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HG10002717 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10002717
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionLipid transfer protein
Genome locationChr11:10592683..10592997
RNA-Seq ExpressionHG10002717
SyntenyHG10002717
Gene Ontology termsGO:0006869 - lipid transport (biological process)
InterPro domainsIPR016140 - Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain
IPR033872 - Non-specific lipid-transfer protein type 2
IPR036312 - Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8648021.1 hypothetical protein Csa_005848 [Cucumis sativus]3.3e-2866.99Show/hide
Query:  MKNFPIT-VVCIFVVATTVALFNCARPVAAQTTCNPSQLGIPCGAAFFSSSTPSRDCCNKLREQQPCYCTYLHDPNLKNLVDSPAAKRIAKACNITFPSQ
        MKNFPIT VVCIFVVATTVAL N A PV AQ  C+PSQL   C AAFF   TPS+ CCNKLRE QPCYC Y++DP+L++ V+S AA+RIAK+CNI+ P++
Subjt:  MKNFPIT-VVCIFVVATTVALFNCARPVAAQTTCNPSQLGIPCGAAFFSSSTPSRDCCNKLREQQPCYCTYLHDPNLKNLVDSPAAKRIAKACNITFPSQ

Query:  AEC
        A+C
Subjt:  AEC

KAE8649342.1 hypothetical protein Csa_014385 [Cucumis sativus]6.1e-2766.34Show/hide
Query:  NFPIT-VVCIFVVATTVALFNCARPVAAQTTCNPSQLGIPCGAAFFSSSTPSRDCCNKLREQQPCYCTYLHDPNLKNLVDSPAAKRIAKACNITFPSQAE
        NFPIT VVCIFVVATTVAL N A PV AQ  C+PSQL   C AAFF   TPS+ CCNKLRE QPCYC Y++DP+L++ V+S AA+RIAK+CNI+ P++A+
Subjt:  NFPIT-VVCIFVVATTVALFNCARPVAAQTTCNPSQLGIPCGAAFFSSSTPSRDCCNKLREQQPCYCTYLHDPNLKNLVDSPAAKRIAKACNITFPSQAE

Query:  C
        C
Subjt:  C

KAG6581747.1 hypothetical protein SDJN03_21749, partial [Cucurbita argyrosperma subsp. sororia]2.3e-2664.08Show/hide
Query:  MKNFPITVVCIFVVATTVALFNCARPVAAQTTCNPSQLGIPCGAAFFSSSTPSRDCCNKLREQQPCYCTYLHDPNLKNLVDSPAAKRIAKACNITFPSQA
        MK F ITVVC FV    VA    A  V AQ TC+P  L IPCG A FS   PS  CCNKLREQQPCYC YL++P+LK  VDSPAA+RIA+ CNIT P+QA
Subjt:  MKNFPITVVCIFVVATTVALFNCARPVAAQTTCNPSQLGIPCGAAFFSSSTPSRDCCNKLREQQPCYCTYLHDPNLKNLVDSPAAKRIAKACNITFPSQA

Query:  ECP
        ECP
Subjt:  ECP

KAG7026200.1 hypothetical protein SDJN02_12699, partial [Cucurbita argyrosperma subsp. argyrosperma]5.2e-2663.11Show/hide
Query:  MKNFPITVVCIFVVATTVALFNCARPVAAQTTCNPSQLGIPCGAAFFSSSTPSRDCCNKLREQQPCYCTYLHDPNLKNLVDSPAAKRIAKACNITFPSQA
        MK F ITVVC F+    VA    A  V AQ TC+P  L IPCG A FS   PS  CCNKLREQQPCYC YL++P+LK  VDSPAA+RIA+ CNIT P+QA
Subjt:  MKNFPITVVCIFVVATTVALFNCARPVAAQTTCNPSQLGIPCGAAFFSSSTPSRDCCNKLREQQPCYCTYLHDPNLKNLVDSPAAKRIAKACNITFPSQA

