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HG10002718 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10002718
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionLipid transfer protein
Genome locationChr11:10626506..10626808
RNA-Seq ExpressionHG10002718
SyntenyHG10002718
Gene Ontology termsGO:0006869 - lipid transport (biological process)
InterPro domainsIPR016140 - Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain
IPR033872 - Non-specific lipid-transfer protein type 2
IPR036312 - Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0064159.1 non-specific lipid-transfer protein 2-like [Cucumis melo var. makuwa]1.0e-3480.39Show/hide
Query:  MKKVSISS-LCLSVTVMAMVM-VALITGARPADAVNCNPTEMKACLPAFESSAPPTAECCEKVKEQEPCFCAYLKSPALKPYLESPNAKKISSSCGVAFP
        MKKVSISS LCLS ++MA VM VALITGAR ADAVNCNPTEM+ CLPA ESS PPTAECCEK+KEQEPCFC YLKSP  K YLESPNAKKI+SSCG+  P
Subjt:  MKKVSISS-LCLSVTVMAMVM-VALITGARPADAVNCNPTEMKACLPAFESSAPPTAECCEKVKEQEPCFCAYLKSPALKPYLESPNAKKISSSCGVAFP

Query:  TC
        TC
Subjt:  TC

KAB2611859.1 non-specific lipid-transfer protein 2-like [Pyrus ussuriensis x Pyrus communis]4.4e-2253.61Show/hide
Query:  VSISSLCLSVTVMAMVMVALITGARPADAVNCNPTEMKACLPAFESSAPPTAECCEKVKEQEPCFCAYLKSPALKPYLESPNAKKISSSCGVAFPTC
        + +SS  L+  +M  ++VAL   AR  +AV C+P E+  CL A  S APP+A CCEK+KEQ+PCFC Y+K+P LKPY+++PNAKK++S+CGV FP C
Subjt:  VSISSLCLSVTVMAMVMVALITGARPADAVNCNPTEMKACLPAFESSAPPTAECCEKVKEQEPCFCAYLKSPALKPYLESPNAKKISSSCGVAFPTC

KAG6581740.1 hypothetical protein SDJN03_21742, partial [Cucurbita argyrosperma subsp. sororia]3.5e-2771.74Show/hide
Query:  LCLSVTVMAMVMVALITGARPADAVNCNPTEMKACLPAFESSAPPTAECCEKVKEQEPCFCAYLKSPALKPYLESPNAKKISSSCGVAFPTC
        LCL V V  M MVAL+TG   A+AV C+P EM+ACLPA +SS PPTAECC+KVK+QE C C YLKSP LKPYLESPNAKKI+SSCGV  PTC
Subjt:  LCLSVTVMAMVMVALITGARPADAVNCNPTEMKACLPAFESSAPPTAECCEKVKEQEPCFCAYLKSPALKPYLESPNAKKISSSCGVAFPTC

KGN53815.1 hypothetical protein Csa_014873 [Cucumis sativus]4.5e-3582.35Show/hide
Query:  MKKVSIS-SLCLSVTVMAMVM-VALITGARPADAVNCNPTEMKACLPAFESSAPPTAECCEKVKEQEPCFCAYLKSPALKPYLESPNAKKISSSCGVAFP
        MKKVSIS SLCLSV VMAMVM VALITGA  ADAVNCNP EM+ CLPA ESS PPTAECCEK+KEQEPCFCAYLKSP  KPYLESPNAKKI++SC V  P
Subjt:  MKKVSIS-SLCLSVTVMAMVM-VALITGARPADAVNCNPTEMKACLPAFESSAPPTAECCEKVKEQEPCFCAYLKSPALKPYLESPNAKKISSSCGVAFP

Query:  TC
        TC
Subjt:  TC

XP_023527041.1 non-specific lipid-transfer protein 2-like [Cucurbita pepo subsp. pepo]3.1e-2871.11Show/hide
Query:  LSVTVMAMVMVALITGARPADAVNCNPTEMKACLPAFESSAPPTAECCEKVKEQEPCFCAYLKSPALKPYLESPNAKKISSSCGVAFPTC
        L + V  M MVAL+TGA  A+AVNC+PTEM+ACLPA +S+ PPTAECC+KVK+QE C C YLKSP LKPYLESPNAKKI+SSCG+  PTC
Subjt:  LSVTVMAMVMVALITGARPADAVNCNPTEMKACLPAFESSAPPTAECCEKVKEQEPCFCAYLKSPALKPYLESPNAKKISSSCGVAFPTC

