; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

HG10002705 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10002705
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationChr11:10246068..10246574
RNA-Seq ExpressionHG10002705
SyntenyHG10002705
Gene Ontology termsNA
InterPro domainsIPR036691 - Endonuclease/exonuclease/phosphatase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF5464386.1 hypothetical protein F2P56_014464 [Juglans regia]3.0e-2343.38Show/hide
Query:  WLLGGDLNECLWPNEKEGGSNRMSRNMELFREVVNDLKLCDLGYGGNIHTWTSKNRKGQCIFKRLDRFLSNSTFCDLFARIQVNHLDWYNSDHRPICIEV
        WLL GD NE L PNEK GG  R  + ++ F EV++D +L DLG+ GN  TW +K    QCI +RLDR L+N  +  LF    V+H     SDH PI +++
Subjt:  WLLGGDLNECLWPNEKEGGSNRMSRNMELFREVVNDLKLCDLGYGGNIHTWTSKNRKGQCIFKRLDRFLSNSTFCDLFARIQVNHLDWYNSDHRPICIEV

Query:  HVRNGNRSLDRKSSLFRFEEFWLNEPLCKETVQQGW
         V   NR   +   LFRFE  W+ E  CK  +++ W
Subjt:  HVRNGNRSLDRKSSLFRFEEFWLNEPLCKETVQQGW

XP_010670096.1 PREDICTED: uncharacterized protein LOC104887198 [Beta vulgaris subsp. vulgaris]4.6e-2440.24Show/hide
Query:  PWLLGGDLNECLWPNEKEGGSNRMSRNMELFREVVNDLKLCDLGYGGNIHTWTSKNRKGQCIFKRLDRFLSNSTFCDLFARIQVNHLDWYNSDHRPICIE
        P ++ GD NE L   EKEGG+ R    M+ FR  V+D  LCDLGY G   TW   N     + +RLDRFL++  +CD+F ++ V H+  Y SDH PI + 
Subjt:  PWLLGGDLNECLWPNEKEGGSNRMSRNMELFREVVNDLKLCDLGYGGNIHTWTSKNRKGQCIFKRLDRFLSNSTFCDLFARIQVNHLDWYNSDHRPICIE

Query:  V---HVRNGNRSLDRKSSLFRFEEFWLNEPLCKETVQQGWDNNVEVRGSNVSVVRILNNSLYRCSSKLT
            H R  N+       LFRFE  WL++P C   V+Q W N     G NV V R+ N     C+ +L+
Subjt:  V---HVRNGNRSLDRKSSLFRFEEFWLNEPLCKETVQQGWDNNVEVRGSNVSVVRILNNSLYRCSSKLT

XP_021722855.1 uncharacterized protein LOC110690338 [Chenopodium quinoa]3.0e-2339.19Show/hide
Query:  NSPWLLGGDLNECLWPNEKEGGSNRMSRNMELFREVVNDLKLCDLGYGGNIHTWTSKNRKGQCIFKRLDRFLSNSTFCDLFARIQVNHLDWYNSDHRPIC
        N P+++ GD NE +  NEKEGG  R    M  FR  ++D +LCDLGY G+I TW         + +RLD+FL ++ +C LF   +V H   Y+SDH PI 
Subjt:  NSPWLLGGDLNECLWPNEKEGGSNRMSRNMELFREVVNDLKLCDLGYGGNIHTWTSKNRKGQCIFKRLDRFLSNSTFCDLFARIQVNHLDWYNSDHRPIC

Query:  IEV--HVRNGNRSLDRKSSLFRFEEFWLNEPLCKETVQQGWDNNVEVR
        +    H  +G     R+S  F+FE  WL+   C + V++ W NN   R
Subjt:  IEV--HVRNGNRSLDRKSSLFRFEEFWLNEPLCKETVQQGWDNNVEVR

XP_024195790.1 uncharacterized protein LOC112198938 [Rosa chinensis]3.9e-2344.29Show/hide
Query:  NSPWLLGGDLNECLWPNEKEGGSNRMSRNMELFREVVNDLKLCDLGYGGNIHTWTSKNRKGQCIFKRLDRFLSNSTFCDLFARIQVNHLDWYNSDHRPIC
        N PWLLGGD NE L   EKEGG  R  R M+ FRE +    L DL + G   TW   NR G+ I  RLDRF++N ++  +F   +V HL+   SDH PI 
Subjt:  NSPWLLGGDLNECLWPNEKEGGSNRMSRNMELFREVVNDLKLCDLGYGGNIHTWTSKNRKGQCIFKRLDRFLSNSTFCDLFARIQVNHLDWYNSDHRPIC

Query:  IEVHVRNGNRSLDRKSSLFRFEEFWLNEPLCKETVQQGWD
        ++V  +   R   +K   FRFE+FWL E  C++ V+ GW+
Subjt:  IEVHVRNGNRSLDRKSSLFRFEEFWLNEPLCKETVQQGWD