Query:  ECP
        ECP
Subjt:  ECP

XP_008444079.1 PREDICTED: non-specific lipid-transfer protein 2P-like [Cucumis melo]5.0e-2964.76Show/hide
Query:  MKNFPIT-VVCIFVVATTVALFNCARPVAAQTTCNPSQLGIPCGAAFFSSSTPSRDCCNKLREQQPCYCTYLHDPNLKNLVDSPAAKRIAKACNITFPSQ
        MKNFPIT VVCIFVVATTVAL N   PVAAQT C+ SQL   C  AF     P+++CC KLR +QPCYC Y  DPNL+N V+S AA+R+A+ACNITFP+ 
Subjt:  MKNFPIT-VVCIFVVATTVALFNCARPVAAQTTCNPSQLGIPCGAAFFSSSTPSRDCCNKLREQQPCYCTYLHDPNLKNLVDSPAAKRIAKACNITFPSQ

Query:  AECPN
        A+CPN
Subjt:  AECPN

TrEMBL top hitse value%identityAlignment
A0A0A0KZL4 Putative lipid transfer protein family protein1.6e-2866.99Show/hide
Query:  MKNFPIT-VVCIFVVATTVALFNCARPVAAQTTCNPSQLGIPCGAAFFSSSTPSRDCCNKLREQQPCYCTYLHDPNLKNLVDSPAAKRIAKACNITFPSQ
        MKNFPIT VVCIFVVATTVAL N A PV AQ  C+PSQL   C AAFF   TPS+ CCNKLRE QPCYC Y++DP+L++ V+S AA+RIAK+CNI+ P++
Subjt:  MKNFPIT-VVCIFVVATTVALFNCARPVAAQTTCNPSQLGIPCGAAFFSSSTPSRDCCNKLREQQPCYCTYLHDPNLKNLVDSPAAKRIAKACNITFPSQ

Query:  AEC
        A+C
Subjt:  AEC

A0A1S3BAC3 non-specific lipid-transfer protein 2P-like2.4e-2964.76Show/hide
Query:  MKNFPIT-VVCIFVVATTVALFNCARPVAAQTTCNPSQLGIPCGAAFFSSSTPSRDCCNKLREQQPCYCTYLHDPNLKNLVDSPAAKRIAKACNITFPSQ
        MKNFPIT VVCIFVVATTVAL N   PVAAQT C+ SQL   C  AF     P+++CC KLR +QPCYC Y  DPNL+N V+S AA+R+A+ACNITFP+ 
Subjt:  MKNFPIT-VVCIFVVATTVALFNCARPVAAQTTCNPSQLGIPCGAAFFSSSTPSRDCCNKLREQQPCYCTYLHDPNLKNLVDSPAAKRIAKACNITFPSQ

Query:  AECPN
        A+CPN
Subjt:  AECPN

A0A5A7V7R4 Non-specific lipid-transfer protein 2P-like2.4e-2964.76Show/hide
Query:  MKNFPIT-VVCIFVVATTVALFNCARPVAAQTTCNPSQLGIPCGAAFFSSSTPSRDCCNKLREQQPCYCTYLHDPNLKNLVDSPAAKRIAKACNITFPSQ
        MKNFPIT VVCIFVVATTVAL N   PVAAQT C+ SQL   C  AF     P+++CC KLR +QPCYC Y  DPNL+N V+S AA+R+A+ACNITFP+ 
Subjt:  MKNFPIT-VVCIFVVATTVALFNCARPVAAQTTCNPSQLGIPCGAAFFSSSTPSRDCCNKLREQQPCYCTYLHDPNLKNLVDSPAAKRIAKACNITFPSQ

Query:  AECPN
        A+CPN
Subjt:  AECPN

A0A6J1GTR0 non-specific lipid-transfer protein 2-like1.2e-1550Show/hide
Query:  MKNFPITVVCIFVVATTVALFNCARPVAAQTTCNPSQLGIPCGAAFFSSSTPSRDCCNKLREQQPCYCTYLHDPNLKNLVDSPAAKRIAKACNITFPS
        MK FPIT+  +F +A  VAL + AR VA    C+P +L   C  A  SSSTPS  CCNKLREQ+PC C Y+ +P L+  V SP A+++A  C + FPS
Subjt:  MKNFPITVVCIFVVATTVALFNCARPVAAQTTCNPSQLGIPCGAAFFSSSTPSRDCCNKLREQQPCYCTYLHDPNLKNLVDSPAAKRIAKACNITFPS