TrEMBL top hitse value%identityAlignment
A0A0A0KW09 AAI domain-containing protein2.2e-3582.35Show/hide
Query:  MKKVSIS-SLCLSVTVMAMVM-VALITGARPADAVNCNPTEMKACLPAFESSAPPTAECCEKVKEQEPCFCAYLKSPALKPYLESPNAKKISSSCGVAFP
        MKKVSIS SLCLSV VMAMVM VALITGA  ADAVNCNP EM+ CLPA ESS PPTAECCEK+KEQEPCFCAYLKSP  KPYLESPNAKKI++SC V  P
Subjt:  MKKVSIS-SLCLSVTVMAMVM-VALITGARPADAVNCNPTEMKACLPAFESSAPPTAECCEKVKEQEPCFCAYLKSPALKPYLESPNAKKISSSCGVAFP

Query:  TC
        TC
Subjt:  TC

A0A5A7VF50 Non-specific lipid-transfer protein 2-like4.9e-3580.39Show/hide
Query:  MKKVSISS-LCLSVTVMAMVM-VALITGARPADAVNCNPTEMKACLPAFESSAPPTAECCEKVKEQEPCFCAYLKSPALKPYLESPNAKKISSSCGVAFP
        MKKVSISS LCLS ++MA VM VALITGAR ADAVNCNPTEM+ CLPA ESS PPTAECCEK+KEQEPCFC YLKSP  K YLESPNAKKI+SSCG+  P
Subjt:  MKKVSISS-LCLSVTVMAMVM-VALITGARPADAVNCNPTEMKACLPAFESSAPPTAECCEKVKEQEPCFCAYLKSPALKPYLESPNAKKISSSCGVAFP

Query:  TC
        TC
Subjt:  TC

A0A5N5G8U2 Non-specific lipid-transfer protein 2-like2.1e-2253.61Show/hide
Query:  VSISSLCLSVTVMAMVMVALITGARPADAVNCNPTEMKACLPAFESSAPPTAECCEKVKEQEPCFCAYLKSPALKPYLESPNAKKISSSCGVAFPTC
        + +SS  L+  +M  ++VAL   AR  +AV C+P E+  CL A  S APP+A CCEK+KEQ+PCFC Y+K+P LKPY+++PNAKK++S+CGV FP C
Subjt:  VSISSLCLSVTVMAMVMVALITGARPADAVNCNPTEMKACLPAFESSAPPTAECCEKVKEQEPCFCAYLKSPALKPYLESPNAKKISSSCGVAFPTC

A0A6A2X1V6 Non-specific lipid-transfer protein 21.1e-2154Show/hide
Query:  MKKVSISSLCLSVTVMAMVMVALITGARPADAVNCNPTEMKACLPAFESSAPPTAECCEKVKEQEPCFCAYLKSPALKPYLESPNAKKISSSCGVAFPTC
        MK VS  +LC    V+A+ +V L      A+AV C+P ++ AC+PAF S A PTA CC K+K+Q+PCFC Y+K+PALK Y+ SPNAKK++S+CGV FP C
Subjt:  MKKVSISSLCLSVTVMAMVMVALITGARPADAVNCNPTEMKACLPAFESSAPPTAECCEKVKEQEPCFCAYLKSPALKPYLESPNAKKISSSCGVAFPTC

A0A6J1D4R3 non-specific lipid-transfer protein 2-like2.8e-2254Show/hide
Query:  MKKVSISSLCLSVTVMAMVMVALITGARPADAVNCNPTEMKACLPAFESSAPPTAECCEKVKEQEPCFCAYLKSPALKPYLESPNAKKISSSCGVAFPTC
        MKK+SI+ L L + V+A  + AL+ GAR  +AV C+PTE+  C+ A  S  PP++ CC K++EQ+PC C YL++P LKPY++SPNAKK++S+CGVAFP+C
Subjt:  MKKVSISSLCLSVTVMAMVMVALITGARPADAVNCNPTEMKACLPAFESSAPPTAECCEKVKEQEPCFCAYLKSPALKPYLESPNAKKISSSCGVAFPTC