XP_042980077.1 uncharacterized protein LOC122310261 [Carya illinoinensis]1.0e-2340Show/hide
Query:  PWLLGGDLNECLWPNEKEGGSNRMSRNMELFREVVNDLKLCDLGYGGNIHTWTSKNRKGQCIFKRLDRFLSNSTFCDLFARIQVNHLDWYNSDHRPICIE
        PWL+GGDLNE L P+EK GG +R    +E FREV+ + +L DLGY G   TW +       IF+RLDRF+ N     LF  + V H +  +SDH PI  E
Subjt:  PWLLGGDLNECLWPNEKEGGSNRMSRNMELFREVVNDLKLCDLGYGGNIHTWTSKNRKGQCIFKRLDRFLSNSTFCDLFARIQVNHLDWYNSDHRPICIE

Query:  VHVRNGNRSLDRKSSLFRFEEFWLNEPLCKETVQQGWDNNVEVRGSNVSVVRILN
            +  + + R+   FRFE  W+ E  C+  ++Q W      RG N  +  +LN
Subjt:  VHVRNGNRSLDRKSSLFRFEEFWLNEPLCKETVQQGWDNNVEVRGSNVSVVRILN

TrEMBL top hitse value%identityAlignment
A0A7J6GGL8 CCHC-type domain-containing protein9.4e-2340.15Show/hide
Query:  PWLLGGDLNECLWPNEKEGGSNRMSRNMELFREVVNDLKLCDLGYGGNIHTWTSKNRKGQCIFKRLDRFLSNSTFCDLFARIQVNHLDWYNSDHRPICIE
        PW+ GGD NE L  NEK+GGS+R    M  F+  ++   L DLG+ G   TW +K + G  + +RLDR+  N  + DLF  ++V + D+ NSDHRPI   
Subjt:  PWLLGGDLNECLWPNEKEGGSNRMSRNMELFREVVNDLKLCDLGYGGNIHTWTSKNRKGQCIFKRLDRFLSNSTFCDLFARIQVNHLDWYNSDHRPICIE

Query:  VHVRNGNRSLDRKSSLFRFEEFWLNEPLCKETVQQGW
        +   +  +  D+K   FRFE  WL +P C+E + + W
Subjt:  VHVRNGNRSLDRKSSLFRFEEFWLNEPLCKETVQQGW

A0A7J6GL46 CCHC-type domain-containing protein9.4e-2340.15Show/hide
Query:  PWLLGGDLNECLWPNEKEGGSNRMSRNMELFREVVNDLKLCDLGYGGNIHTWTSKNRKGQCIFKRLDRFLSNSTFCDLFARIQVNHLDWYNSDHRPICIE
        PW+ GGD NE L  NEK+GGS+R    M  F+  ++   L DLG+ G   TW +K + G  + +RLDR+  N  + DLF  ++V + D+ NSDHRPI   
Subjt:  PWLLGGDLNECLWPNEKEGGSNRMSRNMELFREVVNDLKLCDLGYGGNIHTWTSKNRKGQCIFKRLDRFLSNSTFCDLFARIQVNHLDWYNSDHRPICIE

Query:  VHVRNGNRSLDRKSSLFRFEEFWLNEPLCKETVQQGW
        +   +  +  D+K   FRFE  WL +P C+E + + W
Subjt:  VHVRNGNRSLDRKSSLFRFEEFWLNEPLCKETVQQGW

A0A803LWV5 Uncharacterized protein5.5e-2341.42Show/hide
Query:  NSPWLLGGDLNECLWPNEKEGGSNRMSRNMELFREVVNDLKLCDLGYGGNIHTWTSKNRKGQCIFKRLDRFLSNSTFCDLFARIQVNHLDWYNSDHRPIC
        +SP L+ GD NE +  NEKEGG+ R  R  + FRE ++   L DLGY G   TW   N     I +RLDRFL+   +C+L    +V HL + NSDH PI 
Subjt:  NSPWLLGGDLNECLWPNEKEGGSNRMSRNMELFREVVNDLKLCDLGYGGNIHTWTSKNRKGQCIFKRLDRFLSNSTFCDLFARIQVNHLDWYNSDHRPIC

Query:  IEVHVRNGNR-SLDRKSSLFRFEEFWLNEPLCKETVQQGWDNNVEVRGSNVSVVRILNNSLYRCSSKLT
        +E     GN     +K  LFRFE  WL+   C E V   W   V V       +RILN     CS  LT
Subjt:  IEVHVRNGNR-SLDRKSSLFRFEEFWLNEPLCKETVQQGWDNNVEVRGSNVSVVRILNNSLYRCSSKLT