A0A7J8TH09 AAI domain-containing protein4.4e-1547.83Show/hide
Query:  ITVVCIFVVATTVALFNCARPVAAQTTCNPSQLGIPCGAAFFSSSTPSRDCCNKLREQQPCYCTYLHDPNLKNLVDSPAAKRIAKACNITFP
        ++ V + VVA  V LF+     A   TCNP++L  PC  A  SSS PSRDCC+KL+ QQPC C Y+ +P+LK  V+SP AK++A  C + +P
Subjt:  ITVVCIFVVATTVALFNCARPVAAQTTCNPSQLGIPCGAAFFSSSTPSRDCCNKLREQQPCYCTYLHDPNLKNLVDSPAAKRIAKACNITFP

SwissProt top hitse value%identityAlignment
P20145 Probable non-specific lipid-transfer protein1.3e-0834.48Show/hide
Query:  IFVVATTVALFNCARPVAAQTTCNPSQLGIPCGAAFFSSSTPSRDCCNKLREQQPCYCTYLHDPNLKNLVDSPAAKRIAKACNITFP
        + V+   V          A   C P+QL + C +A    + PS +CC  LR QQ C C Y+ DPN  + V SP A+     C I  P
Subjt:  IFVVATTVALFNCARPVAAQTTCNPSQLGIPCGAAFFSSSTPSRDCCNKLREQQPCYCTYLHDPNLKNLVDSPAAKRIAKACNITFP

P82353 Non-specific lipid-transfer protein 25.4e-1043.94Show/hide
Query:  TCNPSQLGIPCGAAFFSSSTPSRDCCNKLREQQPCYCTYLHDPNLKNLVDSPAAKRIAKACNITFP
        TC+P QL  PC     S +     CC KLREQ+PC C YL +P+L+  V+SP A+++A  C +  P
Subjt:  TCNPSQLGIPCGAAFFSSSTPSRDCCNKLREQQPCYCTYLHDPNLKNLVDSPAAKRIAKACNITFP

P82901 Non-specific lipid-transfer protein 2P4.6e-0940Show/hide
Query:  CNPSQLGIPCGAAFFSSSTPSRDCCNKLREQQPCYCTYLHDPNLKNLVDSPAAKRIAKACNITFP
        C  SQL + C +A  S + PS +CC  LR QQPC+C Y  DP     + SP A+   ++C +  P
Subjt:  CNPSQLGIPCGAAFFSSSTPSRDCCNKLREQQPCYCTYLHDPNLKNLVDSPAAKRIAKACNITFP

P86809 Non-specific lipid-transfer protein 22.4e-1353.97Show/hide
Query:  TCNPSQLGIPCGAAFFSSSTPSRDCCNKLREQQPCYCTYLHDPNLKNLVDSPAAKRIAKACNI
        TC+  QL  PC AA   ++ PS  CCNKL+EQ+PC C YL DPNLKN V+SP A++ A +C +
Subjt:  TCNPSQLGIPCGAAFFSSSTPSRDCCNKLREQQPCYCTYLHDPNLKNLVDSPAAKRIAKACNI

Q43681 Probable non-specific lipid-transfer protein AKCS94.7e-1444.68Show/hide
Query:  ITVVCIFVVATTVALFNC-ARPVAAQTTCNPSQLGIPCGAAFFSSSTPSRDCCNKLREQQPCYCTYLHDPNLKNLVDSPAAKRIAKACNITFPS
        ++VVC  VV   VALF     PVA   TCNP++L   C  A    S PS  CC+KL+ Q+PC C Y+ +P+LK  V+SP AK++   C +T+P+
Subjt:  ITVVCIFVVATTVALFNC-ARPVAAQTTCNPSQLGIPCGAAFFSSSTPSRDCCNKLREQQPCYCTYLHDPNLKNLVDSPAAKRIAKACNITFPS

Arabidopsis top hitse value%identityAlignment
AT1G48750.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein1.8e-1645.16Show/hide
Query:  ITVVCIFVVATTVALFNCARPVAAQTTCNPSQLGIPCGAAFFSSSTPSRDCCNKLREQQPCYCTYLHDPNLKNLVDSPAAKRIAKACNITFPS
        + V+ + V+A   A+     PVA   TC+P QL   C AA  SSS PS  CC KLREQQPC C Y+ +P L+  V SP A++++ +C I  PS
Subjt:  ITVVCIFVVATTVALFNCARPVAAQTTCNPSQLGIPCGAAFFSSSTPSRDCCNKLREQQPCYCTYLHDPNLKNLVDSPAAKRIAKACNITFPS