SwissProt top hitse value%identityAlignment
A2XBN5 Non-specific lipid-transfer protein 23.9e-1342.86Show/hide
Query:  LSVTVMAMVMVALITGARPADA-VNCNPTEMKACLPAFESSAPPTAECCEKVKEQEPCFCAYLKSPALKPYLESPNAKKISSSCGVAFPTC
        L+V V+A+ MVA   G     A  +CN  ++  C  A    A PTA CC  ++ Q+ CFC + K P    Y+ SPNA+K  SSCG+A PTC
Subjt:  LSVTVMAMVMVALITGARPADA-VNCNPTEMKACLPAFESSAPPTAECCEKVKEQEPCFCAYLKSPALKPYLESPNAKKISSSCGVAFPTC

P82353 Non-specific lipid-transfer protein 26.4e-1648.53Show/hide
Query:  VNCNPTEMKACLPAFESSAPPTAECCEKVKEQEPCFCAYLKSPALKPYLESPNAKKISSSCGVAFPTC
        V C+P ++  CL    S AP    CC+K++EQ PC C YLK+P+L+ Y+ SPNA+K++S+CGV  P C
Subjt:  VNCNPTEMKACLPAFESSAPPTAECCEKVKEQEPCFCAYLKSPALKPYLESPNAKKISSSCGVAFPTC

P86809 Non-specific lipid-transfer protein 22.7e-1453.23Show/hide
Query:  CNPTEMKACLPAFESSAPPTAECCEKVKEQEPCFCAYLKSPALKPYLESPNAKKISSSCGVA
        C+  ++  CL A   + PP+A CC K+KEQ+PC C YLK P LK Y+ SP A+K +SSCGVA
Subjt:  CNPTEMKACLPAFESSAPPTAECCEKVKEQEPCFCAYLKSPALKPYLESPNAKKISSSCGVA

Q10ST8 Non-specific lipid-transfer protein 25.0e-1342.86Show/hide
Query:  LSVTVMAMVMVALITGARPADA-VNCNPTEMKACLPAFESSAPPTAECCEKVKEQEPCFCAYLKSPALKPYLESPNAKKISSSCGVAFPTC
        L+V V+A+ MVA   G     A   CN  ++  C  A    A PTA CC  ++ Q+ CFC + K P    Y+ SPNA+K  SSCG+A PTC
Subjt:  LSVTVMAMVMVALITGARPADA-VNCNPTEMKACLPAFESSAPPTAECCEKVKEQEPCFCAYLKSPALKPYLESPNAKKISSSCGVAFPTC

Q43681 Probable non-specific lipid-transfer protein AKCS94.7e-1944.9Show/hide
Query:  KVSISSLCLSVTVMAMVMVALITGARPADAVNCNPTEMKACLPAFESSAPPTAECCEKVKEQEPCFCAYLKSPALKPYLESPNAKKISSSCGVAFPTC
        K+ +S +C     + +V + LI     A+AV CNPTE+ +C+PA    + P++ CC K+K QEPC C Y+K+P+LK Y+ SP AKK+ S+CGV +P C
Subjt:  KVSISSLCLSVTVMAMVMVALITGARPADAVNCNPTEMKACLPAFESSAPPTAECCEKVKEQEPCFCAYLKSPALKPYLESPNAKKISSSCGVAFPTC

Arabidopsis top hitse value%identityAlignment
AT1G48750.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein2.4e-1840.91Show/hide
Query:  VTVMAMVMVALITGARPADAVNCNPTEMKACLPAFESSAPPTAECCEKVKEQEPCFCAYLKSPALKPYLESPNAKKISSSCGVAFPTC
        V+V+A+    L+     A+ V C+P ++ +C  A  SS+PP+  CC K++EQ+PC C Y+++P L+ Y+ SPNA+K+S+SC +  P+C
Subjt:  VTVMAMVMVALITGARPADAVNCNPTEMKACLPAFESSAPPTAECCEKVKEQEPCFCAYLKSPALKPYLESPNAKKISSSCGVAFPTC