F4NCI7 Reverse transcriptase domain-containing protein9.4e-2342.14Show/hide
Query:  PWLLGGDLNECLWPNEKEGGSNRMSRNMELFREVVNDLKLCDLGYGGNIHTWTSKNRKGQCIFKRLDRFLSNSTFCDLFARIQVNHLDWYNSDHRPICIE
        P L  GD NE     EKEGG+ R  R M+ FREV++D  + DLGY GN  TW   N     I +RLDR L+N  +CD F   +V HL  Y SDH P+ ++
Subjt:  PWLLGGDLNECLWPNEKEGGSNRMSRNMELFREVVNDLKLCDLGYGGNIHTWTSKNRKGQCIFKRLDRFLSNSTFCDLFARIQVNHLDWYNSDHRPICIE

Query:  VHVRNGNRSLDRKSSLFRFEEFWLNEPLCKETVQQGWDNN
          V   N S  R + LF+FE  WL++  C + V++ W+ +
Subjt:  VHVRNGNRSLDRKSSLFRFEEFWLNEPLCKETVQQGWDNN

F4NCJ0 Reverse transcriptase domain-containing protein4.2e-2341.43Show/hide
Query:  PWLLGGDLNECLWPNEKEGGSNRMSRNMELFREVVNDLKLCDLGYGGNIHTWTSKNRKGQCIFKRLDRFLSNSTFCDLFARIQVNHLDWYNSDHRPICIE
        P L+GGD NE +   EKEGG++R+ R M  FRE ++DL L DLGY G  HTW   N    CI +RLDRF+ + ++  ++    V+H   Y SDH  IC+ 
Subjt:  PWLLGGDLNECLWPNEKEGGSNRMSRNMELFREVVNDLKLCDLGYGGNIHTWTSKNRKGQCIFKRLDRFLSNSTFCDLFARIQVNHLDWYNSDHRPICIE

Query:  VHVRNGNRSLDRKSSLFRFEEFWLNEPLCKETVQQGWDNN
            N  R    K   F FE  WL +P C+ET++  W ++
Subjt:  VHVRNGNRSLDRKSSLFRFEEFWLNEPLCKETVQQGWDNN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
AATTCTCCTTGGCTCTTGGGAGGAGATTTGAATGAATGTCTTTGGCCTAATGAAAAAGAAGGTGGGTCCAACCGAATGTCGAGAAATATGGAACTGTTTCGTGAGGTGGT
TAATGATCTAAAGTTGTGTGATCTAGGATACGGAGGCAATATTCATACGTGGACAAGTAAAAATAGAAAAGGGCAGTGCATTTTCAAGCGCTTGGATCGGTTTCTGAGTA
ATTCCACTTTTTGTGATTTGTTCGCCCGAATTCAAGTTAATCATCTGGATTGGTATAACTCTGATCATAGGCCAATATGCATTGAGGTGCACGTTAGAAATGGGAACAGA
AGTTTAGACAGGAAATCAAGTTTGTTTCGGTTTGAAGAATTTTGGTTGAATGAACCTCTTTGCAAAGAAACTGTGCAGCAAGGTTGGGACAATAATGTGGAAGTTAGGGG
AAGTAATGTTAGTGTTGTGAGAATTTTAAATAATAGTCTTTATAGATGCTCTTCAAAGCTGACGTAG
mRNA sequenceShow/hide mRNA sequence
AATTCTCCTTGGCTCTTGGGAGGAGATTTGAATGAATGTCTTTGGCCTAATGAAAAAGAAGGTGGGTCCAACCGAATGTCGAGAAATATGGAACTGTTTCGTGAGGTGGT
TAATGATCTAAAGTTGTGTGATCTAGGATACGGAGGCAATATTCATACGTGGACAAGTAAAAATAGAAAAGGGCAGTGCATTTTCAAGCGCTTGGATCGGTTTCTGAGTA
ATTCCACTTTTTGTGATTTGTTCGCCCGAATTCAAGTTAATCATCTGGATTGGTATAACTCTGATCATAGGCCAATATGCATTGAGGTGCACGTTAGAAATGGGAACAGA
AGTTTAGACAGGAAATCAAGTTTGTTTCGGTTTGAAGAATTTTGGTTGAATGAACCTCTTTGCAAAGAAACTGTGCAGCAAGGTTGGGACAATAATGTGGAAGTTAGGGG
AAGTAATGTTAGTGTTGTGAGAATTTTAAATAATAGTCTTTATAGATGCTCTTCAAAGCTGACGTAG
Protein sequenceShow/hide protein sequence
NSPWLLGGDLNECLWPNEKEGGSNRMSRNMELFREVVNDLKLCDLGYGGNIHTWTSKNRKGQCIFKRLDRFLSNSTFCDLFARIQVNHLDWYNSDHRPICIEVHVRNGNR
SLDRKSSLFRFEEFWLNEPLCKETVQQGWDNNVEVRGSNVSVVRILNNSLYRCSSKLT