AT1G73780.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein1.2e-1241.94Show/hide
Query:  PITVVCIFVVATTVALFNCARPVAAQTTCNPSQLGIPCGAAFFSSSTPSRDCCNKLREQQPCYCTYLHDPNLKNLVDSPAAKRIAKACNITFP
        P+   C  ++   VA  N    VAA   CNP+QL  PC       S PS  CC+K++EQQ C C YL +PN K+ ++SP AK IA  C+  +P
Subjt:  PITVVCIFVVATTVALFNCARPVAAQTTCNPSQLGIPCGAAFFSSSTPSRDCCNKLREQQPCYCTYLHDPNLKNLVDSPAAKRIAKACNITFP

AT3G18280.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein5.7e-1540.66Show/hide
Query:  TVVCIFVVATTVALFNCARPVAAQTTCNPSQLGIPCGAAFFSSSTPSRDCCNKLREQQPCYCTYLHDPNLKNLVDSPAAKRIAKACNITFP
        T+V +F +A  + +     P A   TC+P QL  PC  A  SSS PS  CC KL+EQ+PC C Y+ +P+L+  V +P A++++K+C +  P
Subjt:  TVVCIFVVATTVALFNCARPVAAQTTCNPSQLGIPCGAAFFSSSTPSRDCCNKLREQQPCYCTYLHDPNLKNLVDSPAAKRIAKACNITFP

AT5G38170.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein2.3e-1140Show/hide
Query:  AQTTCNPSQLGIPCGAAFFSSSTPSRDCCNKLREQQPCYCTYLHDPNLKNLVDSPAAKRIAKACNITFPS
        A  TC+  QL   C     +   PS +CC KL+EQQPC+CTY+ DP     V S  AK+    C + +P+
Subjt:  AQTTCNPSQLGIPCGAAFFSSSTPSRDCCNKLREQQPCYCTYLHDPNLKNLVDSPAAKRIAKACNITFPS

AT5G38195.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein2.9e-1135.71Show/hide
Query:  MKNFPITVVCIFVVATTVALFNCARPVAAQTTCNPSQLGIPCGAAFFSSSTPSRDCCNKLREQQPCYCTYLHDPNLKNLVDSPAAKRIAKACNITFPS
        MK   ITVV I V+++ + + +        ++C P++L +PC  A  +   P++DCC+KL EQ+ C C Y+++P     V SP A+++ + CNI +PS
Subjt:  MKNFPITVVCIFVVATTVALFNCARPVAAQTTCNPSQLGIPCGAAFFSSSTPSRDCCNKLREQQPCYCTYLHDPNLKNLVDSPAAKRIAKACNITFPS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGAATTTTCCTATCACAGTTGTTTGCATTTTTGTGGTGGCGACCACGGTGGCGCTTTTCAACTGCGCTCGTCCGGTGGCTGCTCAGACAACATGCAACCCTTCGCA
GCTAGGTATACCATGTGGAGCAGCATTTTTCTCATCGTCGACGCCCAGTCGCGATTGTTGCAATAAGTTGAGGGAGCAACAACCATGCTACTGTACTTATCTCCACGATC
CAAATTTGAAGAATTTGGTGGATTCTCCTGCCGCTAAAAGGATTGCTAAAGCCTGCAATATTACCTTCCCAAGTCAGGCTGAGTGCCCTAACTAG
mRNA sequenceShow/hide mRNA sequence
ATGAAGAATTTTCCTATCACAGTTGTTTGCATTTTTGTGGTGGCGACCACGGTGGCGCTTTTCAACTGCGCTCGTCCGGTGGCTGCTCAGACAACATGCAACCCTTCGCA
GCTAGGTATACCATGTGGAGCAGCATTTTTCTCATCGTCGACGCCCAGTCGCGATTGTTGCAATAAGTTGAGGGAGCAACAACCATGCTACTGTACTTATCTCCACGATC
CAAATTTGAAGAATTTGGTGGATTCTCCTGCCGCTAAAAGGATTGCTAAAGCCTGCAATATTACCTTCCCAAGTCAGGCTGAGTGCCCTAACTAG
Protein sequenceShow/hide protein sequence
MKNFPITVVCIFVVATTVALFNCARPVAAQTTCNPSQLGIPCGAAFFSSSTPSRDCCNKLREQQPCYCTYLHDPNLKNLVDSPAAKRIAKACNITFPSQAECPN