AT1G66850.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein1.8e-1339.47Show/hide
Query:  TGARPADAVNCNPTEMKACLPAFESSAPPTAECCEKVKEQEPCFCAYLKSPALKPYLESPNAKKISSSCGVAFPTC
        TG      V C+  +++ CL A      P+  CC K+ EQ+ C C + K+PA   Y+ SPNA+K+  +C VA+PTC
Subjt:  TGARPADAVNCNPTEMKACLPAFESSAPPTAECCEKVKEQEPCFCAYLKSPALKPYLESPNAKKISSSCGVAFPTC

AT3G18280.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein4.1e-1843.18Show/hide
Query:  VTVMAMVMVALITGARPADAVNCNPTEMKACLPAFESSAPPTAECCEKVKEQEPCFCAYLKSPALKPYLESPNAKKISSSCGVAFPTC
        V++ A+  V L+  A  A+AV C+P ++  C  A  SS+PP+A CC K+KEQ PC C Y+++P+L+ ++ +PNA+K+S SC +  P C
Subjt:  VTVMAMVMVALITGARPADAVNCNPTEMKACLPAFESSAPPTAECCEKVKEQEPCFCAYLKSPALKPYLESPNAKKISSSCGVAFPTC

AT5G38160.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein3.2e-1539.02Show/hide
Query:  VMVALITGARPADAVNCNPTEMKACLPAFESSAPPTAECCEKVKEQEPCFCAYLKSPALKPYLESPNAKKISSSCGVAFPTC
        V   ++ G+     V C+ T++ +C+ A  + APP+ +CC K+KE E C C Y+++P    Y+ SPNA+K  ++C VA+PTC
Subjt:  VMVALITGARPADAVNCNPTEMKACLPAFESSAPPTAECCEKVKEQEPCFCAYLKSPALKPYLESPNAKKISSSCGVAFPTC

AT5G38170.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein2.5e-1545.59Show/hide
Query:  VNCNPTEMKACLPAFESSAPPTAECCEKVKEQEPCFCAYLKSPALKPYLESPNAKKISSSCGVAFPTC
        V C+  ++ +C     +  PP+ ECC K+KEQ+PCFC Y+K P    Y+ S NAKK  ++CGV +PTC
Subjt:  VNCNPTEMKACLPAFESSAPPTAECCEKVKEQEPCFCAYLKSPALKPYLESPNAKKISSSCGVAFPTC


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGAAAGTTTCGATTTCAAGTCTTTGCCTTTCGGTGACCGTGATGGCAATGGTGATGGTGGCGCTTATTACCGGAGCTCGACCGGCAGACGCTGTGAATTGTAACCC
TACGGAGATGAAAGCATGTCTTCCTGCATTCGAATCGTCAGCGCCGCCAACAGCTGAATGCTGTGAGAAAGTGAAAGAGCAAGAGCCATGCTTTTGTGCATACCTGAAAA
GTCCAGCTTTGAAGCCTTATTTAGAATCTCCCAATGCTAAAAAGATTAGTTCTTCTTGTGGCGTTGCCTTCCCCACCTGCTAG
mRNA sequenceShow/hide mRNA sequence
ATGAAGAAAGTTTCGATTTCAAGTCTTTGCCTTTCGGTGACCGTGATGGCAATGGTGATGGTGGCGCTTATTACCGGAGCTCGACCGGCAGACGCTGTGAATTGTAACCC
TACGGAGATGAAAGCATGTCTTCCTGCATTCGAATCGTCAGCGCCGCCAACAGCTGAATGCTGTGAGAAAGTGAAAGAGCAAGAGCCATGCTTTTGTGCATACCTGAAAA
GTCCAGCTTTGAAGCCTTATTTAGAATCTCCCAATGCTAAAAAGATTAGTTCTTCTTGTGGCGTTGCCTTCCCCACCTGCTAG
Protein sequenceShow/hide protein sequence
MKKVSISSLCLSVTVMAMVMVALITGARPADAVNCNPTEMKACLPAFESSAPPTAECCEKVKEQEPCFCAYLKSPALKPYLESPNAKKISSSCGVAFPTC