHKE IR+NLS+LLGADPSVVNLKAKTHEKVDSLGENRSIAAHTV+LLM +
Subjt:  KEAVRLMHEAGYDIGNLDATLILQRPKLSPHKEAIRANLSELLGADPSVVNLKAKTHEKVDSLGENRSIAAHTVVLLMSR

AT1G63970.2 isoprenoid F2.1e-8182.78Show/hide
Query:  SAASPSVASTTAVKSDSPSKTLPFRVGHGFDLHRLEPGYPLIIGGITIPHDRGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFI
        SAAS +V    +V S+ P+KTLPFR+GHGFDLHRLEPGYPLIIGGI IPHDRGCEAHSD        VDAILGALGLPDIGQIFPDSDPKWKGA SSVFI
Subjt:  SAASPSVASTTAVKSDSPSKTLPFRVGHGFDLHRLEPGYPLIIGGITIPHDRGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFI

Query:  KEAVRLMHEAGYDIGNLDATLILQRPKLSPHKEAIRANLSELLGADPSVVNLKAKTHEKVDSLGENRSIAAHTVVLLMSR
        KEAVRLM EAGY+IGNLDATLILQRPK+SPHKE IR+NLS+LLGADPSVVNLKAKTHEKVDSLGENRSIAAHTV+LLM +
Subjt:  KEAVRLMHEAGYDIGNLDATLILQRPKLSPHKEAIRANLSELLGADPSVVNLKAKTHEKVDSLGENRSIAAHTVVLLMSR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTGCCAAGATTCCAAAATCAGGCAGCGCATCTGTTGGCTCGTGAAGGTTCTCGGGTTTGAGTCTTTTAAAGCCCAATTCTTTTCTATTCGAGTTAACAAAAGAAATTT
CACTGCTGTTTCCTCCTCCTCTTCTCTACCTTCCTTCCGTCTCAATTCCGCCGCTTCTCCCTCTGTGGCGTCCACTACCGCCGTCAAATCCGATTCTCCGTCCAAAACCT
TGCCATTTCGGGTCGGACATGGCTTCGATCTTCATAGGTTGGAACCTGGGTACCCTTTGATTATTGGGGGAATTACCATTCCCCATGATAGAGGCTGCGAAGCTCATTCC
GATGGGGATGTTCTCCTACATTGTGTGGTTGATGCAATTTTGGGTGCTTTGGGGCTTCCTGATATTGGACAGATCTTTCCAGATTCAGATCCCAAATGGAAGGGTGCTCC
ATCGTCCGTTTTCATCAAAGAAGCTGTGAGACTGATGCATGAGGCAGGTTATGACATAGGCAACTTGGATGCCACATTGATACTTCAAAGACCAAAGCTTAGCCCTCACA
AGGAAGCTATCAGAGCAAACCTCTCTGAGCTCCTGGGAGCCGACCCCTCTGTCGTGAATCTGAAGGCGAAAACGCATGAGAAAGTCGACAGCCTTGGCGAAAACAGAAGC
ATTGCTGCTCATACTGTGGTCCTCTTGATGAGCAGATAG
mRNA sequenceShow/hide mRNA sequence
ATGTGCCAAGATTCCAAAATCAGGCAGCGCATCTGTTGGCTCGTGAAGGTTCTCGGGTTTGAGTCTTTTAAAGCCCAATTCTTTTCTATTCGAGTTAACAAAAGAAATTT
CACTGCTGTTTCCTCCTCCTCTTCTCTACCTTCCTTCCGTCTCAATTCCGCCGCTTCTCCCTCTGTGGCGTCCACTACCGCCGTCAAATCCGATTCTCCGTCCAAAACCT
TGCCATTTCGGGTCGGACATGGCTTCGATCTTCATAGGTTGGAACCTGGGTACCCTTTGATTATTGGGGGAATTACCATTCCCCATGATAGAGGCTGCGAAGCTCATTCC
GATGGGGATGTTCTCCTACATTGTGTGGTTGATGCAATTTTGGGTGCTTTGGGGCTTCCTGATATTGGACAGATCTTTCCAGATTCAGATCCCAAATGGAAGGGTGCTCC
ATCGTCCGTTTTCATCAAAGAAGCTGTGAGACTGATGCATGAGGCAGGTTATGACATAGGCAACTTGGATGCCACATTGATACTTCAAAGACCAAAGCTTAGCCCTCACA
AGGAAGCTATCAGAGCAAACCTCTCTGAGCTCCTGGGAGCCGACCCCTCTGTCGTGAATCTGAAGGCGAAAACGCATGAGAAAGTCGACAGCCTTGGCGAAAACAGAAGC
ATTGCTGCTCATACTGTGGTCCTCTTGATGAGCAGATAG
Protein sequenceShow/hide protein sequence
MCQDSKIRQRICWLVKVLGFESFKAQFFSIRVNKRNFTAVSSSSSLPSFRLNSAASPSVASTTAVKSDSPSKTLPFRVGHGFDLHRLEPGYPLIIGGITIPHDRGCEAHS
DGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMHEAGYDIGNLDATLILQRPKLSPHKEAIRANLSELLGADPSVVNLKAKTHEKVDSLGENRS
IAAHTVVLLMSR